Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17170 Brassica napus
A04p23420 Brassica napus
Aa31LG10G9620 Aethionema arabicum
Aa31LG5G6120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1685 Anthoceros agrestis
Actinidia28578 Actinidia chinensis
Actinidia28579 Actinidia chinensis
Actinidia34572 Actinidia chinensis
Ah.13g073660 Amaranthus hybridus
AL4G25610 Arabidopsis lyrata
Aqoxy2G04150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IGH5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D04CBC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H82CQV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YPS1PN Arachis hypogaea
AT2G30710 Arabidopsis thaliana
ATR0743G201 Amborella trichopoda
Atru.chr4.1348 Acer truncatum
AUR62002365 Chenopodium quinoa
AUR62023820 Chenopodium quinoa
BcaB01g04083 Brassica carinata
BcaC01g06012 Brassica carinata
BcaC07g38816 Brassica carinata
BolC3t14402H Brassica oleracea
BraA04t17869Z Brassica rapa
C03p20270 Brassica napus
C04p59720 Brassica napus
CAN.G31.7 Capsicum annuum
CANSAT54G0526 Cannabis sativa
CARHR124210 Cardamine hirsuta
Carub.0004s1189 Capsella rubella
Ca_01238_v3 Cicer arietinum L.
Ca_20808_v3 Cicer arietinum L.
CBR_g39554 Chara braunii
CBR_g4869 Chara braunii
Cc03_g11850 Coffea canephora
CDE04G1604 Ceratophyllum demersum
CDE07G1691 Ceratophyllum demersum
Cfa015223 Carpinus fangiana
Cfa025053 Carpinus fangiana
Ciclev10020095m.g Citrus clementina
Ciclev10024547m.g Citrus clementina
CiPaw.01G173200 Carya illinoinensis
CiPaw.02G103100 Carya illinoinensis
ClCG07G015070 Citrullus lanatus
COL.COLO4_28386 Corchorus olitorius
Cpa.g.sc9.333 Carica papaya
Cre12.g486400 Chlamydomonas reinhardtii
CsaV3_4G002620 Cucumis sativus L.
CSS0040744 Camellia sinensis var. sinensis
DCAR_005442 Daucus carota
Dinv05093 Davidia involucrata
Dinv44167 Davidia involucrata
Duzib151G0372 Durio zibethinus
Duzib212G0895 Durio zibethinus
Duzib268G0117 Durio zibethinus
ECA240G0670 Erigeron canadensis
EL10Ac3g06030 Beta vulgaris
Eucgr.A00035 Eucalyptus grandis
FAN11G3422 Fragaria x ananassa
FAN16G2549 Fragaria x ananassa
FAN21G0673 Fragaria x ananassa
FAN25G3192 Fragaria x ananassa
FvH4_3g19760 Fragaria vesca
Glyma.11G125000 Glycine max
Glyma.12G049550 Glycine max
Glyma.12G049600 Glycine max
Glyma.13G346500 Glycine max
Glyma.15G027700 Glycine max
Gohir.A02G092700 Gossypium hirsutum
Gohir.A10G141300 Gossypium hirsutum
Gohir.D02G110800 Gossypium hirsutum
Gohir.D03G089250 Gossypium hirsutum
Gohir.D10G125600 Gossypium hirsutum
Gorai.003G072200 Gossypium raimondii
Gorai.005G125700 Gossypium raimondii
Gorai.011G138600 Gossypium raimondii
GSVIVG01038095001 Vitis vinifera
HanXRQChr14g0433711 Helianthus annuus
Haze_01415 Corylus avellana
HPP92_012714 Vanilla planifolia
HPP92_012799 Vanilla planifolia
Hund03187 Selenicereus undatus
Hund12396 Selenicereus undatus
Lalb_Chr14g0372611 Lupinus albus
Lalb_Chr22g0352021 Lupinus albus
Lalb_Chr24g0396631 Lupinus albus
Lj3A151G15 Lonicera japonica
Lj3g0020450 Lotus japonicus
Lsat_1_v5_gn_3_104860 Lactuca sativa
Lsat_1_v5_gn_3_111900 Lactuca sativa
Manes.04G048500 Manihot esculenta
Manes.11G127300 Manihot esculenta
Mapoly0111s0053 Marchantia polymorpha
MBI07_g02901_MAGBIO Magnolia biondii
MBI11_g23943_MAGBIO Magnolia biondii
MCO01G708 Micromonas commoda
MD03G1229700 Malus domestica
MD04G1046900 Malus domestica
MD11G1250200 Malus domestica
Medtr2g099380 Medicago truncatula
Medtr4g068180 Medicago truncatula
MELO3C017779.2 Cucumis melo
Migut.G01286 Erythranthe guttata
Migut.N03084 Erythranthe guttata
MSTRG.24569 Avicennia marina
Nitab4.5_0004047g0070 Nicotiana tabacum
Nn1g09723 Nelumbo nucifera
Nn7g37611 Nelumbo nucifera
Oeu015936.3 Olea europaea
Os09g0515800 Oryza sativa ssp. japonica
Peaxi162Scf00126g00812 Petunia axillaris
PGR014G0004 Punica granatum
PGR083G2412 Punica granatum
PGSC0003DMG400022865 Solanum tuberosum
Phvul.005G155500 Phaseolus vulgaris
Phvul.011G051800 Phaseolus vulgaris
Potri.007G134200 Populus trichocarpa
Pp3c9_25750 Physcomitrium patens
Prupe.1G201500 Prunus persica
Prupe.4G179600 Prunus persica
Psat5g291640 Pisum sativum
Psat7g208360 Pisum sativum
PSO017G4600 Papaver somniferum
PSO675G3484 Papaver somniferum
QL10p052572 Quercus lobata
RcHm_v2.0_Chr5g0033161 Rosa chinensis
Rhsim09G0013500 Rhododendron simsii
Sabra07G0108900 Salix brachista
Sabra11G0076000 Salix brachista
Sabra12G0034200 Salix brachista
SalBow2G2136 Salvia bowleyana
SalBow6G3785 Salvia bowleyana
Sc13g0007990 Simmondsia chinensis
Sed0003070 Sechium edule
Sed0022333 Sechium edule
SEGI_32564 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10992 Striga asiatica
SMO146G0212 Selaginella moellendorffii
Solyc11g005010.3 Solanum lycopersicum
Sopen11g001030 Solanum pennellii
Sp4g13230 Schrenkiella parvula
TAR362G0066 Trochodendron aralioides
THA.LOC104815520 Tarenaya hassleriana
Thecc.04G171300 Theobroma cacao
Thhalv10016666m.g Eutrema salsugineum
TPR.G34220 Trifolium pratense
TPR.G6599 Trifolium pratense
TWI38G2236 Tripterygium wilfordii
TWI63G0381 Tripterygium wilfordii
unitig_578.g16717 Utricularia gibba
vmacro00654 Vaccinium macrocarpon
vmacro21333 Vaccinium macrocarpon
VMungo1080G1803 Vigna mungo
VMungo1127G1426 Vigna mungo
Zm00001eb191360 Zea mays

User provided reference genes

Program Settings