Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p58650 Brassica napus
Aa31LG8G17800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis
Actinidia12466 Actinidia chinensis
Actinidia18535 Actinidia chinensis
Ah.01g005210 Amaranthus hybridus
Ah.01g014420 Amaranthus hybridus
AL3G54160 Arabidopsis lyrata
Aqoxy1G03905 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea
AT2G20890 Arabidopsis thaliana
ATR0693G119 Amborella trichopoda
Atru.chr6.3084 Acer truncatum
AUR62032763 Chenopodium quinoa
AUR62037119 Chenopodium quinoa
BcaB08g34948 Brassica carinata
BcaC07g41186 Brassica carinata
BolC8t51757H Brassica oleracea
BraA09t41251Z Brassica rapa
C08p41940 Brassica napus
CAN.G508.2 Capsicum annuum
CANSAT64G1156 Cannabis sativa
CARHR111640 Cardamine hirsuta
Carub.0003s3556 Capsella rubella
Ca_01544_v3 Cicer arietinum L.
Ca_20707_v3 Cicer arietinum L.
CBR_g78876 Chara braunii
Cc05_g06070 Coffea canephora
CDE05G0433 Ceratophyllum demersum
CDE05G0437 Ceratophyllum demersum
Cfa014528 Carpinus fangiana
Ciclev10016098m.g Citrus clementina
CiPaw.03G168300 Carya illinoinensis
CiPaw.04G122300 Carya illinoinensis
ClCG00G002920 Citrullus lanatus
ClCG02G001360 Citrullus lanatus
ClCG02G001370 Citrullus lanatus
COL.COLO4_13659 Corchorus olitorius
Cpa.g.sc34.79 Carica papaya
Cpa.g.sc34.80 Carica papaya
Cre13.g562850 Chlamydomonas reinhardtii
CsaV3_7G004070 Cucumis sativus L.
CSS0004933 Camellia sinensis var. sinensis
CSS0017466 Camellia sinensis var. sinensis
CSS0020863 Camellia sinensis var. sinensis
DCAR_012973 Daucus carota
DCAR_019200 Daucus carota
Dinv13829 Davidia involucrata
Dinv15502 Davidia involucrata
Duzib052G1220 Durio zibethinus
Duzib132G0437 Durio zibethinus
Duzib132G0466 Durio zibethinus
Duzib248G0290 Durio zibethinus
ECA246G4617 Erigeron canadensis
EL10Ac9g20731 Beta vulgaris
Eucgr.A01774 Eucalyptus grandis
FAN02G1121 Fragaria x ananassa
FAN02G3511 Fragaria x ananassa
FAN05G4368 Fragaria x ananassa
FAN09G1462 Fragaria x ananassa
FAN14G2207 Fragaria x ananassa
FvH4_6g44420 Fragaria vesca
Glyma.06G299100 Glycine max
Glyma.12G106600 Glycine max
Glyma.12G200200 Glycine max
Glyma.13G302100 Glycine max
Glyma.15G250600 Glycine max
Gohir.A04G106100 Gossypium hirsutum
Gohir.D04G146200 Gossypium hirsutum
Gorai.012G132100 Gossypium raimondii
GSVIVG01029990001 Vitis vinifera
HanXRQChr06g0171121 Helianthus annuus
Haze_13070 Corylus avellana
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla
HPP92_012362 Vanilla planifolia
Lalb_Chr01g0005451 Lupinus albus
Lalb_Chr22g0356311 Lupinus albus
Lj1C737G5 Lonicera japonica
Lj3g0013026 Lotus japonicus
Lj3g0017119 Lotus japonicus
Lj8C118T0 Lonicera japonica
Lsat_1_v5_gn_3_40720 Lactuca sativa
Manes.13G152400 Manihot esculenta
Mapoly0010s0156 Marchantia polymorpha
MBI18_g27693_MAGBIO Magnolia biondii
MCO07G428 Micromonas commoda
MD09G1097200 Malus domestica
MD17G1085500 Malus domestica
Medtr2g089795 Medicago truncatula
Medtr4g045980 Medicago truncatula
MELO3C018772.2 Cucumis melo
Migut.H01014 Erythranthe guttata
MSTRG.14176 Avicennia marina
Nitab4.5_0000769g0070 Nicotiana tabacum
Nitab4.5_0001019g0090 Nicotiana tabacum
Nitab4.5_0001019g0110 Nicotiana tabacum
Nn1g03859 Nelumbo nucifera
Nn1g06795 Nelumbo nucifera
Nn1g06798 Nelumbo nucifera
Oeu029438.1 Olea europaea
Oeu037167.1 Olea europaea
Os07g0558500 Oryza sativa ssp. japonica
Peaxi162Scf00007g02516 Petunia axillaris
PGR042G1100 Punica granatum
PGSC0003DMG400018330 Solanum tuberosum
Phvul.005G108600 Phaseolus vulgaris
Phvul.011G110700 Phaseolus vulgaris
Potri.013G148400 Populus trichocarpa
Potri.019G117900 Populus trichocarpa
Pp3c19_17570 Physcomitrium patens
Pp3c21_14540 Physcomitrium patens
PRCOL_00003577 Prasinoderma coloniale
Prupe.3G228700 Prunus persica
Psat5g269080 Pisum sativum
Psat7g149680 Pisum sativum
PSO541G1277 Papaver somniferum
PSO675G0243 Papaver somniferum
QL08p036998 Quercus lobata
RcHm_v2.0_Chr2g0161411 Rosa chinensis
Rhsim06G0153100 Rhododendron simsii
Sabra13G0119700 Salix brachista
Sabra19G0118300 Salix brachista
Sabra19G0118700 Salix brachista
Sabra19G0135300 Salix brachista
SalBow1G2826 Salvia bowleyana
SalBow7G2858 Salvia bowleyana
Sc12g0002690 Simmondsia chinensis
Sc12g0003940 Simmondsia chinensis
Sed0002097 Sechium edule
Sed0025834 Sechium edule
SEGI_32441 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13911 Striga asiatica
SGA_v2.0_scaffold70G23458 Striga asiatica
SMO266G0053 Selaginella moellendorffii
Sopen07g028730 Solanum pennellii
Sp3g34160 Schrenkiella parvula
TAR627G0814 Trochodendron aralioides
TAR629G1482 Trochodendron aralioides
THA.LOC104804073 Tarenaya hassleriana
Thecc.02G170400 Theobroma cacao
Thhalv10002049m.g Eutrema salsugineum
TPR.G18073 Trifolium pratense
TPR.G21652 Trifolium pratense
TWI36G0222 Tripterygium wilfordii
TWI75G0473 Tripterygium wilfordii
unitig_21.g20001 Utricularia gibba
vmacro12257 Vaccinium macrocarpon
VMungo0720G1089 Vigna mungo
VMungo1080G0396 Vigna mungo
VMungo1127G2245 Vigna mungo
Zm00001eb106830 Zea mays
Zm00001eb324100 Zea mays

User provided reference genes

Program Settings