Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p59760 Brassica napus
Aa31LG7G3460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis
Actinidia04875 Actinidia chinensis
Actinidia04876 Actinidia chinensis
Ah.11g048260 Amaranthus hybridus
Ah.11g048280 Amaranthus hybridus
AL1G31150 Arabidopsis lyrata
Aqoxy3G03462 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4DD1B6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea
AT1G18700 Arabidopsis thaliana
ATR0564G073 Amborella trichopoda
Atru.chr9.198 Acer truncatum
AUR62008439 Chenopodium quinoa
AUR62021651 Chenopodium quinoa
BcaB03g14489 Brassica carinata
BcaC07g41307 Brassica carinata
BolC8t51869H Brassica oleracea
BraA09t41353Z Brassica rapa
C08p43140 Brassica napus
CAN.G479.72 Capsicum annuum
CANSAT80G1745 Cannabis sativa
CARHR019320 Cardamine hirsuta
Carub.0001s1833 Capsella rubella
Ca_14652_v3 Cicer arietinum L.
Ca_14653_v3 Cicer arietinum L.
Cc00_g08360 Coffea canephora
Cc00_g08370 Coffea canephora
CDE02G4120 Ceratophyllum demersum
Cfa018922 Carpinus fangiana
Ciclev10019092m.g Citrus clementina
CiPaw.12G011900 Carya illinoinensis
ClCG06G016050 Citrullus lanatus
COL.COLO4_36922 Corchorus olitorius
Cpa.g.c36787.2 Carica papaya
Cpa.g.sc341.2 Carica papaya
Cpa.g.sc3599.1 Carica papaya
Cre02.g118450 Chlamydomonas reinhardtii
CsaV3_1G002500 Cucumis sativus L.
CSS0002973 Camellia sinensis var. sinensis
CSS0005828 Camellia sinensis var. sinensis
CSS0009827 Camellia sinensis var. sinensis
CSS0010493 Camellia sinensis var. sinensis
CSS0011657 Camellia sinensis var. sinensis
CSS0018594 Camellia sinensis var. sinensis
CSS0027371 Camellia sinensis var. sinensis
CSS0033275 Camellia sinensis var. sinensis
CSS0033804 Camellia sinensis var. sinensis
CSS0034852 Camellia sinensis var. sinensis
CSS0048671 Camellia sinensis var. sinensis
DCAR_010367 Daucus carota
Dinv38737 Davidia involucrata
Duzib068G0813 Durio zibethinus
Duzib205G0738 Durio zibethinus
ECA246G0122 Erigeron canadensis
EL10Ac5g11047 Beta vulgaris
Eucgr.B00530 Eucalyptus grandis
FAN08G0610 Fragaria x ananassa
FAN13G1597 Fragaria x ananassa
FAN18G0140 Fragaria x ananassa
FvH4_5g14650 Fragaria vesca
Glyma.06G195700 Glycine max
Gohir.A03G067500 Gossypium hirsutum
Gohir.D03G094000 Gossypium hirsutum
Gorai.003G098100 Gossypium raimondii
GSVIVG01007980001 Vitis vinifera
HanXRQChr05g0154901 Helianthus annuus
Haze_07305 Corylus avellana
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla
HPP92_019730 Vanilla planifolia
HPP92_019783 Vanilla planifolia
Hund02633 Selenicereus undatus
Lalb_Chr08g0235571 Lupinus albus
Lj1g0024661 Lotus japonicus
Lj2g0020469 Lotus japonicus
Lj4g0017943 Lotus japonicus
Lj5A108G55 Lonicera japonica
Lj5A108T60 Lonicera japonica
Lsat_1_v5_gn_5_21460 Lactuca sativa
Manes.14G080700 Manihot esculenta
Mapoly0021s0150 Marchantia polymorpha
MBI02_g20482_MAGBIO Magnolia biondii
MBI05_g10671_MAGBIO Magnolia biondii
MD06G1196700 Malus domestica
MD14G1127800 Malus domestica
MD14G1203300 Malus domestica
MD14G1203400 Malus domestica
MD14G1203500 Malus domestica
Medtr3g435140 Medicago truncatula
MELO3C017186.2 Cucumis melo
Migut.I00201 Erythranthe guttata
Nitab4.5_0001211g0300 Nicotiana tabacum
Nitab4.5_0005900g0110 Nicotiana tabacum
Nn4g23237 Nelumbo nucifera
Oeu052444.1 Olea europaea
Oeu052445.1 Olea europaea
Oeu052446.1 Olea europaea
Os07g0632600 Oryza sativa ssp. japonica
Peaxi162Scf00274g00452 Petunia axillaris
PGR083G0417 Punica granatum
PGSC0003DMG400019522 Solanum tuberosum
Phvul.009G185900 Phaseolus vulgaris
Potri.017G112200 Populus trichocarpa
Pp3c17_15290 Physcomitrium patens
PRCOL_00003726 Prasinoderma coloniale
Prupe.5G196200 Prunus persica
Psat5g195480 Pisum sativum
PSO063G2323 Papaver somniferum
PSO832G0806 Papaver somniferum
QL10p017494 Quercus lobata
RcHm_v2.0_Chr7g0181841 Rosa chinensis
Rhsim08G0152800 Rhododendron simsii
Sabra17G0093000 Salix brachista
SalBow5G2872 Salvia bowleyana
Sc12g0006470 Simmondsia chinensis
Sed0001989 Sechium edule
SEGI_05265 Sequoiadendron giganteum
SEGI_06018 Sequoiadendron giganteum
SGA_v2.0_scaffold313G48342 Striga asiatica
SMO009G0002 Selaginella moellendorffii
SMO032G0002 Selaginella moellendorffii
SMO077G0002 Selaginella moellendorffii
SMO077G0009 Selaginella moellendorffii
SMO117G0311 Selaginella moellendorffii
SMO122G0009 Selaginella moellendorffii
SMO174G0213 Selaginella moellendorffii
SMO183G0003 Selaginella moellendorffii
SMO202G0002 Selaginella moellendorffii
SMO212G0008 Selaginella moellendorffii
SMO240G0047 Selaginella moellendorffii
SMO274G0001 Selaginella moellendorffii
SMO274G0004 Selaginella moellendorffii
SMO274G0023 Selaginella moellendorffii
SMO274G0026 Selaginella moellendorffii
SMO286G0020 Selaginella moellendorffii
SMO286G0021 Selaginella moellendorffii
SMO364G0054 Selaginella moellendorffii
Solyc03g115840.4 Solanum lycopersicum
Sopen03g034820 Solanum pennellii
Sopen03g034830 Solanum pennellii
Sp1g16680 Schrenkiella parvula
TAR629G0729 Trochodendron aralioides
TAR629G3124 Trochodendron aralioides
THA.LOC104808258 Tarenaya hassleriana
Thecc.03G092900 Theobroma cacao
Thhalv10006967m.g Eutrema salsugineum
TPR.G11816 Trifolium pratense
TWI81G0545 Tripterygium wilfordii
vmacro17562 Vaccinium macrocarpon
VMungo1309G2345 Vigna mungo
Zm00001eb110080 Zea mays

User provided reference genes

Program Settings