Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13930 Brassica napus
Aa31LG2G3480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1317 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1343 Anthoceros agrestis
Actinidia15883 Actinidia chinensis
Actinidia36320 Actinidia chinensis
Ah.16g101760 Amaranthus hybridus
AL2G25440 Arabidopsis lyrata
Aqoxy3G00271 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GG98DF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.INX0GQ Arachis hypogaea
AT1G67080 Arabidopsis thaliana
ATR1125G077 Amborella trichopoda
Atru.chr1.1699 Acer truncatum
AUR62009000 Chenopodium quinoa
AUR62023302 Chenopodium quinoa
BcaB05g24236 Brassica carinata
BcaC03g14797 Brassica carinata
BolC2t08398H Brassica oleracea
BraA02t06454Z Brassica rapa
C02p22440 Brassica napus
CAN.G225.4 Capsicum annuum
CAN.G625.24 Capsicum annuum
CANSAT78G0919 Cannabis sativa
CARHR059530 Cardamine hirsuta
Carub.0002s1337 Capsella rubella
Ca_04048_v3 Cicer arietinum L.
Cc07_g08830 Coffea canephora
CDE06G0519 Ceratophyllum demersum
Ciclev10012575m.g Citrus clementina
ClCG05G011670 Citrullus lanatus
COL.COLO4_09328 Corchorus olitorius
Cpa.g.sc282.10 Carica papaya
Cre03.g207000 Chlamydomonas reinhardtii
Cre06.g255300 Chlamydomonas reinhardtii
CsaV3_3G020700 Cucumis sativus L.
DCAR_017191 Daucus carota
DCAR_025914 Daucus carota
Dinv33946 Davidia involucrata
Duzib133G0419 Durio zibethinus
ECA246G3075 Erigeron canadensis
EL10Ac2g04567 Beta vulgaris
Eucgr.F02495 Eucalyptus grandis
Eucgr.F02496 Eucalyptus grandis
FAN04G3248 Fragaria x ananassa
FAN08G1603 Fragaria x ananassa
FAN13G1234 Fragaria x ananassa
FvH4_5g20670 Fragaria vesca
Glyma.08G365700 Glycine max
Glyma.18G296600 Glycine max
Glyma.19G047800 Glycine max
Gohir.A12G053800 Gossypium hirsutum
Gohir.D12G052500 Gossypium hirsutum
Gorai.008G055600 Gossypium raimondii
GSVIVG01031023001 Vitis vinifera
HanXRQChr12g0376541 Helianthus annuus
HanXRQChr15g0471501 Helianthus annuus
Hma1.2p1_1109F.1_g257990 Hydrangea macrophylla
HPP92_000177 Vanilla planifolia
HPP92_021861 Vanilla planifolia
Hund13716 Selenicereus undatus
Lalb_Chr17g0335881 Lupinus albus
Lalb_Chr21g0317811 Lupinus albus
Lj1g0002546 Lotus japonicus
Lj2A442G45 Lonicera japonica
Lj2g0008970 Lotus japonicus
Lsat_1_v5_gn_3_79761 Lactuca sativa
Manes.02G068600 Manihot esculenta
Mapoly0134s0007 Marchantia polymorpha
MCO01G364 Micromonas commoda
MCO02G342 Micromonas commoda
MCO03G104 Micromonas commoda
MD00G1132400 Malus domestica
MD06G1045600 Malus domestica
MD06G1045700 Malus domestica
MD09G1253000 Malus domestica
Medtr6g018550 Medicago truncatula
Medtr6g025680 Medicago truncatula
Medtr7g007280 Medicago truncatula
MELO3C023805.2 Cucumis melo
Migut.H00217 Erythranthe guttata
Migut.L00317 Erythranthe guttata
MSTRG.15294 Avicennia marina
MSTRG.23575 Avicennia marina
Nitab4.5_0000659g0050 Nicotiana tabacum
Nitab4.5_0000912g0240 Nicotiana tabacum
Nitab4.5_0001217g0030 Nicotiana tabacum
Nitab4.5_0002207g0070 Nicotiana tabacum
Nitab4.5_0002207g0120 Nicotiana tabacum
Nitab4.5_0004398g0030 Nicotiana tabacum
Nitab4.5_0007808g0020 Nicotiana tabacum
Nitab4.5_0009855g0020 Nicotiana tabacum
Nn3g17869 Nelumbo nucifera
Nn4g23871 Nelumbo nucifera
Oeu010266.2 Olea europaea
Os01g0128300 Oryza sativa ssp. japonica
Peaxi162Scf00205g00220 Petunia axillaris
Peaxi162Scf00394g00618 Petunia axillaris
Peaxi162Scf00501g00318 Petunia axillaris
PGR004G1354 Punica granatum
PGSC0003DMG400024184 Solanum tuberosum
PGSC0003DMG401026407 Solanum tuberosum
PGSC0003DMG402019589 Solanum tuberosum
Phvul.004G065900 Phaseolus vulgaris
Phvul.007G143200 Phaseolus vulgaris
Phvul.008G005900 Phaseolus vulgaris
Potri.004G099500 Populus trichocarpa
Potri.017G114900 Populus trichocarpa
Pp3c12_21540 Physcomitrium patens
Pp3c3_37490 Physcomitrium patens
PRCOL_00000440 Prasinoderma coloniale
PRCOL_00000715 Prasinoderma coloniale
PRCOL_00005350 Prasinoderma coloniale
Prupe.3G157500 Prunus persica
Prupe.5G053500 Prunus persica
Psat1g081400 Pisum sativum
Psat3g205360 Pisum sativum
PSO017G3734 Papaver somniferum
PSO478G2919 Papaver somniferum
QL02p051402 Quercus lobata
QL02p051406 Quercus lobata
RcHm_v2.0_Chr7g0206351 Rosa chinensis
Sabra04G0080500 Salix brachista
Sabra17G0095200 Salix brachista
SalBow1G0778 Salvia bowleyana
SalBow3G4509 Salvia bowleyana
SalBow5G5330 Salvia bowleyana
Sed0014747 Sechium edule
Sed0024744 Sechium edule
Sed0027829 Sechium edule
SEGI_37456 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13498 Striga asiatica
SMO356G0314 Selaginella moellendorffii
Solyc02g063170.3 Solanum lycopersicum
Solyc02g086050.3 Solanum lycopersicum
Solyc03g034240.4 Solanum lycopersicum
Sopen02g014240 Solanum pennellii
Sopen02g030740 Solanum pennellii
Sopen03g007020 Solanum pennellii
Sp5g22010 Schrenkiella parvula
TAR371G1203 Trochodendron aralioides
TAR629G3320 Trochodendron aralioides
THA.LOC104805567 Tarenaya hassleriana
Thecc.04G133900 Theobroma cacao
Thhalv10019078m.g Eutrema salsugineum
TPR.G32451 Trifolium pratense
TPR.G9726 Trifolium pratense
TWI53G0853 Tripterygium wilfordii
TWI77G0167 Tripterygium wilfordii
unitig_32.g11889 Utricularia gibba
unitig_748.g8751 Utricularia gibba
vmacro05556 Vaccinium macrocarpon
VMungo0464G1881 Vigna mungo
VMungo1383G0350 Vigna mungo
Zm00001eb125470 Zea mays
Zm00001eb335080 Zea mays

User provided reference genes

Program Settings