Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00090 Brassica napus
Aa31LG1G29400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.560 Anthoceros agrestis
Actinidia00705 Actinidia chinensis
Actinidia24288 Actinidia chinensis
Ah.05g167980 Amaranthus hybridus
AL4G47570 Arabidopsis lyrata
AL7G17990 Arabidopsis lyrata
Aqoxy2G03153 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BJ6WT1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJK0SQ Arachis hypogaea
AT2G47980 Arabidopsis thaliana
ATR0706G112 Amborella trichopoda
Atru.chr5.1294 Acer truncatum
AUR62013599 Chenopodium quinoa
AUR62026692 Chenopodium quinoa
BcaB02g08728 Brassica carinata
BcaC02g12533 Brassica carinata
BolC4t21648H Brassica oleracea
BraA05t19005Z Brassica rapa
C04p00010 Brassica napus
CAN.G13.21 Capsicum annuum
CANSAT25G1381 Cannabis sativa
CARHR143360 Cardamine hirsuta
Carub.0004s3070 Capsella rubella
Ca_09103_v3 Cicer arietinum L.
CBR_g31051 Chara braunii
Cc01_g20100 Coffea canephora
CDE05G1251 Ceratophyllum demersum
Cfa025969 Carpinus fangiana
Ciclev10018593m.g Citrus clementina
CiPaw.07G098500 Carya illinoinensis
ClCG03G018060 Citrullus lanatus
ClCG03G018080 Citrullus lanatus
COL.COLO4_03377 Corchorus olitorius
COL.COLO4_08044 Corchorus olitorius
COL.COLO4_15782 Corchorus olitorius
COL.COLO4_31667 Corchorus olitorius
Cpa.g.sc9.149 Carica papaya
Cre17.g736400 Chlamydomonas reinhardtii
CsaV3_1G038120 Cucumis sativus L.
CSS0044691 Camellia sinensis var. sinensis
DCAR_018370 Daucus carota
DCAR_030309 Daucus carota
Dinv32984 Davidia involucrata
Duzib138G0788 Durio zibethinus
Duzib147G0309 Durio zibethinus
ECA247G2915 Erigeron canadensis
EL10Ac1g01562 Beta vulgaris
Eucgr.K03425 Eucalyptus grandis
FAN15G3206 Fragaria x ananassa
FAN20G1430 Fragaria x ananassa
FAN24G1905 Fragaria x ananassa
FAN27G0404 Fragaria x ananassa
FvH4_2g24570 Fragaria vesca
Glyma.03G207600 Glycine max
Gohir.A11G118700 Gossypium hirsutum
Gohir.D11G123600 Gossypium hirsutum
Gorai.007G132500 Gossypium raimondii
GSVIVG01011020001 Vitis vinifera
HanXRQChr08g0228671 Helianthus annuus
HanXRQChr08g0228681 Helianthus annuus
HanXRQChr10g0283031 Helianthus annuus
Haze_04797 Corylus avellana
Hma1.2p1_0399F.1_g144310 Hydrangea macrophylla
Hma1.2p1_0399F.1_g144320 Hydrangea macrophylla
Hma1.2p1_0399F.1_g144330 Hydrangea macrophylla
Hma1.2p1_1049F.1_g251875 Hydrangea macrophylla
Hma1.2p1_1049F.1_g251880 Hydrangea macrophylla
Hma1.2p1_1049F.1_g251890 Hydrangea macrophylla
HPP92_017192 Vanilla planifolia
HPP92_027340 Vanilla planifolia
Hund18022 Selenicereus undatus
Lalb_Chr20g0111011 Lupinus albus
Lalb_Chr25g0287581 Lupinus albus
Lj1g0026346 Lotus japonicus
Lj2A1184G69 Lonicera japonica
Lsat_1_v5_gn_9_5121 Lactuca sativa
Manes.01G212500 Manihot esculenta
Mapoly0007s0132 Marchantia polymorpha
MBI19_g27957_MAGBIO Magnolia biondii
MCO01G509 Micromonas commoda
MD11G1296700 Malus domestica
Medtr1g047970 Medicago truncatula
Medtr1g048130 Medicago truncatula
Medtr3g050420 Medicago truncatula
Medtr5g092930 Medicago truncatula
Medtr7g089690 Medicago truncatula
Medtr7g089710 Medicago truncatula
Medtr7g107440 Medicago truncatula
MELO3C015235.2 Cucumis melo
MELO3C033873.2 Cucumis melo
Migut.D00237 Erythranthe guttata
MSTRG.18200 Avicennia marina
Nitab4.5_0000135g0040 Nicotiana tabacum
Nitab4.5_0000282g0030 Nicotiana tabacum
Nitab4.5_0000282g0040 Nicotiana tabacum
Nn3g21239 Nelumbo nucifera
Oeu002696.1 Olea europaea
Os05g0188500 Oryza sativa ssp. japonica
Peaxi162Scf00159g01650 Petunia axillaris
PGR044G1334 Punica granatum
PGSC0003DMG400005432 Solanum tuberosum
PGSC0003DMG400006683 Solanum tuberosum
PGSC0003DMG400017057 Solanum tuberosum
PGSC0003DMG400017058 Solanum tuberosum
PGSC0003DMG400019558 Solanum tuberosum
PGSC0003DMG400019559 Solanum tuberosum
PGSC0003DMG401015901 Solanum tuberosum
PGSC0003DMG402015901 Solanum tuberosum
Phvul.001G201200 Phaseolus vulgaris
Potri.002G230800 Populus trichocarpa
Potri.014G151400 Populus trichocarpa
Pp3c9_5570 Physcomitrium patens
Prupe.8G250900 Prunus persica
Psat3g025520 Pisum sativum
PSO017G3399 Papaver somniferum
PSO170G5080 Papaver somniferum
PSO384G2775 Papaver somniferum
PSO407G0071 Papaver somniferum
QL12p023612 Quercus lobata
QL12p023658 Quercus lobata
RcHm_v2.0_Chr5g0002211 Rosa chinensis
RcHm_v2.0_Chr6g0292391 Rosa chinensis
Rhsim13G0018300 Rhododendron simsii
Sabra02G0176000 Salix brachista
SalBow3G2371 Salvia bowleyana
Sc17g0003630 Simmondsia chinensis
Sed0020737 Sechium edule
SEGI_13218 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00427 Striga asiatica
SHI14494 Sapria himalayana
SMO347G0479 Selaginella moellendorffii
Solyc03g051710.1 Solanum lycopersicum
Solyc03g150123.1 Solanum lycopersicum
Solyc05g023600.3 Solanum lycopersicum
Solyc05g026510.4 Solanum lycopersicum
Sopen05g017970 Solanum pennellii
Sopen05g022990 Solanum pennellii
Sopen07g009810 Solanum pennellii
Sp4g29900 Schrenkiella parvula
TAR633G2469 Trochodendron aralioides
TAR633G2734 Trochodendron aralioides
TAR636G0105 Trochodendron aralioides
THA.LOC104817537 Tarenaya hassleriana
Thecc.01G288600 Theobroma cacao
Thecc.06G205800 Theobroma cacao
Thecc.06G205900 Theobroma cacao
Thecc.06G206000 Theobroma cacao
Thhalv10001288m.g Eutrema salsugineum
TPR.G32282 Trifolium pratense
TWI59G0906 Tripterygium wilfordii
unitig_22.g5252 Utricularia gibba
vmacro02515 Vaccinium macrocarpon
VMungo1383G2773 Vigna mungo
Zm00001eb115650 Zea mays

User provided reference genes

Program Settings