Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12840 Brassica napus
Aa31LG6G3550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2891 Anthoceros agrestis
Actinidia29288 Actinidia chinensis
AL7G32500 Arabidopsis lyrata
AL7G32520 Arabidopsis lyrata
Aqoxy7G03085 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea
AT4G21530 Arabidopsis thaliana
ATR0580G317 Amborella trichopoda
Atru.chr10.2003 Acer truncatum
AUR62014723 Chenopodium quinoa
AUR62016904 Chenopodium quinoa
BcaC09g51334 Brassica carinata
BcaC09g51337 Brassica carinata
BcaC09g51339 Brassica carinata
BcaNung02789 Brassica carinata
BcaNung02790 Brassica carinata
BolC1t01500H Brassica oleracea
BraA01t01228Z Brassica rapa
C01p15460 Brassica napus
CAN.G1181.24 Capsicum annuum
CANSAT56G3558 Cannabis sativa
CARHR228190 Cardamine hirsuta
Carub.0007s1989 Capsella rubella
Ca_18485_v3 Cicer arietinum L.
Ca_18486_v3 Cicer arietinum L.
CBR_g50890 Chara braunii
Cc02_g12490 Coffea canephora
CDE02G2476 Ceratophyllum demersum
Cfa000358 Carpinus fangiana
Ciclev10014364m.g Citrus clementina
CiPaw.09G158300 Carya illinoinensis
ClCG01G022700 Citrullus lanatus
COL.COLO4_31575 Corchorus olitorius
Cpa.g.sc27.117 Carica papaya
Cre12.g556650 Chlamydomonas reinhardtii
CsaV3_1G030810 Cucumis sativus L.
CSS0002071 Camellia sinensis var. sinensis
CSS0005991 Camellia sinensis var. sinensis
CSS0023832 Camellia sinensis var. sinensis
CSS0025603 Camellia sinensis var. sinensis
CSS0036547 Camellia sinensis var. sinensis
CSS0038861 Camellia sinensis var. sinensis
CSS0039613 Camellia sinensis var. sinensis
CSS0042439 Camellia sinensis var. sinensis
DCAR_004136 Daucus carota
Dinv39815 Davidia involucrata
Duzib160G0757 Durio zibethinus
ECA234G0402 Erigeron canadensis
EL10Ac3g05965 Beta vulgaris
EL10Ac6g14063 Beta vulgaris
EL10Ac8g20612 Beta vulgaris
EL10Ac9g22460 Beta vulgaris
Eucgr.C00011 Eucalyptus grandis
Eucgr.C00026 Eucalyptus grandis
Eucgr.C00045 Eucalyptus grandis
Eucgr.D02662 Eucalyptus grandis
Eucgr.D02667 Eucalyptus grandis
Eucgr.E01958 Eucalyptus grandis
Eucgr.E03497 Eucalyptus grandis
Eucgr.E03552 Eucalyptus grandis
Eucgr.E03557 Eucalyptus grandis
Eucgr.E03560 Eucalyptus grandis
Eucgr.L00388 Eucalyptus grandis
FAN11G0019 Fragaria x ananassa
FAN16G1451 Fragaria x ananassa
FAN25G3623 Fragaria x ananassa
FvH4_3g04050 Fragaria vesca
Glyma.07G190600 Glycine max
Gohir.A10G020800 Gossypium hirsutum
Gohir.D10G021600 Gossypium hirsutum
Gorai.011G022700 Gossypium raimondii
GSVIVG01003202001 Vitis vinifera
GSVIVG01003206001 Vitis vinifera
HanXRQChr17g0551051 Helianthus annuus
Haze_06207 Corylus avellana
Haze_06568 Corylus avellana
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla
HPP92_015366 Vanilla planifolia
Hund23620 Selenicereus undatus
Hund23621 Selenicereus undatus
Lalb_Chr05g0218181 Lupinus albus
Lj2A281G21 Lonicera japonica
Lj4g0008048 Lotus japonicus
Lsat_1_v5_gn_4_57080 Lactuca sativa
Manes.15G100000 Manihot esculenta
Mapoly0038s0098 Marchantia polymorpha
MBI16_g41806_MAGBIO Magnolia biondii
MCO05G135 Micromonas commoda
MD10G1303000 Malus domestica
Medtr4g090990 Medicago truncatula
MELO3C008912.2 Cucumis melo
MELO3C025319.2 Cucumis melo
MELO3C032683.2 Cucumis melo
Migut.E00415 Erythranthe guttata
Nitab4.5_0000190g0180 Nicotiana tabacum
Nitab4.5_0003574g0090 Nicotiana tabacum
Nn2g12691 Nelumbo nucifera
Oeu053939.3 Olea europaea
Os02g0785900 Oryza sativa ssp. japonica
Peaxi162Scf00588g01013 Petunia axillaris
PGR042G3654 Punica granatum
Phvul.002G222500 Phaseolus vulgaris
Potri.004G034900 Populus trichocarpa
Pp3c19_17530 Physcomitrium patens
PRCOL_00000091 Prasinoderma coloniale
Prupe.4G036500 Prunus persica
Psat7g109640 Pisum sativum
PSO063G3544 Papaver somniferum
PSO782G2217 Papaver somniferum
QL02p031126 Quercus lobata
QL03p053091 Quercus lobata
QL05p081970 Quercus lobata
RcHm_v2.0_Chr5g0006431 Rosa chinensis
RcHm_v2.0_Chr5g0006531 Rosa chinensis
Sabra04G0020600 Salix brachista
SalBow7G0840 Salvia bowleyana
SalBow7G0885 Salvia bowleyana
Sc17g0006590 Simmondsia chinensis
Sed0019970 Sechium edule
SEGI_08767 Sequoiadendron giganteum
SEGI_33901 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37668 Striga asiatica
SGA_v2.0_scaffold92G28242 Striga asiatica
SHI02114 Sapria himalayana
SHI02115 Sapria himalayana
SHI02118 Sapria himalayana
SHI02119 Sapria himalayana
SHI02120 Sapria himalayana
SHI02121 Sapria himalayana
SMO119G0264 Selaginella moellendorffii
Solyc02g079050.3 Solanum lycopersicum
Sopen02g023860 Solanum pennellii
Sp7g19640 Schrenkiella parvula
TAR369G0180 Trochodendron aralioides
TAR626G0166 Trochodendron aralioides
THA.LOC104812734 Tarenaya hassleriana
Thecc.06G198700 Theobroma cacao
Thhalv10024471m.g Eutrema salsugineum
TPR.G32417 Trifolium pratense
TWI38G2153 Tripterygium wilfordii
unitig_8.g3351 Utricularia gibba
unitig_8.g3352 Utricularia gibba
vmacro03819 Vaccinium macrocarpon
VMungo0251G3002 Vigna mungo
Zm00001eb125490 Zea mays
Zm00001eb192820 Zea mays
Zm00001eb266270 Zea mays
Zm00001eb374130 Zea mays
Zm00001eb384090 Zea mays

User provided reference genes

Program Settings