Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p11210 Brassica napus
A09p39550 Brassica napus
Aa31LG1G21410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis
Actinidia08860 Actinidia chinensis
Actinidia36796 Actinidia chinensis
Ah.11g044960 Amaranthus hybridus
AL6G13430 Arabidopsis lyrata
Aqoxy3G01456 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea
AT5G03860 Arabidopsis thaliana
ATR0824G173 Amborella trichopoda
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum
AUR62025866 Chenopodium quinoa
AUR62029660 Chenopodium quinoa
BcaB01g05780 Brassica carinata
BcaB05g21798 Brassica carinata
BcaC08g44622 Brassica carinata
BolC2t06123H Brassica oleracea
BolC6t37284H Brassica oleracea
BraA01t01659Z Brassica rapa
BraA02t04789Z Brassica rapa
C02p01580 Brassica napus
C06p20980 Brassica napus
C06p36560 Brassica napus
CAN.G352.42 Capsicum annuum
CAN.G352.43 Capsicum annuum
CANSAT11G0344 Cannabis sativa
CARHR209400 Cardamine hirsuta
Carub.0006s0280 Capsella rubella
Ca_03499_v3 Cicer arietinum L.
Ca_23552_v3 Cicer arietinum L.
Ca_23555_v3 Cicer arietinum L.
Ca_28596_v3 Cicer arietinum L.
Ca_29801_v3 Cicer arietinum L.
CBR_g26132 Chara braunii
Cc04_g10080 Coffea canephora
CDE08G1017 Ceratophyllum demersum
CDE09G0730 Ceratophyllum demersum
Cfa018868 Carpinus fangiana
Ciclev10019499m.g Citrus clementina
CiPaw.11G010700 Carya illinoinensis
ClCG03G003600 Citrullus lanatus
COL.COLO4_28061 Corchorus olitorius
Cpa.g.sc4.107 Carica papaya
Cre03.g144807 Chlamydomonas reinhardtii
CsaV3_1G009520 Cucumis sativus L.
CSS0001791 Camellia sinensis var. sinensis
DCAR_016413 Daucus carota
Dinv04852 Davidia involucrata
Dinv11097 Davidia involucrata
Duzib068G0556 Durio zibethinus
Duzib205G1411 Durio zibethinus
ECA246G0215 Erigeron canadensis
EL10As4g23460 Beta vulgaris
Eucgr.K02748 Eucalyptus grandis
FAN04G1296 Fragaria x ananassa
FAN08G1582 Fragaria x ananassa
FAN13G0009 Fragaria x ananassa
FAN18G1141 Fragaria x ananassa
FvH4_5g07710 Fragaria vesca
Glyma.05G045851 Glycine max
Glyma.05G045900 Glycine max
Glyma.17G128000 Glycine max
Glyma.17G128100 Glycine max
Glyma.19G088650 Glycine max
Gohir.A07G053000 Gossypium hirsutum
Gohir.D07G057400 Gossypium hirsutum
Gorai.001G060900 Gossypium raimondii
GSVIVG01008494001 Vitis vinifera
HanXRQChr05g0154041 Helianthus annuus
Haze_07250 Corylus avellana
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla
HPP92_023361 Vanilla planifolia
HPP92_023371 Vanilla planifolia
Hund10205 Selenicereus undatus
Lalb_Chr07g0183271 Lupinus albus
Lj4g0028142 Lotus japonicus
Lj5C97G9 Lonicera japonica
Lsat_1_v5_gn_5_13501 Lactuca sativa
Manes.14G054100 Manihot esculenta
Mapoly0154s0035 Marchantia polymorpha
MBI11_g05409_MAGBIO Magnolia biondii
MD06G1147700 Malus domestica
MD14G1161700 Malus domestica
MD14G1161800 Malus domestica
Medtr8g028225 Medicago truncatula
MELO3C002350.2 Cucumis melo
Migut.I00493 Erythranthe guttata
MSTRG.9318 Avicennia marina
Nitab4.5_0001664g0050 Nicotiana tabacum
Nitab4.5_0003680g0030 Nicotiana tabacum
Nn4g22401 Nelumbo nucifera
Oeu044618.1 Olea europaea
Os04g0486950 Oryza sativa ssp. japonica
Peaxi162Scf00089g00419 Petunia axillaris
PGR044G1202 Punica granatum
PGSC0003DMG400015192 Solanum tuberosum
PGSC0003DMG400015194 Solanum tuberosum
PGSC0003DMG401015193 Solanum tuberosum
PGSC0003DMG402015193 Solanum tuberosum
Phvul.003G209101 Phaseolus vulgaris
Phvul.003G209200 Phaseolus vulgaris
Potri.012G094532 Populus trichocarpa
Potri.015G092000 Populus trichocarpa
Pp3c20_22510 Physcomitrium patens
Prupe.5G154600 Prunus persica
Psat4g158240 Pisum sativum
PSO017G1181 Papaver somniferum
PSO478G2802 Papaver somniferum
QL10p004544 Quercus lobata
QL10p004639 Quercus lobata
RcHm_v2.0_Chr7g0190721 Rosa chinensis
Rhsim12G0172800 Rhododendron simsii
Sabra15G0113800 Salix brachista
SalBow1G0228 Salvia bowleyana
SalBow1G0618 Salvia bowleyana
SalBow1G1465 Salvia bowleyana
SalBow1G3079 Salvia bowleyana
SalBow1G3673 Salvia bowleyana
SalBow1G5430 Salvia bowleyana
SalBow1G5822 Salvia bowleyana
SalBow5G3571 Salvia bowleyana
Sc14g0007560 Simmondsia chinensis
Sed0009275 Sechium edule
SEGI_27575 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25701 Striga asiatica
SMO367G0555 Selaginella moellendorffii
Solyc03g111130.1 Solanum lycopersicum
Solyc03g111140.3 Solanum lycopersicum
Sopen03g030270 Solanum pennellii
Sopen03g030280 Solanum pennellii
Sopen03g030290 Solanum pennellii
Sp6g38870 Schrenkiella parvula
TAR374G0737 Trochodendron aralioides
TAR622G1078 Trochodendron aralioides
THA.LOC104825008 Tarenaya hassleriana
Thecc.03G124900 Theobroma cacao
Thhalv10015335m.g Eutrema salsugineum
TPR.G21293 Trifolium pratense
TWI39G0550 Tripterygium wilfordii
unitig_21.g20324 Utricularia gibba
vmacro16662 Vaccinium macrocarpon
VMungo1215G0651 Vigna mungo
VMungo1215G1303 Vigna mungo
VMungo1383G1618 Vigna mungo
Zm00001eb079170 Zea mays

User provided reference genes

Program Settings