Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18220 Brassica napus
A06p00990 Brassica napus
Aa31LG10G1720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.885 Anthoceros agrestis
Actinidia03618 Actinidia chinensis
Actinidia04619 Actinidia chinensis
Actinidia04620 Actinidia chinensis
Actinidia12604 Actinidia chinensis
Actinidia39420 Actinidia chinensis
Ah.04g164030 Amaranthus hybridus
Ah.06g187690 Amaranthus hybridus
Ah.06g187700 Amaranthus hybridus
AL1G62040 Arabidopsis lyrata
Aqoxy1G01901 Aquilegia oxysepala
Aqoxy1G01902 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7PP38G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DP9AR5 Arachis hypogaea
AT1G53490 Arabidopsis thaliana
ATR0602G050 Amborella trichopoda
Atru.chr2.1937 Acer truncatum
Atru.chr2.1968 Acer truncatum
AUR62019650 Chenopodium quinoa
AUR62039578 Chenopodium quinoa
BcaB02g10917 Brassica carinata
BcaB04g17077 Brassica carinata
BcaB07g33326 Brassica carinata
BcaC01g01394 Brassica carinata
BcaC08g43535 Brassica carinata
BcaC08g44093 Brassica carinata
BolC3t21472H Brassica oleracea
BolC6t36002H Brassica oleracea
BolC6t36675H Brassica oleracea
BraA05t20718Z Brassica rapa
BraA06t23327Z Brassica rapa
BraA08t32205Z Brassica rapa
BraA08t32208Z Brassica rapa
C03p91550 Brassica napus
C06p09250 Brassica napus
C06p14980 Brassica napus
CAN.G68.2 Capsicum annuum
CANSAT56G3173 Cannabis sativa
CARHR043720 Cardamine hirsuta
Carub.0001s4267 Capsella rubella
Ca_22302_v3 Cicer arietinum L.
Cc05_g10710 Coffea canephora
CDE02G3773 Ceratophyllum demersum
CDE06G2539 Ceratophyllum demersum
Cfa019516 Carpinus fangiana
Ciclev10016084m.g Citrus clementina
CiPaw.11G155900 Carya illinoinensis
CiPaw.12G110800 Carya illinoinensis
ClCG07G010130 Citrullus lanatus
COL.COLO4_17473 Corchorus olitorius
Cpa.g.sc77.62 Carica papaya
Cre03.g161500 Chlamydomonas reinhardtii
CsaV3_4G008200 Cucumis sativus L.
CSS0037390 Camellia sinensis var. sinensis
CSS0040857 Camellia sinensis var. sinensis
CSS0048020 Camellia sinensis var. sinensis
DCAR_013348 Daucus carota
DCAR_021040 Daucus carota
Dinv13363 Davidia involucrata
Dinv26707 Davidia involucrata
Duzib213G0278 Durio zibethinus
ECA236G3615 Erigeron canadensis
EL10Ac4g08417 Beta vulgaris
Eucgr.F03234 Eucalyptus grandis
FAN11G3801 Fragaria x ananassa
FAN16G2451 Fragaria x ananassa
FAN25G1946 Fragaria x ananassa
FvH4_3g17740 Fragaria vesca
Glyma.09G099300 Glycine max
Glyma.15G209600 Glycine max
Gohir.A11G289500 Gossypium hirsutum
Gohir.D01G038350 Gossypium hirsutum
Gohir.D11G302900 Gossypium hirsutum
Gorai.002G047100 Gossypium raimondii
Gorai.007G331800 Gossypium raimondii
GSVIVG01014096001 Vitis vinifera
HanXRQChr15g0492381 Helianthus annuus
Haze_09248 Corylus avellana
Hma1.2p1_0050F.1_g028780 Hydrangea macrophylla
Hma1.2p1_0325F.1_g125830 Hydrangea macrophylla
Hund08843 Selenicereus undatus
Lalb_Chr19g0133711 Lupinus albus
Lj1A824T63 Lonicera japonica
Lj3g0009226 Lotus japonicus
Lsat_1_v5_gn_7_101801 Lactuca sativa
Manes.03G079300 Manihot esculenta
Manes.15G098600 Manihot esculenta
Mapoly0001s0250 Marchantia polymorpha
MBI06_g08516_MAGBIO Magnolia biondii
MCO09G350 Micromonas commoda
MD03G1247600 Malus domestica
MD11G1269900 Malus domestica
Medtr8g054400 Medicago truncatula
MELO3C016116.2 Cucumis melo
Migut.H02024 Erythranthe guttata
MSTRG.12860 Avicennia marina
Nitab4.5_0000092g0360 Nicotiana tabacum
Nitab4.5_0000348g0050 Nicotiana tabacum
Nitab4.5_0012258g0020 Nicotiana tabacum
Nn6g34422 Nelumbo nucifera
Oeu010032.1 Olea europaea
Oeu050672.1 Olea europaea
Os02g0232100 Oryza sativa ssp. japonica
Peaxi162Scf00000g00758 Petunia axillaris
Peaxi162Scf00000g00759 Petunia axillaris
Peaxi162Scf00111g01325 Petunia axillaris
PGR031G0266 Punica granatum
PGSC0003DMG400013718 Solanum tuberosum
Phvul.011G168700 Phaseolus vulgaris
Potri.001G383900 Populus trichocarpa
Potri.011G104500 Populus trichocarpa
Pp3c8_15890 Physcomitrium patens
Prupe.4G156500 Prunus persica
Psat4g157000 Pisum sativum
PSO541G3766 Papaver somniferum
PSO675G6346 Papaver somniferum
QL08p024163 Quercus lobata
RcHm_v2.0_Chr5g0029521 Rosa chinensis
Rhsim06G0211800 Rhododendron simsii
RhsimUnG0206700 Rhododendron simsii
Sabra11G0075300 Salix brachista
Sabra11G0075500 Salix brachista
Sabra11G0075900 Salix brachista
Sabra11G0076300 Salix brachista
Sabra11G0076400 Salix brachista
Sabra11G0081100 Salix brachista
Sabra16G0252900 Salix brachista
Sc03g0010710 Simmondsia chinensis
Sc07g0002380 Simmondsia chinensis
Sc07g0002390 Simmondsia chinensis
Sed0005766 Sechium edule
Sed0011117 Sechium edule
SEGI_00597 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39765 Striga asiatica
Solyc08g015770.4 Solanum lycopersicum
Sopen08g005940 Solanum pennellii
Sp1g40020 Schrenkiella parvula
TAR624G0400 Trochodendron aralioides
THA.LOC104822577 Tarenaya hassleriana
Thecc.07G132900 Theobroma cacao
Thhalv10011691m.g Eutrema salsugineum
TPR.G16482 Trifolium pratense
TWI38G0400 Tripterygium wilfordii
TWI38G0408 Tripterygium wilfordii
unitig_746.g26835 Utricularia gibba
vmacro11972 Vaccinium macrocarpon
VMungo1127G0687 Vigna mungo
Zm00001eb046150 Zea mays
Zm00001eb164550 Zea mays
Zm00001eb239370 Zea mays
Zm00001eb337320 Zea mays
Zm00001eb352830 Zea mays
Zm00001eb358190 Zea mays

User provided reference genes

Program Settings