Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00750 Brassica napus
A08p23310 Brassica napus
Aa31LG6G15430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2671 Anthoceros agrestis
Actinidia36592 Actinidia chinensis
AL7G12070 Arabidopsis lyrata
Aqoxy6G00812 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4BU7T8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2VPH2 Arachis hypogaea
AT4G39840 Arabidopsis thaliana
ATR0564G070 Amborella trichopoda
Atru.chr4.84 Acer truncatum
BcaNung00905 Brassica carinata
BcaNung05325 Brassica carinata
BolC1t00087H Brassica oleracea
BolC3t20095H Brassica oleracea
BraA01t00078Z Brassica rapa
BraA08t34286Z Brassica rapa
C01p00860 Brassica napus
C03p78370 Brassica napus
CAN.G480.1 Capsicum annuum
CANSAT01G2418 Cannabis sativa
CARHR246860 Cardamine hirsuta
Carub.0007s0176 Capsella rubella
CBR_g45841 Chara braunii
CBR_g57642 Chara braunii
Cc00_g16220 Coffea canephora
Cfa002676 Carpinus fangiana
Ciclev10027598m.g Citrus clementina
CiPaw.03G141100 Carya illinoinensis
CiPaw.04G098700 Carya illinoinensis
ClCG01G018830 Citrullus lanatus
COL.COLO4_09954 Corchorus olitorius
Cpa.g.sc621.1 Carica papaya
CsaV3_6G045490 Cucumis sativus L.
CSS0006663 Camellia sinensis var. sinensis
DCAR_001485 Daucus carota
DCAR_011511 Daucus carota
DCAR_014230 Daucus carota
Duzib147G0720 Durio zibethinus
Duzib264G0234 Durio zibethinus
Eucgr.I00428 Eucalyptus grandis
FAN19G1231 Fragaria x ananassa
FAN23G0181 Fragaria x ananassa
FAN26G2002 Fragaria x ananassa
FAN28G0529 Fragaria x ananassa
Glyma.05G179100 Glycine max
Glyma.08G136600 Glycine max
Glyma.11G239700 Glycine max
Glyma.18G017700 Glycine max
Gohir.A02G143600 Gossypium hirsutum
Gohir.A11G200900 Gossypium hirsutum
Gohir.D03G036900 Gossypium hirsutum
Gohir.D11G222100 Gossypium hirsutum
Gorai.003G038700 Gossypium raimondii
Gorai.007G239400 Gossypium raimondii
HanXRQChr17g0543271 Helianthus annuus
Haze_24945 Corylus avellana
Hma1.2p1_0047F.1_g027890 Hydrangea macrophylla
Hma1.2p1_0308F.1_g120150 Hydrangea macrophylla
HPP92_016347 Vanilla planifolia
Lalb_Chr07g0185151 Lupinus albus
Lj2P550T25 Lonicera japonica
Lj4g0007261 Lotus japonicus
Lj4g0017498 Lotus japonicus
Lj6g0008145 Lotus japonicus
Lsat_1_v5_gn_4_142741 Lactuca sativa
Lsat_1_v5_gn_5_43821 Lactuca sativa
Manes.12G135900 Manihot esculenta
Manes.13G075300 Manihot esculenta
Mapoly0036s0106 Marchantia polymorpha
MBI02_g08733_MAGBIO Magnolia biondii
MCO08G346 Micromonas commoda
MD01G1028100 Malus domestica
MD15G1325300 Malus domestica
Medtr3g087360 Medicago truncatula
Medtr8g090265 Medicago truncatula
MELO3C007762.2 Cucumis melo
Migut.L00115 Erythranthe guttata
MSTRG.23340 Avicennia marina
MSTRG.2565 Avicennia marina
MSTRG.3785 Avicennia marina
Nitab4.5_0000004g0340 Nicotiana tabacum
Nitab4.5_0000104g0160 Nicotiana tabacum
Nitab4.5_0000897g0030 Nicotiana tabacum
Oeu002176.1 Olea europaea
Oeu054841.2 Olea europaea
Os08g0411300 Oryza sativa ssp. japonica
Peaxi162Scf00805g00021 Petunia axillaris
PGR004G1209 Punica granatum
PGSC0003DMG400001895 Solanum tuberosum
PGSC0003DMG400023187 Solanum tuberosum
Phvul.001G251700 Phaseolus vulgaris
Phvul.002G255300 Phaseolus vulgaris
Potri.005G076500 Populus trichocarpa
Potri.007G091900 Populus trichocarpa
Pp3c24_14210 Physcomitrium patens
Pp3c8_17900 Physcomitrium patens
Prupe.6G184700 Prunus persica
Psat5g089640 Pisum sativum
Psat7g054320 Pisum sativum
PSO541G4803 Papaver somniferum
PSO781G0272 Papaver somniferum
QL06p049779 Quercus lobata
RcHm_v2.0_Chr2g0114541 Rosa chinensis
Rhsim10G0161200 Rhododendron simsii
Sabra05G0063000 Salix brachista
Sabra07G0075500 Salix brachista
SalBow3G2946 Salvia bowleyana
Sc16g0005630 Simmondsia chinensis
Sed0008262 Sechium edule
Sed0024330 Sechium edule
SEGI_28024 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13594 Striga asiatica
SGA_v2.0_scaffold47G17783 Striga asiatica
SHI11535 Sapria himalayana
SMO012G0039 Selaginella moellendorffii
Solyc03g078640.1 Solanum lycopersicum
Solyc04g055090.1 Solanum lycopersicum
Sopen03g021540 Solanum pennellii
Sopen04g024940 Solanum pennellii
Sp7g36050 Schrenkiella parvula
TAR381G0611 Trochodendron aralioides
TAR625G0843 Trochodendron aralioides
THA.LOC104807698 Tarenaya hassleriana
THA.LOC104824872 Tarenaya hassleriana
Thecc.01G102700 Theobroma cacao
Thhalv10026765m.g Eutrema salsugineum
TPR.G17843 Trifolium pratense
TPR.G6250 Trifolium pratense
TWI53G1309 Tripterygium wilfordii
TWI77G0153 Tripterygium wilfordii
unitig_32.g11813 Utricularia gibba
unitig_748.g8654 Utricularia gibba
unitig_88.g27724 Utricularia gibba
VMungo0251G2127 Vigna mungo
VMungo1383G1250 Vigna mungo
VMungo1383G1435 Vigna mungo
Zm00001eb001010 Zea mays
Zm00001eb008600 Zea mays
Zm00001eb024090 Zea mays
Zm00001eb030060 Zea mays
Zm00001eb119110 Zea mays
Zm00001eb168110 Zea mays
Zm00001eb210920 Zea mays
Zm00001eb272120 Zea mays
Zm00001eb272130 Zea mays
Zm00001eb272140 Zea mays
Zm00001eb295260 Zea mays
Zm00001eb310240 Zea mays
Zm00001eb310250 Zea mays
Zm00001eb332070 Zea mays
Zm00001eb332080 Zea mays
Zm00001eb342160 Zea mays
Zm00001eb342170 Zea mays
Zm00001eb410580 Zea mays

User provided reference genes

Program Settings