Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23620 Brassica napus
A07p26630 Brassica napus
A07p45300 Brassica napus
Aa31LG4G630 Aethionema arabicum
Actinidia08826 Actinidia chinensis
Actinidia16015 Actinidia chinensis
Ah.01g021080 Amaranthus hybridus
AL2G41140 Arabidopsis lyrata
AL5G13060 Arabidopsis lyrata
Aqoxy7G01886 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08G0EU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3I1ZSD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UVA1XC Arachis hypogaea
AT1G80360 Arabidopsis thaliana
ATR0071G006 Amborella trichopoda
AUR62011602 Chenopodium quinoa
AUR62016417 Chenopodium quinoa
BcaB02g07280 Brassica carinata
BcaB02g08691 Brassica carinata
BcaB05g25274 Brassica carinata
BcaC03g15980 Brassica carinata
BcaC05g29157 Brassica carinata
BcaC08g45305 Brassica carinata
BcaC08g47581 Brassica carinata
BolC2t09749H Brassica oleracea
BolC3t14325H Brassica oleracea
BolC5t34080H Brassica oleracea
BolC6t38073H Brassica oleracea
BolC6t40428H Brassica oleracea
BraA02t07355Z Brassica rapa
BraA07t30306Z Brassica rapa
BraA07t32034Z Brassica rapa
C02p30770 Brassica napus
C02p37380 Brassica napus
C05p54140 Brassica napus
C06p29100 Brassica napus
C06p54160 Brassica napus
CAN.G438.43 Capsicum annuum
CANSAT25G3819 Cannabis sativa
CANSAT35G0283 Cannabis sativa
CARHR074150 Cardamine hirsuta
Carub.0002s2721 Capsella rubella
Ca_20414_v3 Cicer arietinum L.
Cc04_g03660 Coffea canephora
CDE01G0614 Ceratophyllum demersum
Cfa002045 Carpinus fangiana
Ciclev10025775m.g Citrus clementina
CiPaw.01G241200 Carya illinoinensis
CiPaw.02G153000 Carya illinoinensis
ClCG09G002390 Citrullus lanatus
COL.COLO4_30318 Corchorus olitorius
Cpa.g.sc18.109 Carica papaya
Cre01.g051800 Chlamydomonas reinhardtii
CsaV3_7G032920 Cucumis sativus L.
CSS0021419 Camellia sinensis var. sinensis
CSS0027866 Camellia sinensis var. sinensis
DCAR_016232 Daucus carota
Dinv30207 Davidia involucrata
Dinv30209 Davidia involucrata
Dinv30538 Davidia involucrata
Dinv38068 Davidia involucrata
Duzib235G0952 Durio zibethinus
ECA232G0480 Erigeron canadensis
EL10Ac9g21973 Beta vulgaris
Eucgr.F02571 Eucalyptus grandis
FAN02G0624 Fragaria x ananassa
FAN05G1321 Fragaria x ananassa
FAN09G1585 Fragaria x ananassa
FAN14G5909 Fragaria x ananassa
FvH4_6g31270 Fragaria vesca
Glyma.13G361500 Glycine max
Glyma.15G012300 Glycine max
Gohir.A05G126900 Gossypium hirsutum
Gohir.D05G127800 Gossypium hirsutum
Gorai.009G132000 Gossypium raimondii
GSVIVG01017171001 Vitis vinifera
GSVIVG01035717001 Vitis vinifera
HanXRQChr05g0140511 Helianthus annuus
HanXRQChr16g0500731 Helianthus annuus
Haze_16466 Corylus avellana
Hma1.2p1_0682F.1_g202560 Hydrangea macrophylla
HPP92_000674 Vanilla planifolia
Hund00582 Selenicereus undatus
Hund06596 Selenicereus undatus
Lalb_Chr04g0262581 Lupinus albus
Lalb_Chr25g0279581 Lupinus albus
Lj3g0021181 Lotus japonicus
Lj5A64T48 Lonicera japonica
Lj9C505T11 Lonicera japonica
Lsat_1_v5_gn_4_104321 Lactuca sativa
Manes.04G120500 Manihot esculenta
Manes.11G050800 Manihot esculenta
Mapoly0192s0009 Marchantia polymorpha
MBI04_g11925_MAGBIO Magnolia biondii
MBI04_g47371_MAGBIO Magnolia biondii
MD09G1216600 Malus domestica
MD17G1198700 Malus domestica
Medtr4g011820 Medicago truncatula
MELO3C001121.2 Cucumis melo
MELO3C023373.2 Cucumis melo
Migut.D01039 Erythranthe guttata
MSTRG.4725 Avicennia marina
Nitab4.5_0002424g0030 Nicotiana tabacum
Nitab4.5_0005784g0020 Nicotiana tabacum
Nn2g11851 Nelumbo nucifera
Nn8g39301 Nelumbo nucifera
Oeu006803.1 Olea europaea
Oeu021953.1 Olea europaea
Os01g0178000 Oryza sativa ssp. japonica
Peaxi162Scf00015g00230 Petunia axillaris
PGR102G0607 Punica granatum
PGSC0003DMG400041984 Solanum tuberosum
Phvul.005G173300 Phaseolus vulgaris
Potri.001G177000 Populus trichocarpa
Pp3c20_8270 Physcomitrium patens
Prupe.3G075300 Prunus persica
Psat7g253520 Pisum sativum
PSO063G6298 Papaver somniferum
PSO782G4365 Papaver somniferum
QL05p025707 Quercus lobata
RcHm_v2.0_Chr2g0137261 Rosa chinensis
Rhsim06G0149600 Rhododendron simsii
Rhsim12G0195700 Rhododendron simsii
Sabra01G0149200 Salix brachista
SalBow2G0681 Salvia bowleyana
Sc10g0005480 Simmondsia chinensis
Sed0000376 Sechium edule
Sed0004608 Sechium edule
SEGI_40049 Sequoiadendron giganteum
SEGI_40969 Sequoiadendron giganteum
SGA_v2.0_scaffold279G46822 Striga asiatica
SHI09705 Sapria himalayana
SMO196G0040 Selaginella moellendorffii
Solyc03g120450.4 Solanum lycopersicum
Sopen03g039330 Solanum pennellii
Sp5g35450 Schrenkiella parvula
TAR383G0533 Trochodendron aralioides
TAR383G0670 Trochodendron aralioides
TAR625G1470 Trochodendron aralioides
TAR626G0416 Trochodendron aralioides
THA.LOC104808212 Tarenaya hassleriana
Thecc.06G081300 Theobroma cacao
Thecc.09G144900 Theobroma cacao
Thhalv10018674m.g Eutrema salsugineum
TPR.G27507 Trifolium pratense
TWI18G0273 Tripterygium wilfordii
unitig_62.g23774 Utricularia gibba
vmacro05442 Vaccinium macrocarpon
vmacro16935 Vaccinium macrocarpon
vmacro16936 Vaccinium macrocarpon
vmacro16938 Vaccinium macrocarpon
VMungo1080G0743 Vigna mungo
VMungo1127G2122 Vigna mungo
Zm00001eb122460 Zea mays
Zm00001eb149140 Zea mays
Zm00001eb336900 Zea mays

User provided reference genes

Program Settings