Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p43590 Brassica napus
A07p08010 Brassica napus
Aa31LG8G11000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.913 Anthoceros agrestis
Actinidia20844 Actinidia chinensis
Ah.04g153790 Amaranthus hybridus
AL3G43250 Arabidopsis lyrata
Aqoxy5G00132 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14QJGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1TG9FP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7A5RV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PGR81E Arachis hypogaea
AT1G48520 Arabidopsis thaliana
ATR0787G095 Amborella trichopoda
AUR62015690 Chenopodium quinoa
AUR62031623 Chenopodium quinoa
BcaB03g14590 Brassica carinata
BcaB06g26612 Brassica carinata
BcaB06g27371 Brassica carinata
BcaB06g27551 Brassica carinata
BcaC01g03327 Brassica carinata
BcaC01g03330 Brassica carinata
BcaC06g35681 Brassica carinata
BolC3t17622H Brassica oleracea
BolC7t41675H Brassica oleracea
BraA03t13496Z Brassica rapa
BraA07t28588Z Brassica rapa
C03p53620 Brassica napus
C07p12070 Brassica napus
CAN.G1407.1 Capsicum annuum
CAN.G154.7 Capsicum annuum
CAN.G58.44 Capsicum annuum
CAN.G812.19 Capsicum annuum
CANSAT78G0903 Cannabis sativa
CARHR100400 Cardamine hirsuta
Carub.0003s2695 Capsella rubella
Ca_04899_v3 Cicer arietinum L.
CBR_g20386 Chara braunii
Cc01_g12830 Coffea canephora
Cc03_g06430 Coffea canephora
Cc03_g06440 Coffea canephora
Cc03_g06450 Coffea canephora
CDE02G2675 Ceratophyllum demersum
Cfa014797 Carpinus fangiana
Cfa025385 Carpinus fangiana
Ciclev10004652m.g Citrus clementina
CiPaw.01G176700 Carya illinoinensis
ClCG06G007290 Citrullus lanatus
COL.COLO4_15980 Corchorus olitorius
Cpa.g.sc59.16 Carica papaya
Cre14.g627488 Chlamydomonas reinhardtii
CsaV3_2G012380 Cucumis sativus L.
CsaV3_2G012390 Cucumis sativus L.
CSS0041578 Camellia sinensis var. sinensis
CSS0049189 Camellia sinensis var. sinensis
DCAR_002298 Daucus carota
DCAR_018323 Daucus carota
Dinv29794 Davidia involucrata
Duzib151G0232 Durio zibethinus
Duzib212G0777 Durio zibethinus
ECA248G0897 Erigeron canadensis
EL10Ac3g06680 Beta vulgaris
Eucgr.G01176 Eucalyptus grandis
Eucgr.H02859 Eucalyptus grandis
FAN12G0780 Fragaria x ananassa
FAN12G2037 Fragaria x ananassa
FAN22G2229 Fragaria x ananassa
FvH4_4g04730 Fragaria vesca
FvH4_4g05030 Fragaria vesca
Glyma.05G240000 Glycine max
Glyma.08G047100 Glycine max
Gohir.A09G231100 Gossypium hirsutum
Gohir.D09G232200 Gossypium hirsutum
Gorai.006G255000 Gossypium raimondii
GSVIVG01027937001 Vitis vinifera
GSVIVG01027938001 Vitis vinifera
HanXRQChr01g0023061 Helianthus annuus
Haze_11481 Corylus avellana
HPP92_005111 Vanilla planifolia
Hund24872 Selenicereus undatus
Lalb_Chr05g0222141 Lupinus albus
Lalb_Chr09g0330801 Lupinus albus
Lj3A639G13 Lonicera japonica
Lj3C639G0 Lonicera japonica
Lj4g0011200 Lotus japonicus
Lj4g0013294 Lotus japonicus
Lsat_1_v5_gn_1_75460 Lactuca sativa
Manes.03G157750 Manihot esculenta
Mapoly0107s0036 Marchantia polymorpha
MBI07_g08913_MAGBIO Magnolia biondii
MCO02G423 Micromonas commoda
MCO15G005 Micromonas commoda
MD13G1223600 Malus domestica
MD13G1223700 Malus domestica
MD16G1228500 Malus domestica
Medtr5g055940 Medicago truncatula
MELO3C023021.2 Cucumis melo
MELO3C023047.2 Cucumis melo
Migut.G00560 Erythranthe guttata
Nitab4.5_0001041g0120 Nicotiana tabacum
Nitab4.5_0005154g0090 Nicotiana tabacum
Nitab4.5_0022682g0010 Nicotiana tabacum
Nn1g02992 Nelumbo nucifera
Oeu059392.1 Olea europaea
Oeu059393.1 Olea europaea
Os11g0544800 Oryza sativa ssp. japonica
Peaxi162Scf00531g00034 Petunia axillaris
PGR031G2768 Punica granatum
PGSC0003DMG400001555 Solanum tuberosum
Phvul.002G091800 Phaseolus vulgaris
Phvul.002G322100 Phaseolus vulgaris
Phvul.009G129001 Phaseolus vulgaris
Potri.008G172700 Populus trichocarpa
Potri.010G064700 Populus trichocarpa
Pp3c18_10660 Physcomitrium patens
Pp3c21_8670 Physcomitrium patens
Pp3c22_13460 Physcomitrium patens
Pp3s32_289 Physcomitrium patens
PRCOL_00005018 Prasinoderma coloniale
Prupe.1G050600 Prunus persica
Psat0s5182g0040 Pisum sativum
Psat2g046760 Pisum sativum
Psat2g046800 Pisum sativum
Psat2g106400 Pisum sativum
Psat3g087000 Pisum sativum
PSO384G0234 Papaver somniferum
PSO832G1147 Papaver somniferum
QL02p071976 Quercus lobata
QL06p021563 Quercus lobata
RcHm_v2.0_Chr4g0395911 Rosa chinensis
RcHm_v2.0_Chr4g0395921 Rosa chinensis
RcHm_v2.0_Chr7g0203561 Rosa chinensis
Rhsim02G0163300 Rhododendron simsii
Rhsim04G0170900 Rhododendron simsii
Sabra10G0042300 Salix brachista
SalBow2G2567 Salvia bowleyana
Sc19g0005610 Simmondsia chinensis
Sed0004125 Sechium edule
SEGI_09601 Sequoiadendron giganteum
SEGI_18338 Sequoiadendron giganteum
SEGI_18835 Sequoiadendron giganteum
SMO147G0416 Selaginella moellendorffii
SMO273G0058 Selaginella moellendorffii
Solyc09g090840.3 Solanum lycopersicum
Sopen09g033800 Solanum pennellii
Sp3g22110 Schrenkiella parvula
THA.LOC104804573 Tarenaya hassleriana
THA.LOC104808741 Tarenaya hassleriana
Thecc.04G266300 Theobroma cacao
Thhalv10002467m.g Eutrema salsugineum
TPR.G38256 Trifolium pratense
TWI09G1097 Tripterygium wilfordii
unitig_748.g8291 Utricularia gibba
vmacro08564 Vaccinium macrocarpon
VMungo0251G0467 Vigna mungo
Zm00001eb197630 Zea mays

User provided reference genes

Program Settings