Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00520 Brassica napus
Aa31LG1G28690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2732 Anthoceros agrestis
Actinidia17899 Actinidia chinensis
Actinidia21399 Actinidia chinensis
Actinidia21400 Actinidia chinensis
Actinidia21401 Actinidia chinensis
Actinidia21402 Actinidia chinensis
Ah.02g112260 Amaranthus hybridus
Ah.11g049220 Amaranthus hybridus
Aqoxy2G02766 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.04PXL7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5GBA6 Arachis hypogaea
AT2G47390 Arabidopsis thaliana
ATR0796G129 Amborella trichopoda
Atru.chr5.996 Acer truncatum
Atru.chr5.997 Acer truncatum
AUR62011802 Chenopodium quinoa
AUR62024648 Chenopodium quinoa
BcaB02g08775 Brassica carinata
BcaC02g06972 Brassica carinata
BcaC02g12572 Brassica carinata
BcaC02g12575 Brassica carinata
BolC4t21687H Brassica oleracea
BolC4t28757H Brassica oleracea
BraA05t19050Z Brassica rapa
C04p00470 Brassica napus
C04p00490 Brassica napus
C04p00510 Brassica napus
C04p72760 Brassica napus
CAN.G100.80 Capsicum annuum
CANSAT11G0445 Cannabis sativa
CARHR142780 Cardamine hirsuta
Carub.0004s3011 Capsella rubella
Ca_09212_v3 Cicer arietinum L.
CBR_g25724 Chara braunii
Cc01_g21440 Coffea canephora
CDE02G1789 Ceratophyllum demersum
CDE08G1239 Ceratophyllum demersum
Cfa005794 Carpinus fangiana
Cfa005796 Carpinus fangiana
Cfa005797 Carpinus fangiana
Ciclev10000356m.g Citrus clementina
Ciclev10018865m.g Citrus clementina
CiPaw.07G117600 Carya illinoinensis
ClCG09G005080 Citrullus lanatus
COL.COLO4_23230 Corchorus olitorius
Cpa.g.sc18.45 Carica papaya
Cre07.g313122 Chlamydomonas reinhardtii
Cre14.g629102 Chlamydomonas reinhardtii
CsaV3_7G029970 Cucumis sativus L.
CSS0014890 Camellia sinensis var. sinensis
DCAR_018298 Daucus carota
Dinv10101 Davidia involucrata
Dinv33117 Davidia involucrata
Dinv33118 Davidia involucrata
Duzib133G0239 Durio zibethinus
Duzib138G1936 Durio zibethinus
ECA232G0051 Erigeron canadensis
ECA232G2110 Erigeron canadensis
ECA236G4246 Erigeron canadensis
Eucgr.H01014 Eucalyptus grandis
Eucgr.H01015 Eucalyptus grandis
FAN04G3181 Fragaria x ananassa
FAN08G2138 Fragaria x ananassa
FAN13G1327 Fragaria x ananassa
FAN18G2042 Fragaria x ananassa
FvH4_5g39170 Fragaria vesca
Glyma.03G219500 Glycine max
Glyma.19G216400 Glycine max
Gohir.A12G124600 Gossypium hirsutum
Gohir.D12G128500 Gossypium hirsutum
Gorai.008G139300 Gossypium raimondii
GSVIVG01028121001 Vitis vinifera
HanXRQChr04g0106121 Helianthus annuus
HanXRQChr06g0168141 Helianthus annuus
Haze_04782 Corylus avellana
Haze_05044 Corylus avellana
Haze_05045 Corylus avellana
Haze_05046 Corylus avellana
HPP92_008950 Vanilla planifolia
Hund09631 Selenicereus undatus
Lalb_Chr04g0259961 Lupinus albus
Lalb_Chr15g0078141 Lupinus albus
Lj1C17G9 Lonicera japonica
Lj1g0019327 Lotus japonicus
Lj2A1206G24 Lonicera japonica
Lj2C1205T10 Lonicera japonica
Lsat_1_v5_gn_8_1000 Lactuca sativa
Lsat_1_v5_gn_8_166941 Lactuca sativa
Manes.05G003600 Manihot esculenta
Mapoly0032s0164 Marchantia polymorpha
Mapoly0049s0016 Marchantia polymorpha
Mapoly0893s0002 Marchantia polymorpha
Mapoly1060s0001 Marchantia polymorpha
Mapoly4207s0001 Marchantia polymorpha
MBI18_g17316_MAGBIO Magnolia biondii
MCO09G418 Micromonas commoda
MD00G1179100 Malus domestica
MD00G1179200 Malus domestica
MD03G1294700 Malus domestica
Medtr7g109530 Medicago truncatula
MELO3C015923.2 Cucumis melo
Migut.D00082 Erythranthe guttata
MSTRG.18101 Avicennia marina
Nitab4.5_0003540g0030 Nicotiana tabacum
Nitab4.5_0008277g0040 Nicotiana tabacum
Nn3g19817 Nelumbo nucifera
Nn3g21693 Nelumbo nucifera
Nn6g32423 Nelumbo nucifera
Oeu008475.1 Olea europaea
Os03g0307100 Oryza sativa ssp. japonica
Os07g0689400 Oryza sativa ssp. japonica
Peaxi162Scf00691g00219 Petunia axillaris
Phvul.001G213000 Phaseolus vulgaris
Potri.002G196000 Populus trichocarpa
Potri.014G120600 Populus trichocarpa
Pp3c23_15570 Physcomitrium patens
Pp3c25_7720 Physcomitrium patens
Pp3c6_17840 Physcomitrium patens
PRCOL_00005843 Prasinoderma coloniale
Prupe.8G266800 Prunus persica
Psat3g019800 Pisum sativum
PSO210G5154 Papaver somniferum
PSO761G0108 Papaver somniferum
QL12p019917 Quercus lobata
RcHm_v2.0_Chr5g0055721 Rosa chinensis
RcHm_v2.0_Chr5g0055731 Rosa chinensis
RcHm_v2.0_Chr7g0241201 Rosa chinensis
RcHm_v2.0_Chr7g0241431 Rosa chinensis
Rhsim13G0005000 Rhododendron simsii
Sabra14G0089400 Salix brachista
SalBow3G1126 Salvia bowleyana
Sc17g0000440 Simmondsia chinensis
Sed0011993 Sechium edule
Sed0028068 Sechium edule
SEGI_04992 Sequoiadendron giganteum
SEGI_07403 Sequoiadendron giganteum
SGA_v2.0_scaffold334G49068 Striga asiatica
SHI28963 Sapria himalayana
SMO200G0105 Selaginella moellendorffii
SMO365G0028 Selaginella moellendorffii
Solyc01g079450.3 Solanum lycopersicum
Sopen01g031220 Solanum pennellii
Sp4g29330 Schrenkiella parvula
TAR362G0927 Trochodendron aralioides
TAR633G2306 Trochodendron aralioides
THA.LOC104817457 Tarenaya hassleriana
Thecc.01G313700 Theobroma cacao
Thhalv10001294m.g Eutrema salsugineum
TPR.G4093 Trifolium pratense
TPR.G4133 Trifolium pratense
TWI18G0165 Tripterygium wilfordii
vmacro02405 Vaccinium macrocarpon
VMungo1383G2746 Vigna mungo
Zm00001eb014640 Zea mays

User provided reference genes

Program Settings