Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14990 Brassica napus
A07p12580 Brassica napus
A07p34850 Brassica napus
Aa31LG7G9090 Aethionema arabicum
Actinidia16661 Actinidia chinensis
Ah.02g128020 Amaranthus hybridus
Ah.03g137540 Amaranthus hybridus
AL1G39920 Arabidopsis lyrata
AL2G27300 Arabidopsis lyrata
Aqoxy3G00274 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea
AT1G25400 Arabidopsis thaliana
AT1G68440 Arabidopsis thaliana
ATR1125G023 Amborella trichopoda
Atru.chr11.115 Acer truncatum
AUR62035202 Chenopodium quinoa
BcaB03g14040 Brassica carinata
BcaB03g15806 Brassica carinata
BcaB05g24380 Brassica carinata
BcaC03g14945 Brassica carinata
BcaC06g35214 Brassica carinata
BcaC08g46281 Brassica carinata
BcaC08g46285 Brassica carinata
BolC2t08557H Brassica oleracea
BolC6t39272H Brassica oleracea
BolC7t42370H Brassica oleracea
BraA02t06566Z Brassica rapa
BraA07t29036Z Brassica rapa
C02p24550 Brassica napus
C06p41510 Brassica napus
C07p18590 Brassica napus
CANSAT01G1145 Cannabis sativa
CARHR026080 Cardamine hirsuta
CARHR061220 Cardamine hirsuta
Carub.0001s2510 Capsella rubella
Carub.0002s1495 Capsella rubella
Ca_07534_v3 Cicer arietinum L.
Ca_11162_v3 Cicer arietinum L.
Cc11_g10010 Coffea canephora
CDE06G1731 Ceratophyllum demersum
Cfa018585 Carpinus fangiana
Ciclev10015600m.g Citrus clementina
CiPaw.15G086800 Carya illinoinensis
CiPaw.16G065600 Carya illinoinensis
ClCG05G022630 Citrullus lanatus
ClCG08G005010 Citrullus lanatus
COL.COLO4_05113 Corchorus olitorius
Cpa.g.sc1.28 Carica papaya
CsaV3_5G034410 Cucumis sativus L.
CsaV3_6G003280 Cucumis sativus L.
CSS0006602 Camellia sinensis var. sinensis
CSS0010437 Camellia sinensis var. sinensis
CSS0014673 Camellia sinensis var. sinensis
CSS0017035 Camellia sinensis var. sinensis
DCAR_026738 Daucus carota
DCAR_030166 Daucus carota
Dinv21072 Davidia involucrata
Dinv31629 Davidia involucrata
Duzib248G1266 Durio zibethinus
Duzib251G0437 Durio zibethinus
Duzib268G0767 Durio zibethinus
ECA234G4300 Erigeron canadensis
EL10Ac6g14380 Beta vulgaris
Eucgr.B03012 Eucalyptus grandis
Eucgr.D00333 Eucalyptus grandis
Eucgr.G02311 Eucalyptus grandis
FAN07G0705 Fragaria x ananassa
FAN12G2517 Fragaria x ananassa
FAN12G3270 Fragaria x ananassa
FAN22G1304 Fragaria x ananassa
FvH4_4g27210 Fragaria vesca
Glyma.01G080500 Glycine max
Glyma.08G261000 Glycine max
Glyma.10G273200 Glycine max
Glyma.20G116700 Glycine max
Gohir.A03G147600 Gossypium hirsutum
Gohir.A04G097850 Gossypium hirsutum
Gohir.A05G321608 Gossypium hirsutum
Gohir.D02G170800 Gossypium hirsutum
Gohir.D04G137600 Gossypium hirsutum
Gorai.005G192000 Gossypium raimondii
Gorai.012G122000 Gossypium raimondii
HanXRQChr16g0529431 Helianthus annuus
Haze_17496 Corylus avellana
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla
Lalb_Chr04g0254681 Lupinus albus
Lalb_Chr06g0166021 Lupinus albus
Lalb_Chr10g0100061 Lupinus albus
Lalb_Chr21g0308861 Lupinus albus
Lj2g0027656 Lotus japonicus
Lj5g0021418 Lotus japonicus
Lj6P756T16 Lonicera japonica
Lsat_1_v5_gn_4_15920 Lactuca sativa
Manes.06G066900 Manihot esculenta
Manes.14G103500 Manihot esculenta
MBI09_g16518_MAGBIO Magnolia biondii
MD13G1040500 Malus domestica
MD16G1041500 Malus domestica
Medtr1g110550 Medicago truncatula
Medtr5g056480 Medicago truncatula
MELO3C011535.2 Cucumis melo
MELO3C012256.2 Cucumis melo
Migut.L01056 Erythranthe guttata
MSTRG.7662 Avicennia marina
MSTRG.848 Avicennia marina
Nitab4.5_0000057g0200 Nicotiana tabacum
Nitab4.5_0003715g0040 Nicotiana tabacum
Nitab4.5_0005548g0020 Nicotiana tabacum
Nitab4.5_0005669g0020 Nicotiana tabacum
Nn3g17866 Nelumbo nucifera
Nn4g23867 Nelumbo nucifera
Oeu003185.3 Olea europaea
Oeu034235.1 Olea europaea
Peaxi162Scf00753g00057 Petunia axillaris
PGR102G2503 Punica granatum
PGSC0003DMG400005982 Solanum tuberosum
PGSC0003DMG400014542 Solanum tuberosum
Phvul.003G030600 Phaseolus vulgaris
Phvul.007G028300 Phaseolus vulgaris
Potri.008G121700 Populus trichocarpa
Potri.010G123600 Populus trichocarpa
Prupe.1G312600 Prunus persica
Psat2g095800 Pisum sativum
Psat6g226440 Pisum sativum
PSO017G6556 Papaver somniferum
QL01p041129 Quercus lobata
RcHm_v2.0_Chr4g0435001 Rosa chinensis
Rhsim09G0106900 Rhododendron simsii
Sabra08G0092400 Salix brachista
Sabra10G0093600 Salix brachista
SalBow8G2470 Salvia bowleyana
Sc14g0007400 Simmondsia chinensis
Sed0007978 Sechium edule
Sed0011079 Sechium edule
Sed0013939 Sechium edule
SGA_v2.0_scaffold36G14543 Striga asiatica
SGA_v2.0_scaffold38G14941 Striga asiatica
Solyc04g007250.1 Solanum lycopersicum
Solyc05g009420.1 Solanum lycopersicum
Sopen04g002310 Solanum pennellii
Sopen05g005230 Solanum pennellii
Sp1g22820 Schrenkiella parvula
Sp5g23510 Schrenkiella parvula
TAR371G1108 Trochodendron aralioides
TAR629G3220 Trochodendron aralioides
THA.LOC104821925 Tarenaya hassleriana
Thecc.02G227400 Theobroma cacao
Thhalv10008406m.g Eutrema salsugineum
Thhalv10018918m.g Eutrema salsugineum
TPR.G18826 Trifolium pratense
TPR.G27958 Trifolium pratense
TWI31G1336 Tripterygium wilfordii
TWI79G1695 Tripterygium wilfordii
unitig_26.g10255 Utricularia gibba
VMungo0720G2998 Vigna mungo
VMungo1215G2497 Vigna mungo

User provided reference genes

Program Settings