Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p62590 Brassica napus
A09p56940 Brassica napus
Aa31LG7G13600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis
Actinidia12037 Actinidia chinensis
Actinidia36476 Actinidia chinensis
Ah.01g017900 Amaranthus hybridus
Ah.02g125990 Amaranthus hybridus
AL4G13280 Arabidopsis lyrata
AL7G17310 Arabidopsis lyrata
Aqoxy2G01254 Aquilegia oxysepala
Aqoxy4G02413 Aquilegia oxysepala
Aqoxy6G01262 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea
AT2G23370 Arabidopsis thaliana
AT4G34090 Arabidopsis thaliana
ATR0724G029 Amborella trichopoda
Atru.chr3.293 Acer truncatum
Atru.chr5.2643 Acer truncatum
Atru.chr5.2649 Acer truncatum
AUR62001905 Chenopodium quinoa
AUR62003906 Chenopodium quinoa
AUR62010252 Chenopodium quinoa
AUR62013234 Chenopodium quinoa
BcaC07g40988 Brassica carinata
BcaNung03359 Brassica carinata
BolC7t46455H Brassica oleracea
BolC8t51563H Brassica oleracea
BraA03t15329Z Brassica rapa
BraA09t41086Z Brassica rapa
C07p60150 Brassica napus
C08p39900 Brassica napus
CANSAT25G2702 Cannabis sativa
CARHR242200 Cardamine hirsuta
CARHR293000 Cardamine hirsuta
Carub.0004s0257 Capsella rubella
Carub.0007s0633 Capsella rubella
Ca_08994_v3 Cicer arietinum L.
CBR_g34458 Chara braunii
Cc00_g07740 Coffea canephora
Cc07_g06170 Coffea canephora
CDE02G2369 Ceratophyllum demersum
Ciclev10025986m.g Citrus clementina
Ciclev10030127m.g Citrus clementina
CiPaw.01G015500 Carya illinoinensis
CiPaw.01G015800 Carya illinoinensis
ClCG02G012270 Citrullus lanatus
COL.COLO4_24563 Corchorus olitorius
COL.COLO4_32629 Corchorus olitorius
Cpa.g.sc200.27 Carica papaya
Cpa.g.sc55.119 Carica papaya
Cre13.g563150 Chlamydomonas reinhardtii
CsaV3_2G016420 Cucumis sativus L.
CSS0025726 Camellia sinensis var. sinensis
CSS0033708 Camellia sinensis var. sinensis
DCAR_010876 Daucus carota
Dinv30009 Davidia involucrata
Duzib132G1249 Durio zibethinus
Duzib147G0331 Durio zibethinus
ECA232G0198 Erigeron canadensis
ECA248G0229 Erigeron canadensis
EL10Ac6g15724 Beta vulgaris
EL10Ac9g22324 Beta vulgaris
Eucgr.H01690 Eucalyptus grandis
Eucgr.I01131 Eucalyptus grandis
Eucgr.I01132 Eucalyptus grandis
FAN19G0057 Fragaria x ananassa
FAN23G0103 Fragaria x ananassa
FAN23G0595 Fragaria x ananassa
FAN26G0096 Fragaria x ananassa
FAN28G0632 Fragaria x ananassa
FvH4_1g16330 Fragaria vesca
Glyma.01G188100 Glycine max
Glyma.11G054000 Glycine max
Gohir.A11G195100 Gossypium hirsutum
Gohir.A13G042200 Gossypium hirsutum
Gohir.D11G201200 Gossypium hirsutum
Gohir.D13G040700 Gossypium hirsutum
Gorai.007G215700 Gossypium raimondii
Gorai.013G045700 Gossypium raimondii
GSVIVG01022087001 Vitis vinifera
GSVIVG01031712001 Vitis vinifera
HanXRQChr15g0490761 Helianthus annuus
Haze_15373 Corylus avellana
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla
HPP92_024094 Vanilla planifolia
Hund00119 Selenicereus undatus
Hund13540 Selenicereus undatus
Lalb_Chr05g0213341 Lupinus albus
Lalb_Chr09g0323281 Lupinus albus
Lj2g0023089 Lotus japonicus
Lj7A73G20 Lonicera japonica
Lsat_1_v5_gn_4_165120 Lactuca sativa
Manes.13G121100 Manihot esculenta
Mapoly0032s0004 Marchantia polymorpha
MCO09G010 Micromonas commoda
MCO15G669 Micromonas commoda
MD02G1175800 Malus domestica
Medtr7g104350 Medicago truncatula
MELO3C020851.2 Cucumis melo
Migut.H00415 Erythranthe guttata
MSTRG.23735 Avicennia marina
Nitab4.5_0001221g0030 Nicotiana tabacum
Nitab4.5_0002765g0060 Nicotiana tabacum
Nn5g30355 Nelumbo nucifera
Oeu004436.1 Olea europaea
Oeu049898.1 Olea europaea
Os03g0109700 Oryza sativa ssp. japonica
Peaxi162Scf00549g00023 Petunia axillaris
PGR102G1991 Punica granatum
PGSC0003DMG400004028 Solanum tuberosum
Phvul.002G017100 Phaseolus vulgaris
Potri.001G304401 Populus trichocarpa
Potri.007G045900 Populus trichocarpa
Potri.009G099600 Populus trichocarpa
Pp3c13_18360 Physcomitrium patens
Pp3c4_13980 Physcomitrium patens
PRCOL_00001748 Prasinoderma coloniale
Prupe.6G231900 Prunus persica
Psat3g034240 Pisum sativum
PSO541G5706 Papaver somniferum
PSO675G7477 Papaver somniferum
QL06p040720 Quercus lobata
RcHm_v2.0_Chr2g0106191 Rosa chinensis
Rhsim10G0114700 Rhododendron simsii
Sabra07G0041100 Salix brachista
Sabra09G0075900 Salix brachista
Sc07g0000730 Simmondsia chinensis
Sed0013827 Sechium edule
SEGI_25477 Sequoiadendron giganteum
SEGI_26044 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35809 Striga asiatica
SGA_v2.0_scaffold34G13618 Striga asiatica
SGA_v2.0_scaffold60G20793 Striga asiatica
SMO367G0761 Selaginella moellendorffii
Solyc02g093170.4 Solanum lycopersicum
Sopen02g037740 Solanum pennellii
Sp4g02380 Schrenkiella parvula
Sp7g31800 Schrenkiella parvula
TAR381G1258 Trochodendron aralioides
TAR381G1342 Trochodendron aralioides
TAR381G1519 Trochodendron aralioides
THA.LOC104807263 Tarenaya hassleriana
THA.LOC104807591 Tarenaya hassleriana
Thecc.01G060000 Theobroma cacao
Thecc.02G103600 Theobroma cacao
Thhalv10000243m.g Eutrema salsugineum
Thhalv10025679m.g Eutrema salsugineum
TPR.G19549 Trifolium pratense
TWI09G0879 Tripterygium wilfordii
TWI31G1310 Tripterygium wilfordii
unitig_736.g22389 Utricularia gibba
vmacro05311 Vaccinium macrocarpon
VMungo1215G2858 Vigna mungo
Zm00001eb404220 Zea mays

User provided reference genes

Program Settings