Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18850 Brassica napus
A01p18910 Brassica napus
A03p57380 Brassica napus
Aa31LG5G12060 Aethionema arabicum
Actinidia06638 Actinidia chinensis
Actinidia20087 Actinidia chinensis
Ah.02g127670 Amaranthus hybridus
Ah.03g138260 Amaranthus hybridus
AL7G25100 Arabidopsis lyrata
AL7G25110 Arabidopsis lyrata
Aqoxy1G03166 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8TRX11 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6YK28 Arachis hypogaea
AT4G27610 Arabidopsis thaliana
AT4G27620 Arabidopsis thaliana
ATR0829G074 Amborella trichopoda
Atru.chr12.1856 Acer truncatum
AUR62002842 Chenopodium quinoa
AUR62037307 Chenopodium quinoa
BcaC06g32678 Brassica carinata
BcaC09g50567 Brassica carinata
BcaC09g50575 Brassica carinata
BcaNung01652 Brassica carinata
BcaNung01654 Brassica carinata
BolC1t02329H Brassica oleracea
BolC1t02331H Brassica oleracea
BolC7t46040H Brassica oleracea
BraA01t01828Z Brassica rapa
BraA01t01832Z Brassica rapa
BraA03t14804Z Brassica rapa
C01p23780 Brassica napus
C01p23860 Brassica napus
C07p55600 Brassica napus
CANSAT21G2449 Cannabis sativa
CARHR235310 Cardamine hirsuta
CARHR235320 Cardamine hirsuta
Carub.0007s1323 Capsella rubella
Carub.0007s1324 Capsella rubella
Ca_19600_v3 Cicer arietinum L.
Cc04_g10300 Coffea canephora
CDE02G1754 Ceratophyllum demersum
CDE11G1120 Ceratophyllum demersum
Cfa016079 Carpinus fangiana
Ciclev10032005m.g Citrus clementina
CiPaw.05G212300 Carya illinoinensis
CiPaw.06G036300 Carya illinoinensis
ClCG09G013160 Citrullus lanatus
COL.COLO4_15125 Corchorus olitorius
CsaV3_6G036850 Cucumis sativus L.
CSS0020442 Camellia sinensis var. sinensis
CSS0035319 Camellia sinensis var. sinensis
DCAR_030965 Daucus carota
Dinv03730 Davidia involucrata
Dinv24334 Davidia involucrata
Duzib106G1350 Durio zibethinus
Duzib128G0049 Durio zibethinus
Duzib177G0832 Durio zibethinus
ECA236G0885 Erigeron canadensis
EL10Ac6g14347 Beta vulgaris
Eucgr.E02431 Eucalyptus grandis
FAN01G2619 Fragaria x ananassa
FAN03G0573 Fragaria x ananassa
FAN10G2489 Fragaria x ananassa
FvH4_7g34310 Fragaria vesca
Glyma.09G222900 Glycine max
Glyma.12G014100 Glycine max
Gohir.A02G114600 Gossypium hirsutum
Gohir.A08G221644 Gossypium hirsutum
Gohir.A13G158100 Gossypium hirsutum
Gohir.D03G055600 Gossypium hirsutum
Gohir.D08G240400 Gossypium hirsutum
Gohir.D13G162400 Gossypium hirsutum
Gorai.003G058400 Gossypium raimondii
Gorai.004G255700 Gossypium raimondii
Gorai.013G184500 Gossypium raimondii
GSVIVG01024321001 Vitis vinifera
HanXRQChr04g0116531 Helianthus annuus
HanXRQChr15g0482031 Helianthus annuus
Haze_00366 Corylus avellana
Hma1.2p1_0528F.1_g173050 Hydrangea macrophylla
HPP92_004939 Vanilla planifolia
HPP92_004940 Vanilla planifolia
HPP92_022761 Vanilla planifolia
Lalb_Chr01g0000741 Lupinus albus
Lalb_Chr03g0024311 Lupinus albus
Lalb_Chr19g0140091 Lupinus albus
Lj2A605T63 Lonicera japonica
Lj3g0005411 Lotus japonicus
Manes.08G160300 Manihot esculenta
Manes.09G130000 Manihot esculenta
MBI04_g30768_MAGBIO Magnolia biondii
MD01G1239500 Malus domestica
MD07G1032800 Malus domestica
Medtr0004s0230 Medicago truncatula
MELO3C014341.2 Cucumis melo
Migut.A00176 Erythranthe guttata
Migut.E01543 Erythranthe guttata
MSTRG.14034 Avicennia marina
MSTRG.1666 Avicennia marina
Nitab4.5_0000805g0040 Nicotiana tabacum
Nitab4.5_0000877g0060 Nicotiana tabacum
Nn1g09153 Nelumbo nucifera
Nn3g21937 Nelumbo nucifera
Nn4g25357 Nelumbo nucifera
Oeu004249.1 Olea europaea
Oeu037809.1 Olea europaea
Oeu044132.1 Olea europaea
Oeu047689.1 Olea europaea
Os02g0582200 Oryza sativa ssp. japonica
Peaxi162Scf00012g01425 Petunia axillaris
PGR142G2085 Punica granatum
PGSC0003DMG400028677 Solanum tuberosum
Phvul.011G017000 Phaseolus vulgaris
Potri.013G076900 Populus trichocarpa
Potri.019G042700 Populus trichocarpa
Prupe.2G329400 Prunus persica
Psat0s643g0040 Pisum sativum
PSO063G1904 Papaver somniferum
PSO782G0681 Papaver somniferum
QL09p020531 Quercus lobata
RcHm_v2.0_Chr1g0384701 Rosa chinensis
RhsimUnG0132900 Rhododendron simsii
Sabra13G0065900 Salix brachista
Sabra19G0053300 Salix brachista
SalBow1G7515 Salvia bowleyana
Sc07g0001340 Simmondsia chinensis
Sed0002645 Sechium edule
Sed0013330 Sechium edule
SEGI_28064 Sequoiadendron giganteum
SEGI_37617 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38052 Striga asiatica
SGA_v2.0_scaffold249G44960 Striga asiatica
SGA_v2.0_scaffold249G44962 Striga asiatica
SMO367G0918 Selaginella moellendorffii
Solyc11g005810.2 Solanum lycopersicum
Sopen11g001770 Solanum pennellii
Sp7g25560 Schrenkiella parvula
Sp7g25570 Schrenkiella parvula
TAR629G2324 Trochodendron aralioides
TAR636G2823 Trochodendron aralioides
THA.LOC104805719 Tarenaya hassleriana
THA.LOC104821693 Tarenaya hassleriana
THA.LOC104823796 Tarenaya hassleriana
Thecc.05G223200 Theobroma cacao
Thhalv10025651m.g Eutrema salsugineum
Thhalv10025690m.g Eutrema salsugineum
TPR.G9830 Trifolium pratense
TWI12G0369 Tripterygium wilfordii
TWI18G0476 Tripterygium wilfordii
unitig_578.g16583 Utricularia gibba
unitig_8.g5063 Utricularia gibba
unitig_8.g5064 Utricularia gibba
vmacro12865 Vaccinium macrocarpon
VMungo1127G1418 Vigna mungo
Zm00001eb183340 Zea mays
Zm00001eb245400 Zea mays

User provided reference genes

Program Settings