Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05310 Brassica napus
A03p09410 Brassica napus
A03p34500 Brassica napus
A05p41930 Brassica napus
A10p20440 Brassica napus
Aa31LG11G10450 Aethionema arabicum
Aa31LG5G16560 Aethionema arabicum
Actinidia23502 Actinidia chinensis
Actinidia36986 Actinidia chinensis
AL3G16910 Arabidopsis lyrata
AL6G30640 Arabidopsis lyrata
Aqoxy2G03294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6BH6U4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NGDM9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3SWUI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7T279 Arachis hypogaea
AT3G06070 Arabidopsis thaliana
AT5G19190 Arabidopsis thaliana
ATR0564G302 Amborella trichopoda
Atru.chr4.2536 Acer truncatum
AUR62038192 Chenopodium quinoa
BcaB01g04872 Brassica carinata
BcaB01g05138 Brassica carinata
BcaB04g19218 Brassica carinata
BcaB04g19219 Brassica carinata
BcaB04g21321 Brassica carinata
BcaB05g23377 Brassica carinata
BcaB08g36595 Brassica carinata
BcaC01g04322 Brassica carinata
BcaC03g13650 Brassica carinata
BcaC04g18589 Brassica carinata
BcaC05g30060 Brassica carinata
BcaC09g47874 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02720 Brassica napus
BolC1t05639H Brassica oleracea
BolC2t06944H Brassica oleracea
BolC3t13568H Brassica oleracea
BolC3t16478H Brassica oleracea
BraA01t04453Z Brassica rapa
BraA02t05489Z Brassica rapa
BraA03t10259Z Brassica rapa
BraA03t12627Z Brassica rapa
BraA10t44114Z Brassica rapa
C03p10990 Brassica napus
C03p41960 Brassica napus
C05p61180 Brassica napus
C09p57070 Brassica napus
CANSAT78G0872 Cannabis sativa
CARHR080580 Cardamine hirsuta
CARHR193760 Cardamine hirsuta
Carub.0003s0551 Capsella rubella
Carub.0006s1752 Capsella rubella
Ca_00631_v3 Cicer arietinum L.
Cc03_g03270 Coffea canephora
Cfa015601 Carpinus fangiana
Ciclev10006235m.g Citrus clementina
CiPaw.01G161500 Carya illinoinensis
CiPaw.02G093500 Carya illinoinensis
ClCG05G005340 Citrullus lanatus
COL.COLO4_11008 Corchorus olitorius
COL.COLO4_26631 Corchorus olitorius
Cpa.g.sc147.16 Carica papaya
CsaV3_3G013590 Cucumis sativus L.
DCAR_002402 Daucus carota
DCAR_027181 Daucus carota
DCAR_030605 Daucus carota
Dinv38408 Davidia involucrata
Duzib147G1031 Durio zibethinus
Duzib187G0357 Durio zibethinus
Duzib264G0758 Durio zibethinus
EL10As3g23294 Beta vulgaris
Eucgr.B01119 Eucalyptus grandis
FAN07G1591 Fragaria x ananassa
FAN12G3688 Fragaria x ananassa
FAN22G2275 Fragaria x ananassa
FvH4_4g14800 Fragaria vesca
Glyma.07G258100 Glycine max
Glyma.13G207100 Glycine max
Glyma.15G105500 Glycine max
Glyma.17G015900 Glycine max
Gohir.A02G135400 Gossypium hirsutum
Gohir.A10G084407 Gossypium hirsutum
Gohir.D03G046400 Gossypium hirsutum
Gohir.D10G104100 Gossypium hirsutum
Gorai.003G047400 Gossypium raimondii
Gorai.011G113700 Gossypium raimondii
GSVIVG01017906001 Vitis vinifera
HanXRQChr10g0311131 Helianthus annuus
HanXRQChr12g0359551 Helianthus annuus
Haze_00944 Corylus avellana
Hma1.2p1_0995F.1_g245790 Hydrangea macrophylla
HPP92_000387 Vanilla planifolia
HPP92_003158 Vanilla planifolia
Lalb_Chr15g0087411 Lupinus albus
Lalb_Chr18g0056181 Lupinus albus
Lj4g0022767 Lotus japonicus
Lj6g0025020 Lotus japonicus
Lsat_1_v5_gn_5_74361 Lactuca sativa
Manes.03G182700 Manihot esculenta
Manes.15G024700 Manihot esculenta
MBI17_g27868_MAGBIO Magnolia biondii
MBI17_g29941_MAGBIO Magnolia biondii
MBI19_g16320_MAGBIO Magnolia biondii
MBI19_g46840_MAGBIO Magnolia biondii
MD13G1185600 Malus domestica
Medtr2g022610 Medicago truncatula
Medtr4g131720 Medicago truncatula
Migut.G00305 Erythranthe guttata
Migut.N00157 Erythranthe guttata
MSTRG.10006 Avicennia marina
Nitab4.5_0000630g0080 Nicotiana tabacum
Nitab4.5_0015975g0010 Nicotiana tabacum
Nn1g02189 Nelumbo nucifera
Oeu042788.1 Olea europaea
Peaxi162Scf00134g00214 Petunia axillaris
Peaxi162Scf00134g02026 Petunia axillaris
PGR142G2632 Punica granatum
PGSC0003DMG400008993 Solanum tuberosum
Phvul.003G091400 Phaseolus vulgaris
Phvul.006G151900 Phaseolus vulgaris
Potri.008G204100 Populus trichocarpa
Prupe.1G153300 Prunus persica
Psat1g182680 Pisum sativum
Psat4g008520 Pisum sativum
PSO170G6030 Papaver somniferum
PSO302G0161 Papaver somniferum
QL06p003781 Quercus lobata
RcHm_v2.0_Chr4g0417511 Rosa chinensis
Rhsim04G0203400 Rhododendron simsii
Sabra08G0157600 Salix brachista
SalBow2G2333 Salvia bowleyana
Sc19g0004420 Simmondsia chinensis
Sed0015868 Sechium edule
Sed0027149 Sechium edule
SGA_v2.0_scaffold39G15310 Striga asiatica
SGA_v2.0_scaffold39G15314 Striga asiatica
Solyc01g079830.3 Solanum lycopersicum
Sp3g05020 Schrenkiella parvula
Sp6g25190 Schrenkiella parvula
TAR636G3528 Trochodendron aralioides
THA.LOC104818805 Tarenaya hassleriana
THA.LOC104822307 Tarenaya hassleriana
Thecc.01G113400 Theobroma cacao
Thecc.04G224700 Theobroma cacao
Thhalv10014937m.g Eutrema salsugineum
Thhalv10021691m.g Eutrema salsugineum
TPR.G36993 Trifolium pratense
TPR.G912 Trifolium pratense
TWI09G0501 Tripterygium wilfordii
TWI73G0302 Tripterygium wilfordii
unitig_32.g11733 Utricularia gibba
unitig_736.g22489 Utricularia gibba
unitig_748.g8553 Utricularia gibba
unitig_899.g14848 Utricularia gibba
VMungo0540G1940 Vigna mungo
VMungo1215G1766 Vigna mungo

User provided reference genes

Program Settings