Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29810 Brassica napus
A03p68870 Brassica napus
A03p68880 Brassica napus
Aa31LG2G9580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1404 Anthoceros agrestis
Actinidia19942 Actinidia chinensis
Actinidia36578 Actinidia chinensis
Ah.06g188240 Amaranthus hybridus
AL2G15460 Arabidopsis lyrata
Aqoxy1G01535 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2GJ950 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5KT91U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TB7XPK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea
AT1G60995 Arabidopsis thaliana
ATR0763G087 Amborella trichopoda
Atru.chr6.619 Acer truncatum
Atru.chr6.621_Atru.chr6.622 Acer truncatum
AUR62000605 Chenopodium quinoa
AUR62006957 Chenopodium quinoa
BcaB04g20302 Brassica carinata
BcaC02g10600 Brassica carinata
BcaC06g31828 Brassica carinata
BcaC09g49343 Brassica carinata
BNapus_Darmor_BZH_scaffold_271p00020 Brassica napus
BNapus_Darmor_BZH_scaffold_271p00030 Brassica napus
BolC1t03731H Brassica oleracea
BolC4t24244H Brassica oleracea
BraA01t03109Z Brassica rapa
BraSC39t46176Z Brassica rapa
BraSC39t46178Z Brassica rapa
C01p37670 Brassica napus
C04p25650 Brassica napus
C05p50900 Brassica napus
CAN.G124.21 Capsicum annuum
CANSAT11G0894 Cannabis sativa
Carub.0002s0421 Capsella rubella
Ca_00068_v3 Cicer arietinum L.
CBR_g54224 Chara braunii
Cc09_g07620 Coffea canephora
CDE12G0153 Ceratophyllum demersum
CDE12G0158 Ceratophyllum demersum
CDE12G0207 Ceratophyllum demersum
CDE12G0675 Ceratophyllum demersum
CDE12G0722 Ceratophyllum demersum
Ciclev10000505m.g Citrus clementina
CiPaw.05G048700 Carya illinoinensis
ClCG05G009610 Citrullus lanatus
COL.COLO4_11782 Corchorus olitorius
CsaV3_3G019120 Cucumis sativus L.
CSS0010715 Camellia sinensis var. sinensis
CSS0031954 Camellia sinensis var. sinensis
DCAR_021303 Daucus carota
Dinv24776 Davidia involucrata
Duzib052G0332 Durio zibethinus
Duzib132G0532 Durio zibethinus
ECA233G0813 Erigeron canadensis
EL10Ac4g09724 Beta vulgaris
EL10Ac4g09779 Beta vulgaris
EL10Ac4g09783 Beta vulgaris
Eucgr.I02737 Eucalyptus grandis
FAN04G1948 Fragaria x ananassa
FAN08G0534 Fragaria x ananassa
FAN13G0955 Fragaria x ananassa
FAN18G0226 Fragaria x ananassa
FvH4_5g29191 Fragaria vesca
Glyma.08G187100 Glycine max
Glyma.15G045900 Glycine max
Gohir.A01G005001 Gossypium hirsutum
Gohir.A04G121200 Gossypium hirsutum
Gohir.D01G005100 Gossypium hirsutum
Gohir.D04G163900 Gossypium hirsutum
Gohir.D04G163933 Gossypium hirsutum
Gorai.002G006000 Gossypium raimondii
Gorai.012G151900 Gossypium raimondii
GSVIVG01022882001 Vitis vinifera
HanXRQChr15g0469061 Helianthus annuus
Haze_01724 Corylus avellana
Haze_01727 Corylus avellana
Haze_01729 Corylus avellana
Haze_01802 Corylus avellana
Haze_01804 Corylus avellana
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla
Hma1.2p1_0340F.1_g130025 Hydrangea macrophylla
Hma1.2p1_2041F.1_g312210 Hydrangea macrophylla
HPP92_017709 Vanilla planifolia
HPP92_017742 Vanilla planifolia
Hund07189 Selenicereus undatus
Hund21765 Selenicereus undatus
Lalb_Chr20g0123511 Lupinus albus
Lj4C822G11 Lonicera japonica
Lj6g0021650 Lotus japonicus
Lsat_1_v5_gn_5_71601 Lactuca sativa
Lsat_1_v5_gn_5_81581 Lactuca sativa
Manes.07G017650 Manihot esculenta
Manes.10G125900 Manihot esculenta
Mapoly0014s0041 Marchantia polymorpha
MBI01_g00654_MAGBIO Magnolia biondii
MBI01_g44452_MAGBIO Magnolia biondii
MD08G1235100 Malus domestica
MD15G1426300 Malus domestica
Medtr2g006880 Medicago truncatula
MELO3C019462.2 Cucumis melo
Migut.H02548 Erythranthe guttata
MSTRG.23232 Avicennia marina
Nitab4.5_0001785g0050 Nicotiana tabacum
Nitab4.5_0004809g0070 Nicotiana tabacum
Nn7g37934 Nelumbo nucifera
Oeu046366.1 Olea europaea
Os03g0659900 Oryza sativa ssp. japonica
Peaxi162Scf00577g00411 Petunia axillaris
PGR142G2697 Punica granatum
Phvul.006G215300 Phaseolus vulgaris
Potri.001G211700 Populus trichocarpa
Pp3c3_37820 Physcomitrium patens
PRCOL_00005332 Prasinoderma coloniale
Prupe.1G004500 Prunus persica
Psat1g221200 Pisum sativum
PSO541G2962 Papaver somniferum
PSO675G0104 Papaver somniferum
QL02p099200 Quercus lobata
RcHm_v2.0_Chr1g0332251 Rosa chinensis
RcHm_v2.0_Chr6g0266101 Rosa chinensis
RcHm_v2.0_Chr7g0230911 Rosa chinensis
Rhsim05G0203300 Rhododendron simsii
Sabra01G0163500 Salix brachista
SalBow8G0731 Salvia bowleyana
Sc09g0001940 Simmondsia chinensis
Sed0025782 Sechium edule
SEGI_15466 Sequoiadendron giganteum
SEGI_36483 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18853 Striga asiatica
SHI16673 Sapria himalayana
SHI16674 Sapria himalayana
SHI16685 Sapria himalayana
SMO116G0341 Selaginella moellendorffii
Solyc04g026280.2 Solanum lycopersicum
Sopen04g014430 Solanum pennellii
Sp2g03520 Schrenkiella parvula
TAR381G0517 Trochodendron aralioides
TAR625G0012 Trochodendron aralioides
TAR625G0944 Trochodendron aralioides
TAR625G1136 Trochodendron aralioides
THA.LOC104809619 Tarenaya hassleriana
Thecc.02G088200 Theobroma cacao
Thhalv10023347m.g Eutrema salsugineum
TPR.G2079 Trifolium pratense
TWI14G1252 Tripterygium wilfordii
TWI23G1121 Tripterygium wilfordii
TWI59G0201 Tripterygium wilfordii
unitig_0.g396 Utricularia gibba
vmacro12737 Vaccinium macrocarpon
VMungo0540G1095 Vigna mungo
Zm00001eb114350 Zea mays
Zm00001eb218090 Zea mays
Zm00001eb400250 Zea mays

User provided reference genes

Program Settings