Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05700 Brassica napus
A03p09560 Brassica napus
Aa31LG7G13160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis
Actinidia22026 Actinidia chinensis
Actinidia40436 Actinidia chinensis
Ah.06g193310 Amaranthus hybridus
AL6G31140 Arabidopsis lyrata
Aqoxy1G00174 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea
AT5G19630 Arabidopsis thaliana
ATR0605G157 Amborella trichopoda
Atru.chr3.2431 Acer truncatum
Atru.chr3.2436 Acer truncatum
AUR62000051 Chenopodium quinoa
AUR62019223 Chenopodium quinoa
BcaB01g04838 Brassica carinata
BcaB05g23400 Brassica carinata
BcaC03g13695 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus
BolC2t06975H Brassica oleracea
BolC3t13583H Brassica oleracea
BraA02t05522Z Brassica rapa
BraA03t10273Z Brassica rapa
C03p11130 Brassica napus
CAN.G364.5 Capsicum annuum
CAN.G649.13 Capsicum annuum
CANSAT54G0070 Cannabis sativa
CARHR193280 Cardamine hirsuta
Carub.0006s1798 Capsella rubella
Ca_11410_v3 Cicer arietinum L.
Cc01_g03800 Coffea canephora
Cc06_g16050 Coffea canephora
CDE10G0673 Ceratophyllum demersum
Cfa009658 Carpinus fangiana
Cfa026991 Carpinus fangiana
Ciclev10016541m.g Citrus clementina
CiPaw.13G168500 Carya illinoinensis
ClCG03G013670 Citrullus lanatus
COL.COLO4_10392 Corchorus olitorius
Cpa.g.sc117.1 Carica papaya
CsaV3_1G042380 Cucumis sativus L.
CSS0002150 Camellia sinensis var. sinensis
DCAR_003213 Daucus carota
Dinv08060 Davidia involucrata
Dinv15836 Davidia involucrata
Dinv29042 Davidia involucrata
Dinv36316 Davidia involucrata
Duzib150G1219 Durio zibethinus
Duzib168G2110 Durio zibethinus
Duzib170G0131 Durio zibethinus
ECA247G2042 Erigeron canadensis
EL10Ac4g10324 Beta vulgaris
Eucgr.B03647 Eucalyptus grandis
Eucgr.L01569 Eucalyptus grandis
FAN11G2375 Fragaria x ananassa
FAN16G2726 Fragaria x ananassa
FAN21G3006 Fragaria x ananassa
FAN25G1145 Fragaria x ananassa
FvH4_3g44090 Fragaria vesca
Glyma.18G020100 Glycine max
Glyma.20G247000 Glycine max
Gohir.A05G066748 Gossypium hirsutum
Gohir.A13G214800 Gossypium hirsutum
Gohir.D05G069500 Gossypium hirsutum
Gorai.009G070500 Gossypium raimondii
Gorai.013G249300 Gossypium raimondii
GSVIVG01025354001 Vitis vinifera
HanXRQChr10g0300701 Helianthus annuus
Haze_23028 Corylus avellana
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla
HPP92_022782 Vanilla planifolia
Hund07554 Selenicereus undatus
Hund21659 Selenicereus undatus
Lalb_Chr02g0144411 Lupinus albus
Lalb_Chr06g0164501 Lupinus albus
Lj2C370G0 Lonicera japonica
Lj5g0001870 Lotus japonicus
Lju124A28T33 Lonicera japonica
Lsat_1_v5_gn_9_26700 Lactuca sativa
Manes.06G169600 Manihot esculenta
Manes.08G045900 Manihot esculenta
Manes.08G046200 Manihot esculenta
Manes.10G126700 Manihot esculenta
Manes.14G015500 Manihot esculenta
Mapoly0046s0043 Marchantia polymorpha
MBI01_g33892_MAGBIO Magnolia biondii
MCO08G354 Micromonas commoda
MD03G1017500 Malus domestica
MD03G1017600 Malus domestica
MD03G1018200 Malus domestica
MD03G1018500 Malus domestica
MD03G1115900 Malus domestica
MD11G1019500 Malus domestica
Medtr8g092560 Medicago truncatula
MELO3C015673.2 Cucumis melo
Migut.K00041 Erythranthe guttata
MSTRG.26088 Avicennia marina
Nitab4.5_0000324g0230 Nicotiana tabacum
Nitab4.5_0001146g0120 Nicotiana tabacum
Nitab4.5_0003890g0030 Nicotiana tabacum
Nitab4.5_0013751g0010 Nicotiana tabacum
Nn2g15650 Nelumbo nucifera
Nn7g36023 Nelumbo nucifera
Os02g0717100 Oryza sativa ssp. japonica
Peaxi162Scf00258g00313 Petunia axillaris
Peaxi162Scf00403g00114 Petunia axillaris
PGR102G0099 Punica granatum
PGSC0003DMG400032153 Solanum tuberosum
PGSC0003DMG400033344 Solanum tuberosum
Phvul.007G003200 Phaseolus vulgaris
Potri.001G013700 Populus trichocarpa
Potri.003G212400 Populus trichocarpa
Potri.006G191700 Populus trichocarpa
Potri.T056064 Populus trichocarpa
Pp3c25_340 Physcomitrium patens
Pp3c7_25270 Physcomitrium patens
PRCOL_00002610 Prasinoderma coloniale
PRCOL_00006777 Prasinoderma coloniale
Prupe.6G018000 Prunus persica
Psat2g056640 Pisum sativum
Psat6g242840 Pisum sativum
PSO339G6590 Papaver somniferum
QL01p009119 Quercus lobata
RcHm_v2.0_Chr1g0343461 Rosa chinensis
RcHm_v2.0_Chr5g0080391 Rosa chinensis
RcHm_v2.0_Chr5g0080421 Rosa chinensis
Sabra01G0010100 Salix brachista
Sabra03G0155400 Salix brachista
Sabra03G0158600 Salix brachista
Sabra16G0026900 Salix brachista
SalBow1G8278 Salvia bowleyana
SalBow1G8507 Salvia bowleyana
Sc09g0000410 Simmondsia chinensis
Sed0023233 Sechium edule
SEGI_09892 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28426 Striga asiatica
SHI30529 Sapria himalayana
SMO117G0218 Selaginella moellendorffii
Solyc01g006480.3 Solanum lycopersicum
Solyc03g063290.3 Solanum lycopersicum
Sopen01g002460 Solanum pennellii
Sopen03g015850 Solanum pennellii
Sp6g24760 Schrenkiella parvula
TAR633G2590 Trochodendron aralioides
TAR636G0496 Trochodendron aralioides
THA.LOC104811123 Tarenaya hassleriana
Thecc.09G219100 Theobroma cacao
Thhalv10014585m.g Eutrema salsugineum
TPR.G32598 Trifolium pratense
TWI60G0418 Tripterygium wilfordii
unitig_0.g767 Utricularia gibba
vmacro07926 Vaccinium macrocarpon
VMungo0720G2032 Vigna mungo
Zm00001eb252760 Zea mays

User provided reference genes

Program Settings