Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43620 Brassica napus
A02p43630 Brassica napus
A03p60250 Brassica napus
A04p18380 Brassica napus
Aa31LG2G19730 Aethionema arabicum
Aa31LG3G8690 Aethionema arabicum
Aa31LG7G12770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3886 Anthoceros agrestis
Actinidia24377 Actinidia chinensis
Actinidia24378 Actinidia chinensis
Actinidia38313 Actinidia chinensis
Ah.09g228780 Amaranthus hybridus
AL4G14110 Arabidopsis lyrata
AL7G21430 Arabidopsis lyrata
Aqoxy7G03362 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RJ6BPE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VFXC0H Arachis hypogaea
AT2G24060 Arabidopsis thaliana
AT4G30690 Arabidopsis thaliana
ATR0019G027 Amborella trichopoda
Atru.chr7.16 Acer truncatum
AUR62025348 Chenopodium quinoa
AUR62028351 Chenopodium quinoa
BcaB06g27963 Brassica carinata
BcaB06g27964 Brassica carinata
BcaC02g08501 Brassica carinata
BcaNung02747 Brassica carinata
BcaNung04824 Brassica carinata
BolC1t00805H Brassica oleracea
BolC2t11481H Brassica oleracea
BolC4t26921H Brassica oleracea
BolC7t46275H Brassica oleracea
BraA03t15065Z Brassica rapa
BraA04t17449Z Brassica rapa
C02p54180 Brassica napus
C04p53650 Brassica napus
C06p03190 Brassica napus
C07p58160 Brassica napus
CAN.G160.27 Capsicum annuum
CANSAT11G0185 Cannabis sativa
CARHR118290 Cardamine hirsuta
CARHR238570 Cardamine hirsuta
Carub.0004s0323 Capsella rubella
Carub.0007s0984 Capsella rubella
Ca_21142_v3 Cicer arietinum L.
Ca_21146_v3 Cicer arietinum L.
CBR_g7972 Chara braunii
Cc06_g14700 Coffea canephora
CDE02G3377 Ceratophyllum demersum
CDE05G2888 Ceratophyllum demersum
Cfa020803 Carpinus fangiana
Cfa021053 Carpinus fangiana
Ciclev10009165m.g Citrus clementina
CiPaw.15G165900 Carya illinoinensis
CiPaw.16G107700 Carya illinoinensis
ClCG02G014380 Citrullus lanatus
COL.COLO4_23958 Corchorus olitorius
Cpa.g.sc46.177 Carica papaya
Cre01.g001550 Chlamydomonas reinhardtii
CsaV3_2G007620 Cucumis sativus L.
CSS0044573 Camellia sinensis var. sinensis
CSS0047585 Camellia sinensis var. sinensis
DCAR_017916 Daucus carota
Dinv41359 Davidia involucrata
Dinv42835 Davidia involucrata
Dinv43264 Davidia involucrata
Duzib150G0069 Durio zibethinus
ECA234G3490 Erigeron canadensis
ECA236G1766 Erigeron canadensis
EL10Ac8g18927 Beta vulgaris
Eucgr.C02505 Eucalyptus grandis
FAN23G1872 Fragaria x ananassa
FAN23G2407 Fragaria x ananassa
FAN23G2925 Fragaria x ananassa
FAN26G1928 Fragaria x ananassa
FAN28G2863 Fragaria x ananassa
FvH4_1g00690 Fragaria vesca
Glyma.02G205700 Glycine max
Glyma.04G154000 Glycine max
Glyma.17G072300 Glycine max
Gohir.A07G037900 Gossypium hirsutum
Gohir.D07G042000 Gossypium hirsutum
Gorai.001G044800 Gossypium raimondii
GSVIVG01023642001 Vitis vinifera
HanXRQChr01g0013961 Helianthus annuus
HanXRQChr05g0138951 Helianthus annuus
HanXRQChr10g0307591 Helianthus annuus
Haze_19160 Corylus avellana
Hma1.2p1_0028F.1_g017650 Hydrangea macrophylla
Hma1.2p1_0028F.1_g017670 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093770 Hydrangea macrophylla
HPP92_018341 Vanilla planifolia
Hund08935 Selenicereus undatus
Lalb_Chr12g0198781 Lupinus albus
Lj4g0007308 Lotus japonicus
Lsat_1_v5_gn_5_89380 Lactuca sativa
Lsat_1_v5_gn_8_63881 Lactuca sativa
Manes.06G030800 Manihot esculenta
Manes.14G143400 Manihot esculenta
Mapoly0090s0068 Marchantia polymorpha
MBI15_g27186_MAGBIO Magnolia biondii
MCO15G501 Micromonas commoda
MD02G1005700 Malus domestica
MD15G1150400 Malus domestica
Medtr4g130530 Medicago truncatula
Medtr7g017820 Medicago truncatula
MELO3C004125.2 Cucumis melo
Migut.K00308 Erythranthe guttata
MSTRG.10705 Avicennia marina
Nitab4.5_0002611g0030 Nicotiana tabacum
Nn2g12436 Nelumbo nucifera
Nn8g39976 Nelumbo nucifera
Nn8g39977 Nelumbo nucifera
Oeu054265.1 Olea europaea
Oeu054266.1 Olea europaea
Os02g0794400 Oryza sativa ssp. japonica
Peaxi162Scf00401g00330 Petunia axillaris
PGR102G1430 Punica granatum
PGSC0003DMG400011147 Solanum tuberosum
PGSC0003DMG400017027 Solanum tuberosum
Phvul.003G154700 Phaseolus vulgaris
Potri.006G182000 Populus trichocarpa
Potri.018G104000 Populus trichocarpa
Pp3c14_5800 Physcomitrium patens
Pp3c2_19940 Physcomitrium patens
PRCOL_00002519 Prasinoderma coloniale
Prupe.7G265300 Prunus persica
Psat7g006440 Pisum sativum
PSO111G0014 Papaver somniferum
PSO782G2525 Papaver somniferum
QL02p093831 Quercus lobata
RcHm_v2.0_Chr2g0085411 Rosa chinensis
Rhsim01G0027300 Rhododendron simsii
Sabra18G0089400 Salix brachista
SalBow1G0331 Salvia bowleyana
Sc18g0003050 Simmondsia chinensis
Sed0014938 Sechium edule
Sed0017216 Sechium edule
SEGI_13735 Sequoiadendron giganteum
SEGI_33455 Sequoiadendron giganteum
SGA_v2.0_scaffold63G21785 Striga asiatica
SMO353G0310 Selaginella moellendorffii
Solyc07g005830.3 Solanum lycopersicum
Sopen07g001930 Solanum pennellii
Sp4g02970 Schrenkiella parvula
Sp7g28600 Schrenkiella parvula
TAR383G0346 Trochodendron aralioides
THA.LOC104803547 Tarenaya hassleriana
Thecc.09G151500 Theobroma cacao
Thhalv10000269m.g Eutrema salsugineum
Thhalv10025935m.g Eutrema salsugineum
TWI63G1092 Tripterygium wilfordii
unitig_899.g15465 Utricularia gibba
vmacro16787 Vaccinium macrocarpon
VMungo1215G2193 Vigna mungo
Zm00001eb257720 Zea mays

User provided reference genes

Program Settings