Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p42320 Brassica napus
A09p25100 Brassica napus
Aa31LG2G6360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.148 Anthoceros agrestis
Actinidia08091 Actinidia chinensis
Actinidia08092 Actinidia chinensis
Actinidia25751 Actinidia chinensis
Actinidia30679 Actinidia chinensis
Ah.03g133810 Amaranthus hybridus
AL5G14640 Arabidopsis lyrata
Aqoxy5G03546 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06P6RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J0N2EL Arachis hypogaea
AT3G25980 Arabidopsis thaliana
ATR0686G191 Amborella trichopoda
Atru.chr11.2230 Acer truncatum
Atru.chr2.951 Acer truncatum
Atru.chr4.1238 Acer truncatum
Atru.chr9.690 Acer truncatum
AUR62005564 Chenopodium quinoa
AUR62024170 Chenopodium quinoa
BcaB01g02675 Brassica carinata
BcaB04g19721 Brassica carinata
BcaB07g30625 Brassica carinata
BcaC04g21407 Brassica carinata
BcaC06g33934 Brassica carinata
BolC7t44033H Brassica oleracea
BolC9t56064H Brassica oleracea
BraA09t38098Z Brassica rapa
C07p35010 Brassica napus
C09p32160 Brassica napus
CAN.G227.11 Capsicum annuum
CANSAT01G3139 Cannabis sativa
CARHR146960 Cardamine hirsuta
Carub.0005s0383 Capsella rubella
Ca_16490_v3 Cicer arietinum L.
CBR_g22979 Chara braunii
Cc11_g16480 Coffea canephora
Cc11_g17360 Coffea canephora
CDE02G3169 Ceratophyllum demersum
Ciclev10032763m.g Citrus clementina
CiPaw.05G173000 Carya illinoinensis
CiPaw.06G062900 Carya illinoinensis
ClCG05G026270 Citrullus lanatus
COL.COLO4_23607 Corchorus olitorius
Cpa.g.c35504 Carica papaya
Cre08.g380400 Chlamydomonas reinhardtii
CsaV3_5G030550 Cucumis sativus L.
CSS0008983 Camellia sinensis var. sinensis
DCAR_007019 Daucus carota
Dinv11000 Davidia involucrata
Dinv15224 Davidia involucrata
Dinv18160 Davidia involucrata
Dinv18164 Davidia involucrata
Duzib248G1503 Durio zibethinus
Duzib251G0102 Durio zibethinus
Duzib268G1570 Durio zibethinus
ECA246G2134 Erigeron canadensis
EL10Ac6g13425 Beta vulgaris
Eucgr.B03457 Eucalyptus grandis
FAN07G1447 Fragaria x ananassa
FAN12G3600 Fragaria x ananassa
FAN17G2208 Fragaria x ananassa
FAN22G1703 Fragaria x ananassa
FvH4_4g24620 Fragaria vesca
Glyma.11G247400 Glycine max
Glyma.18G009900 Glycine max
Gohir.A01G156300 Gossypium hirsutum
Gohir.A03G129700 Gossypium hirsutum
Gohir.D01G154000 Gossypium hirsutum
Gohir.D02G155000 Gossypium hirsutum
Gorai.002G190700 Gossypium raimondii
Gorai.005G172500 Gossypium raimondii
GSVIVG01010325001 Vitis vinifera
HanXRQChr01g0005811 Helianthus annuus
HanXRQChr06g0174811 Helianthus annuus
HanXRQChr10g0283671 Helianthus annuus
HanXRQChr11g0351801 Helianthus annuus
HanXRQChr13g0416091 Helianthus annuus
HanXRQChr14g0462331 Helianthus annuus
HanXRQChr17g0540031 Helianthus annuus
Haze_12338 Corylus avellana
Hma1.2p1_0079F.1_g041690 Hydrangea macrophylla
Hma1.2p1_3454F.1_g336085 Hydrangea macrophylla
HPP92_024295 Vanilla planifolia
HPP92_024302 Vanilla planifolia
Hund02761 Selenicereus undatus
Hund25435 Selenicereus undatus
Lalb_Chr08g0230731 Lupinus albus
Lj6g0000646 Lotus japonicus
Lsat_1_v5_gn_0_42421 Lactuca sativa
Lsat_1_v5_gn_3_29441 Lactuca sativa
Lsat_1_v5_gn_3_72261 Lactuca sativa
Manes.12G015800 Manihot esculenta
Manes.13G014900 Manihot esculenta
Mapoly0038s0109 Marchantia polymorpha
MBI11_g02883_MAGBIO Magnolia biondii
MCO12G028 Micromonas commoda
MD13G1109700 Malus domestica
MD16G1109600 Malus domestica
Medtr3g085940 Medicago truncatula
MELO3C011895.2 Cucumis melo
Migut.K00688 Erythranthe guttata
MSTRG.527 Avicennia marina
MSTRG.7971 Avicennia marina
Nitab4.5_0000581g0180 Nicotiana tabacum
Nitab4.5_0001898g0060 Nicotiana tabacum
Nn3g16555 Nelumbo nucifera
Oeu038665.1 Olea europaea
Oeu041690.1 Olea europaea
Oeu049161.1 Olea europaea
Oeu060827.1 Olea europaea
Os04g0486500 Oryza sativa ssp. japonica
Peaxi162Scf00128g00833 Petunia axillaris
PGR102G1366 Punica granatum
PGSC0003DMG400017457 Solanum tuberosum
Phvul.001G258800 Phaseolus vulgaris
Potri.008G179600 Populus trichocarpa
Potri.010G055100 Populus trichocarpa
Pp3c4_13910 Physcomitrium patens
PRCOL_00002054 Prasinoderma coloniale
Prupe.1G235300 Prunus persica
Prupe.1G235600 Prunus persica
Psat5g093080 Pisum sativum
PSO063G1359 Papaver somniferum
PSO782G3312 Papaver somniferum
QL03p055286 Quercus lobata
QL11p019873 Quercus lobata
QL11p019923 Quercus lobata
RcHm_v2.0_Chr4g0431671 Rosa chinensis
Rhsim12G0035500 Rhododendron simsii
Sabra08G0137200 Salix brachista
Sabra10G0049900 Salix brachista
SalBow2G2451 Salvia bowleyana
SalBow8G5054 Salvia bowleyana
Sc04g0009910 Simmondsia chinensis
Sed0021695 Sechium edule
Sed0023640 Sechium edule
SEGI_13539 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00563 Striga asiatica
SMO201G0213 Selaginella moellendorffii
Solyc05g014370.3 Solanum lycopersicum
Sopen05g009500 Solanum pennellii
Sp2g15200 Schrenkiella parvula
TAR629G1273 Trochodendron aralioides
THA.LOC104805258 Tarenaya hassleriana
Thecc.02G273100 Theobroma cacao
Thhalv10004915m.g Eutrema salsugineum
TPR.G22441 Trifolium pratense
TWI18G0072 Tripterygium wilfordii
TWI75G1255 Tripterygium wilfordii
unitig_8.g3141 Utricularia gibba
vmacro01089 Vaccinium macrocarpon
VMungo1383G2932 Vigna mungo
Zm00001eb079190 Zea mays
Zm00001eb425240 Zea mays

User provided reference genes

Program Settings