Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p10240 Brassica napus
A08p32030 Brassica napus
Aa31LG1G790 Aethionema arabicum
Aa31sc1802G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1869 Anthoceros agrestis
Actinidia31896 Actinidia chinensis
AL1G26150 Arabidopsis lyrata
Aqoxy3G03371 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33WNW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9WQ92K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J8CRVY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6CIAB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PSIG0Y Arachis hypogaea
AT1G14270 Arabidopsis thaliana
ATR0307G023 Amborella trichopoda
ATR0307G135 Amborella trichopoda
ATR0564G518 Amborella trichopoda
Atru.chr11.1794 Acer truncatum
AUR62005771 Chenopodium quinoa
AUR62028786 Chenopodium quinoa
BcaB03g13106 Brassica carinata
BcaC05g25320 Brassica carinata
BcaC07g38729 Brassica carinata
BolC5t29957H Brassica oleracea
BolC8t49284H Brassica oleracea
BraA06t24207Z Brassica rapa
BraA08t35124Z Brassica rapa
C05p12020 Brassica napus
C08p16560 Brassica napus
CAN.G58.23 Capsicum annuum
CANSAT64G1881 Cannabis sativa
CARHR014690 Cardamine hirsuta
Carub.0001s1395 Capsella rubella
Ca_07115_v3 Cicer arietinum L.
Ca_27800_v3 Cicer arietinum L.
CBR_g52133 Chara braunii
Cc11_g13050 Coffea canephora
CDE04G3684 Ceratophyllum demersum
CDE09G0693 Ceratophyllum demersum
Cfa008987 Carpinus fangiana
Ciclev10032082m.g Citrus clementina
CiPaw.05G135800 Carya illinoinensis
ClCG05G024330 Citrullus lanatus
COL.COLO4_23008 Corchorus olitorius
Cpa.g.sc128.19 Carica papaya
Cre06.g310050 Chlamydomonas reinhardtii
CsaV3_5G032630 Cucumis sativus L.
CSS0046070 Camellia sinensis var. sinensis
DCAR_027410 Daucus carota
Dinv16641 Davidia involucrata
Duzib251G0705 Durio zibethinus
Duzib268G0391 Durio zibethinus
ECA233G2883 Erigeron canadensis
ECA247G1057 Erigeron canadensis
EL10Ac6g13196 Beta vulgaris
Eucgr.B03438 Eucalyptus grandis
FAN04G0237 Fragaria x ananassa
FAN07G2721 Fragaria x ananassa
FAN09G2429 Fragaria x ananassa
FAN09G3389 Fragaria x ananassa
FAN12G2979 Fragaria x ananassa
FAN12G3236 Fragaria x ananassa
FAN15G2962 Fragaria x ananassa
FAN17G1446 Fragaria x ananassa
FAN17G1826 Fragaria x ananassa
FAN21G2061 Fragaria x ananassa
FAN22G0666 Fragaria x ananassa
FAN23G2906 Fragaria x ananassa
FvH4_4g31430 Fragaria vesca
Glyma.08G300800 Glycine max
Glyma.18G119400 Glycine max
Gohir.A04G147800 Gossypium hirsutum
Gohir.D04G192100 Gossypium hirsutum
Gorai.012G187500 Gossypium raimondii
GSVIVG01019995001 Vitis vinifera
HanXRQChr12g0362151 Helianthus annuus
Haze_12017 Corylus avellana
Hma1.2p1_0795F.1_g218775 Hydrangea macrophylla
HPP92_027580 Vanilla planifolia
Hund05883 Selenicereus undatus
Hund25246 Selenicereus undatus
Lalb_Chr05g0220381 Lupinus albus
Lalb_Chr09g0329301 Lupinus albus
Lj2g0003230 Lotus japonicus
Lj2g0013736 Lotus japonicus
Lj4g0000065 Lotus japonicus
Lj6C788G13 Lonicera japonica
Lsat_1_v5_gn_8_53300 Lactuca sativa
Manes.05G100900 Manihot esculenta
Mapoly0033s0092 Marchantia polymorpha
MBI05_g08286_MAGBIO Magnolia biondii
MBI19_g09320_MAGBIO Magnolia biondii
MCO02G085 Micromonas commoda
MD13G1072600 Malus domestica
MD16G1073400 Malus domestica
Medtr8g467540 Medicago truncatula
MELO3C012090.2 Cucumis melo
Migut.C00406 Erythranthe guttata
Migut.L01298 Erythranthe guttata
Migut.L01299 Erythranthe guttata
Migut.L01300 Erythranthe guttata
MSTRG.7804 Avicennia marina
Nitab4.5_0001503g0160 Nicotiana tabacum
Nitab4.5_0011071g0010 Nicotiana tabacum
Nn1g09141 Nelumbo nucifera
Nn3g17224 Nelumbo nucifera
Nn4g23150 Nelumbo nucifera
Oeu055120.1 Olea europaea
Os08g0436600 Oryza sativa ssp. japonica
Os09g0413200 Oryza sativa ssp. japonica
Peaxi162Scf00541g00118 Petunia axillaris
PGR102G1495 Punica granatum
PGSC0003DMG400031270 Solanum tuberosum
Phvul.011G179800 Phaseolus vulgaris
Phvul.L004046 Phaseolus vulgaris
Potri.008G147600 Populus trichocarpa
Pp3c21_22610 Physcomitrium patens
PRCOL_00002500 Prasinoderma coloniale
Prupe.1G273600 Prunus persica
Psat4g134400 Pisum sativum
PSO063G0788 Papaver somniferum
PSO384G3479 Papaver somniferum
PSO767G0002 Papaver somniferum
PSO832G2587 Papaver somniferum
QL03p063033 Quercus lobata
QL03p063036 Quercus lobata
QL03p063041 Quercus lobata
QL03p064300 Quercus lobata
QL03p064307 Quercus lobata
RcHm_v2.0_Chr4g0413061 Rosa chinensis
RcHm_v2.0_Chr4g0439911 Rosa chinensis
Rhsim12G0063600 Rhododendron simsii
Sabra08G0112200 Salix brachista
SalBow2G3250 Salvia bowleyana
Sc14g0008260 Simmondsia chinensis
Sed0009585 Sechium edule
SEGI_11210 Sequoiadendron giganteum
SGA_v2.0_scaffold53G19364 Striga asiatica
SMO007G0001 Selaginella moellendorffii
SMO200G0049 Selaginella moellendorffii
Solyc05g007500.4 Solanum lycopersicum
Sopen05g003380 Solanum pennellii
Sp1g12620 Schrenkiella parvula
TAR371G0666 Trochodendron aralioides
TAR629G0643 Trochodendron aralioides
THA.LOC104801795 Tarenaya hassleriana
Thecc.02G347000 Theobroma cacao
Thhalv10008130m.g Eutrema salsugineum
TPR.G31818 Trifolium pratense
TPR.G8663 Trifolium pratense
unitig_747.g21177 Utricularia gibba
vmacro01257 Vaccinium macrocarpon
VMungo0251G2645 Vigna mungo
VMungo0331G0231 Vigna mungo
VMungo1127G0944 Vigna mungo
Zm00001eb041360 Zea mays
Zm00001eb312490 Zea mays

User provided reference genes

Program Settings