Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31080 Brassica napus
Aa31LG1G17480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3115__3116 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3324__3325 Anthoceros agrestis
Actinidia00323 Actinidia chinensis
Actinidia02411 Actinidia chinensis
Ah.01g011940 Amaranthus hybridus
Ah.01g024170 Amaranthus hybridus
AL8G35270 Arabidopsis lyrata
AL8G41790 Arabidopsis lyrata
Aqoxy6G00637 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BVLY6P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GE1IDC Arachis hypogaea
AT5G64420 Arabidopsis thaliana
ATR0800G038 Amborella trichopoda
Atru.chr6.1353 Acer truncatum
Atru.chr6.1354 Acer truncatum
AUR62027080 Chenopodium quinoa
AUR62030919 Chenopodium quinoa
BcaB07g29742 Brassica carinata
BcaC03g18261 Brassica carinata
BcaC03g18262 Brassica carinata
BolC2t12404H Brassica oleracea
BolC3t18446H Brassica oleracea
BraA02t09256Z Brassica rapa
BraA06t26051Z Brassica rapa
C02p63340 Brassica napus
C02p63350 Brassica napus
C02p63360 Brassica napus
C03p61860 Brassica napus
CAN.G504.43 Capsicum annuum
CAN.G504.46 Capsicum annuum
CANSAT54G0310 Cannabis sativa
CARHR278390 Cardamine hirsuta
Carub.0008s2522 Capsella rubella
Ca_00181_v3 Cicer arietinum L.
CBR_g52045 Chara braunii
Cc02_g20590 Coffea canephora
CDE05G2025 Ceratophyllum demersum
Cfa004803 Carpinus fangiana
Cfa025397 Carpinus fangiana
Ciclev10027696m.g Citrus clementina
CiPaw.06G160900 Carya illinoinensis
ClCG09G016480 Citrullus lanatus
Cpa.g.sc20.40 Carica papaya
Cre01.g012350 Chlamydomonas reinhardtii
CsaV3_7G007430 Cucumis sativus L.
CSS0000676 Camellia sinensis var. sinensis
CSS0013617 Camellia sinensis var. sinensis
DCAR_021895 Daucus carota
Dinv08967 Davidia involucrata
Dinv08968 Davidia involucrata
Dinv16031 Davidia involucrata
Dinv16032 Davidia involucrata
Duzib132G0551 Durio zibethinus
Duzib132G1253 Durio zibethinus
ECA240G2418 Erigeron canadensis
EL10Ac9g22127 Beta vulgaris
Eucgr.I02582 Eucalyptus grandis
FAN15G2368 Fragaria x ananassa
FAN20G2876 Fragaria x ananassa
FAN24G1132 Fragaria x ananassa
FAN27G2619 Fragaria x ananassa
FvH4_2g11160 Fragaria vesca
Glyma.13G254600 Glycine max
Glyma.15G060100 Glycine max
Gohir.A13G049500 Gossypium hirsutum
Gohir.D02G202550 Gossypium hirsutum
Gohir.D13G048000 Gossypium hirsutum
Gorai.005G227500 Gossypium raimondii
Gorai.013G053600 Gossypium raimondii
GSVIVG01038520001 Vitis vinifera
HanXRQChr03g0071051 Helianthus annuus
Haze_10395 Corylus avellana
Hma1.2p1_0908F.1_g235670 Hydrangea macrophylla
HPP92_024099 Vanilla planifolia
Hund06479 Selenicereus undatus
Lalb_Chr18g0060301 Lupinus albus
Lj6g0005540 Lotus japonicus
Lj9C342T12 Lonicera japonica
Lsat_1_v5_gn_8_42860 Lactuca sativa
Lsat_1_v5_gn_9_113661 Lactuca sativa
Lsat_1_v5_gn_9_113760 Lactuca sativa
Manes.10G093300 Manihot esculenta
Manes.10G094200 Manihot esculenta
Mapoly0136s0021 Marchantia polymorpha
MBI16_g10454_MAGBIO Magnolia biondii
MCO10G087 Micromonas commoda
MD05G1049800 Malus domestica
MD10G1056900 Malus domestica
Medtr2g010110 Medicago truncatula
Medtr2g086320 Medicago truncatula
MELO3C018559.2 Cucumis melo
Migut.B00522 Erythranthe guttata
MSTRG.16633 Avicennia marina
Nitab4.5_0001405g0010 Nicotiana tabacum
Nitab4.5_0001405g0020 Nicotiana tabacum
Nitab4.5_0001405g0040 Nicotiana tabacum
Nitab4.5_0002335g0010 Nicotiana tabacum
Nitab4.5_0003026g0050 Nicotiana tabacum
Nitab4.5_0005163g0020 Nicotiana tabacum
Nitab4.5_0005163g0030 Nicotiana tabacum
Nn1g07286 Nelumbo nucifera
Nn2g13574 Nelumbo nucifera
Nn8g41203 Nelumbo nucifera
Oeu033795.2 Olea europaea
Oeu042393.4 Olea europaea
Os02g0135700 Oryza sativa ssp. japonica
Peaxi162Scf00016g03257 Petunia axillaris
Peaxi162Scf00016g03462 Petunia axillaris
PGR142G1680 Punica granatum
PGSC0003DMG400010676 Solanum tuberosum
Phvul.006G199700 Phaseolus vulgaris
Potri.001G285600 Populus trichocarpa
Potri.009G079900 Populus trichocarpa
Pp3c13_11570 Physcomitrium patens
Pp3c3_9940 Physcomitrium patens
Prupe.8G075100 Prunus persica
Psat1g212840 Pisum sativum
Psat5g050320 Pisum sativum
PSO017G1610 Papaver somniferum
PSO478G3191 Papaver somniferum
QL11p026607 Quercus lobata
RcHm_v2.0_Chr1g0357401 Rosa chinensis
RcHm_v2.0_Chr6g0269481 Rosa chinensis
Sabra09G0061900 Salix brachista
Sabra16G0178000 Salix brachista
SalBow1G8382 Salvia bowleyana
SalBow6G5524 Salvia bowleyana
Sc06g0005830 Simmondsia chinensis
Sed0001753 Sechium edule
Sed0014665 Sechium edule
SEGI_31749 Sequoiadendron giganteum
SGA_v2.0_scaffold32G12947 Striga asiatica
SGA_v2.0_scaffold83G26394 Striga asiatica
SHI04921 Sapria himalayana
SMO358G0564 Selaginella moellendorffii
Solyc01g106220.4 Solanum lycopersicum
Solyc01g106270.1 Solanum lycopersicum
Sopen01g048630 Solanum pennellii
Sp2g27510 Schrenkiella parvula
TAR628G0793 Trochodendron aralioides
THA.LOC104799703 Tarenaya hassleriana
THA.LOC104818461 Tarenaya hassleriana
Thecc.02G125000 Theobroma cacao
Thhalv10003522m.g Eutrema salsugineum
TPR.G32637 Trifolium pratense
TWI59G0488 Tripterygium wilfordii
unitig_21.g20701 Utricularia gibba
unitig_744.g24197 Utricularia gibba
vmacro06228 Vaccinium macrocarpon
vmacro19391 Vaccinium macrocarpon
VMungo0540G1852 Vigna mungo
Zm00001eb132650 Zea mays
Zm00001eb156660 Zea mays
Zm00001eb231630 Zea mays

User provided reference genes

Program Settings