Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27770 Brassica napus
A06p02520 Brassica napus
Aa31LG10G3560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1090 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3971 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3974 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2258 Anthoceros agrestis
Actinidia31100 Actinidia chinensis
Actinidia34718 Actinidia chinensis
Ah.12g062170 Amaranthus hybridus
AL1G59240 Arabidopsis lyrata
AL3G34930 Arabidopsis lyrata
Aqoxy2G01234 Aquilegia oxysepala
Aqoxy3G00701 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GZ7TSK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4KLNP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2EQ4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XFSN2Q Arachis hypogaea
AT1G51390 Arabidopsis thaliana
AT3G20970 Arabidopsis thaliana
ATR0820G097 Amborella trichopoda
Atru.chr12.1003 Acer truncatum
Atru.chr4.937 Acer truncatum
AUR62037089 Chenopodium quinoa
AUR62038365 Chenopodium quinoa
BcaB02g10852 Brassica carinata
BcaB06g26171 Brassica carinata
BcaB07g33585 Brassica carinata
BcaC05g26273 Brassica carinata
BcaC05g28207 Brassica carinata
BcaC06g36644 Brassica carinata
BcaC08g43308 Brassica carinata
BolC5t32300H Brassica oleracea
BolC5t33041H Brassica oleracea
BolC6t35767H Brassica oleracea
BolC7t40596H Brassica oleracea
BolC9t55963H Brassica oleracea
BraA05t21664Z Brassica rapa
BraA06t23459Z Brassica rapa
C05p22850 Brassica napus
C05p35820 Brassica napus
C05p43110 Brassica napus
C06p06550 Brassica napus
C07p01900 Brassica napus
C09p31040 Brassica napus
CAN.G730.34 Capsicum annuum
CANSAT56G3264 Cannabis sativa
CARHR041540 Cardamine hirsuta
CARHR096860 Cardamine hirsuta
Carub.0001s4026 Capsella rubella
Carub.0003s2093 Capsella rubella
Carub.0162s0001 Capsella rubella
Ca_29319_v3 Cicer arietinum L.
CBR_g48305 Chara braunii
Cc02_g09830 Coffea canephora
CDE06G1789 Ceratophyllum demersum
CDE08G1288 Ceratophyllum demersum
Cfa007809 Carpinus fangiana
Cfa026205 Carpinus fangiana
Ciclev10032367m.g Citrus clementina
CiPaw.13G038400 Carya illinoinensis
ClCG08G008200 Citrullus lanatus
Cpa.g.sc563.1 Carica papaya
Cre12.g504150 Chlamydomonas reinhardtii
CsaV3_6G004170 Cucumis sativus L.
CSS0011091 Camellia sinensis var. sinensis
CSS0027430 Camellia sinensis var. sinensis
CSS0043819 Camellia sinensis var. sinensis
DCAR_019313 Daucus carota
Dinv02032 Davidia involucrata
Dinv09596 Davidia involucrata
Dinv11852 Davidia involucrata
Duzib128G0508 Durio zibethinus
ECA238G0678 Erigeron canadensis
EL10Ac5g11629 Beta vulgaris
Eucgr.G02697 Eucalyptus grandis
FAN19G3154 Fragaria x ananassa
FAN26G2913 Fragaria x ananassa
FAN28G2368 Fragaria x ananassa
FvH4_1g23510 Fragaria vesca
Glyma.19G061400 Glycine max
Glyma.20G242200 Glycine max
Gohir.A05G287600 Gossypium hirsutum
Gohir.D05G288800 Gossypium hirsutum
Gorai.009G303900 Gossypium raimondii
GSVIVG01011272001 Vitis vinifera
HanXRQChr07g0194231 Helianthus annuus
HanXRQChr11g0342241 Helianthus annuus
Haze_14265 Corylus avellana
Haze_26891 Corylus avellana
HPP92_001974 Vanilla planifolia
Lalb_Chr06g0164101 Lupinus albus
Lj2C31G19 Lonicera japonica
Lj5g0008296 Lotus japonicus
Lsat_1_v5_gn_2_104981 Lactuca sativa
Manes.10G058150 Manihot esculenta
Mapoly0010s0052 Marchantia polymorpha
MCO10G342 Micromonas commoda
MD04G1028700 Malus domestica
Medtr1g069215 Medicago truncatula
Medtr3g073070 Medicago truncatula
MELO3C019892.2 Cucumis melo
Migut.F00905 Erythranthe guttata
Migut.F01616 Erythranthe guttata
MSTRG.9090 Avicennia marina
Nitab4.5_0001437g0120 Nicotiana tabacum
Nitab4.5_0001437g0190 Nicotiana tabacum
Nitab4.5_0003774g0030 Nicotiana tabacum
Nn5g28600 Nelumbo nucifera
Oeu030507.2 Olea europaea
Oeu030509.1 Olea europaea
Os05g0155300 Oryza sativa ssp. japonica
Peaxi162Scf00173g00068 Petunia axillaris
PGR142G2157 Punica granatum
PGSC0003DMG400019464 Solanum tuberosum
Phvul.007G008000 Phaseolus vulgaris
Potri.008G022000 Populus trichocarpa
Potri.010G237400 Populus trichocarpa
Pp3c10_14710 Physcomitrium patens
Pp3c3_25460 Physcomitrium patens
PRCOL_00006553 Prasinoderma coloniale
Prupe.2G079800 Prunus persica
Psat3g105760 Pisum sativum
Psat6g239000 Pisum sativum
Psat7g160920 Pisum sativum
PSO339G5017 Papaver somniferum
PSO384G4844 Papaver somniferum
QL04p044815 Quercus lobata
RcHm_v2.0_Chr2g0118911 Rosa chinensis
Rhsim03G0100800 Rhododendron simsii
Rhsim03G0100900 Rhododendron simsii
Rhsim09G0142900 Rhododendron simsii
Sabra08G0014900 Salix brachista
SalBow6G2690 Salvia bowleyana
Sc20g0001200 Simmondsia chinensis
Sed0018572 Sechium edule
SEGI_01464 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21346 Striga asiatica
SHI21636 Sapria himalayana
SMO119G0422 Selaginella moellendorffii
Solyc11g007120.2 Solanum lycopersicum
Sopen11g003040 Solanum pennellii
Sp1g38060 Schrenkiella parvula
Sp3g18970 Schrenkiella parvula
TAR633G2407 Trochodendron aralioides
TAR636G3245 Trochodendron aralioides
THA.LOC104816877 Tarenaya hassleriana
THA.LOC104817910 Tarenaya hassleriana
Thecc.10G107700 Theobroma cacao
Thhalv10011711m.g Eutrema salsugineum
Thhalv10021272m.g Eutrema salsugineum
TPR.G10412 Trifolium pratense
TWI63G0038 Tripterygium wilfordii
unitig_0.g763 Utricularia gibba
VMungo0720G1764 Vigna mungo
Zm00001eb346110 Zea mays

User provided reference genes

Program Settings