Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p05090 Brassica napus
A04p21940 Brassica napus
A07p19390 Brassica napus
Aa31LG5G7310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4612 Anthoceros agrestis
Actinidia23938 Actinidia chinensis
Actinidia23939 Actinidia chinensis
Actinidia34405 Actinidia chinensis
Ah.04g160390 Amaranthus hybridus
AL4G23440 Arabidopsis lyrata
Aqoxy7G03598 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ID2MIU Arachis hypogaea
AT2G28910 Arabidopsis thaliana
ATR0693G379 Amborella trichopoda
ATR0733G034 Amborella trichopoda
Atru.chr3.3906 Acer truncatum
AUR62000799 Chenopodium quinoa
AUR62005169 Chenopodium quinoa
BcaB02g10212 Brassica carinata
BcaC02g08125 Brassica carinata
BcaC02g11024 Brassica carinata
BolC4t23730H Brassica oleracea
BolC4t27336H Brassica oleracea
BraA04t17761Z Brassica rapa
BraA07t29644Z Brassica rapa
BraA07t30700Z Brassica rapa
C04p22070 Brassica napus
C04p58100 Brassica napus
CAN.G137.34 Capsicum annuum
CANSAT21G2535 Cannabis sativa
CARHR122080 Cardamine hirsuta
Carub.0004s0990 Capsella rubella
Ca_09918_v3 Cicer arietinum L.
Ca_11220_v3 Cicer arietinum L.
CBR_g53496 Chara braunii
Cc01_g12890 Coffea canephora
CDE04G1893 Ceratophyllum demersum
CDE07G0255 Ceratophyllum demersum
Cfa011505 Carpinus fangiana
Ciclev10028807m.g Citrus clementina
CiPaw.13G094200 Carya illinoinensis
CiPaw.14G068300 Carya illinoinensis
ClCG02G020150 Citrullus lanatus
COL.COLO4_18509 Corchorus olitorius
Cpa.g.sc161.42 Carica papaya
Cpa.g.sc81.149 Carica papaya
Cre09.g389652 Chlamydomonas reinhardtii
CsaV3_6G016860 Cucumis sativus L.
DCAR_024536 Daucus carota
DCAR_025381 Daucus carota
Dinv12426 Davidia involucrata
Duzib168G2248 Durio zibethinus
ECA233G0017 Erigeron canadensis
ECA233G0785 Erigeron canadensis
ECA233G2734 Erigeron canadensis
ECA233G4946 Erigeron canadensis
ECA233G5350 Erigeron canadensis
ECA247G4102 Erigeron canadensis
ECA248G3797 Erigeron canadensis
EL10Ac4g09397 Beta vulgaris
Eucgr.E01882 Eucalyptus grandis
Eucgr.E01961 Eucalyptus grandis
Eucgr.E01963 Eucalyptus grandis
Eucgr.J02052 Eucalyptus grandis
FAN11G0391 Fragaria x ananassa
FAN16G2805 Fragaria x ananassa
FAN21G2159 Fragaria x ananassa
FAN25G1996 Fragaria x ananassa
FvH4_3g36111 Fragaria vesca
Glyma.10G284600 Glycine max
Glyma.20G104700 Glycine max
Gohir.A07G098600 Gossypium hirsutum
Gohir.D07G102900 Gossypium hirsutum
Gorai.001G110800 Gossypium raimondii
HanXRQChr01g0009481 Helianthus annuus
Haze_12047 Corylus avellana
Haze_24097 Corylus avellana
Hma1.2p1_0418F.1_g149200 Hydrangea macrophylla
HPP92_003385 Vanilla planifolia
HPP92_003389 Vanilla planifolia
Hund18907 Selenicereus undatus
Lalb_Chr02g0143571 Lupinus albus
Lalb_Chr06g0163861 Lupinus albus
Lj1P153T22 Lonicera japonica
Lj5g0019317 Lotus japonicus
Lsat_1_v5_gn_5_170600 Lactuca sativa
Manes.01G173800 Manihot esculenta
Manes.02G133000 Manihot esculenta
Mapoly0006s0051 Marchantia polymorpha
MBI14_g16284_MAGBIO Magnolia biondii
MCO13G163 Micromonas commoda
MD03G1093300 Malus domestica
MD11G1107700 Malus domestica
MD11G1108100 Malus domestica
MELO3C025917.2 Cucumis melo
Migut.D02100 Erythranthe guttata
Migut.L00671 Erythranthe guttata
Migut.L00698 Erythranthe guttata
Nitab4.5_0001424g0070 Nicotiana tabacum
Nitab4.5_0003154g0010 Nicotiana tabacum
Nitab4.5_0005880g0060 Nicotiana tabacum
Nn1g00565 Nelumbo nucifera
Oeu019194.1 Olea europaea
Oeu051436.2 Olea europaea
Os05g0297400 Oryza sativa ssp. japonica
Os09g0103700 Oryza sativa ssp. japonica
Peaxi162Scf00045g00052 Petunia axillaris
PGR119G2251 Punica granatum
PGSC0003DMG400018489 Solanum tuberosum
Phvul.007G016200 Phaseolus vulgaris
Potri.001G148000 Populus trichocarpa
Pp3c8_12040 Physcomitrium patens
Prupe.6G077300 Prunus persica
Psat0s2898g0040 Pisum sativum
PSO151G0082 Papaver somniferum
PSO339G5531 Papaver somniferum
QL09p008735 Quercus lobata
RcHm_v2.0_Chr5g0064541 Rosa chinensis
RcHm_v2.0_Chr5g0064551 Rosa chinensis
RcHm_v2.0_Chr5g0064811 Rosa chinensis
RcHm_v2.0_Chr5g0064841 Rosa chinensis
Rhsim01G0227600 Rhododendron simsii
Sabra01G0116300 Salix brachista
Sabra01G0117800 Salix brachista
Sc21g0005490 Simmondsia chinensis
Sed0011846 Sechium edule
SEGI_06382 Sequoiadendron giganteum
SEGI_40255 Sequoiadendron giganteum
SGA_v2.0_scaffold154G37155 Striga asiatica
SGA_v2.0_scaffold47G17549 Striga asiatica
SHI01165 Sapria himalayana
SMO117G0168 Selaginella moellendorffii
Solyc08g005450.3 Solanum lycopersicum
Sopen08g001490 Solanum pennellii
Sp4g11720 Schrenkiella parvula
TAR100G0004 Trochodendron aralioides
TAR383G0008 Trochodendron aralioides
TAR455G0002 Trochodendron aralioides
TAR588G0001 Trochodendron aralioides
TAR625G0807 Trochodendron aralioides
TAR633G1457 Trochodendron aralioides
TAR636G3695 Trochodendron aralioides
TAR677G0002 Trochodendron aralioides
THA.LOC104800662 Tarenaya hassleriana
THA.LOC104826325 Tarenaya hassleriana
Thecc.09G321600 Theobroma cacao
Thecc.09G321800 Theobroma cacao
TPR.G18864 Trifolium pratense
TWI75G1679 Tripterygium wilfordii
TWI79G0464 Tripterygium wilfordii
unitig_0.g1557 Utricularia gibba
unitig_747.g22032 Utricularia gibba
vmacro05212 Vaccinium macrocarpon
VMungo0720G1898 Vigna mungo
Zm00001eb095710 Zea mays
Zm00001eb307410 Zea mays

User provided reference genes

Program Settings