Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00740 Brassica napus
Aa31LG5G18470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.991 Anthoceros agrestis
Actinidia23035 Actinidia chinensis
AL3G19300 Arabidopsis lyrata
Aqoxy4G01839 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CP937L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GWL1KB Arachis hypogaea
AT3G07930 Arabidopsis thaliana
ATR0068G005 Amborella trichopoda
Atru.chr9.65 Acer truncatum
AUR62017756 Chenopodium quinoa
AUR62032895 Chenopodium quinoa
BcaB04g16901 Brassica carinata
BcaC06g36658 Brassica carinata
BcaC08g44553 Brassica carinata
BolC6t37199H Brassica oleracea
BolC7t40577H Brassica oleracea
BraA07t27872Z Brassica rapa
C06p20180 Brassica napus
C07p01740 Brassica napus
CAN.G989.2 Capsicum annuum
CANSAT64G1383 Cannabis sativa
CANSAT64G2443 Cannabis sativa
CANSAT64G2852 Cannabis sativa
CARHR082660 Cardamine hirsuta
CARHR082670 Cardamine hirsuta
Carub.0003s0750 Capsella rubella
CBR_g51322 Chara braunii
Cc00_g06760 Coffea canephora
CDE02G2478 Ceratophyllum demersum
Ciclev10028470m.g Citrus clementina
CiPaw.15G093500 Carya illinoinensis
ClCG08G005050 Citrullus lanatus
COL.COLO4_05916 Corchorus olitorius
Cpa.g.sc15.68 Carica papaya
Cre05.g234250 Chlamydomonas reinhardtii
CsaV3_5G037160 Cucumis sativus L.
CSS0021628 Camellia sinensis var. sinensis
CSS0047186 Camellia sinensis var. sinensis
DCAR_016067 Daucus carota
Dinv01634 Davidia involucrata
Dinv08242 Davidia involucrata
Duzib235G0802 Durio zibethinus
ECA234G0087 Erigeron canadensis
ECA234G3785 Erigeron canadensis
EL10As7g23724 Beta vulgaris
Eucgr.B01580 Eucalyptus grandis
FAN19G3130 Fragaria x ananassa
FAN23G0569 Fragaria x ananassa
FAN26G1776 Fragaria x ananassa
FvH4_1g27870 Fragaria vesca
Glyma.13G009500 Glycine max
Glyma.13G009700 Glycine max
Gohir.A09G007300 Gossypium hirsutum
Gohir.D02G140450 Gossypium hirsutum
Gohir.D09G006600 Gossypium hirsutum
Gorai.005G156200 Gossypium raimondii
Gorai.006G008100 Gossypium raimondii
GSVIVG01003641001 Vitis vinifera
HanXRQChr12g0386021 Helianthus annuus
HanXRQChr14g0426811 Helianthus annuus
HanXRQChr16g0532761 Helianthus annuus
Haze_08020 Corylus avellana
Hma1.2p1_1077F.1_g254710 Hydrangea macrophylla
HPP92_007024 Vanilla planifolia
HPP92_007076 Vanilla planifolia
HPP92_015991 Vanilla planifolia
HPP92_015994 Vanilla planifolia
Hund25534 Selenicereus undatus
Lalb_Chr00c23g0406301 Lupinus albus
Lalb_Chr00c55g0413711 Lupinus albus
Lalb_Chr18g0049241 Lupinus albus
Lalb_Chr18g0049251 Lupinus albus
Lj2g0018447 Lotus japonicus
Lj2g0020909 Lotus japonicus
Lj2g0022882 Lotus japonicus
Lsat_1_v5_gn_3_140620 Lactuca sativa
Manes.18G143900 Manihot esculenta
Mapoly0049s0024 Marchantia polymorpha
MBI03_g13041_MAGBIO Magnolia biondii
MCO02G309 Micromonas commoda
MD00G1164900 Malus domestica
Medtr0037s0060 Medicago truncatula
Medtr0037s0250 Medicago truncatula
Medtr6g022590 Medicago truncatula
Medtr6g033105 Medicago truncatula
Medtr6g034730 Medicago truncatula
MELO3C022885.2 Cucumis melo
Migut.A01100 Erythranthe guttata
MSTRG.8994 Avicennia marina
Nitab4.5_0000843g0080 Nicotiana tabacum
Nitab4.5_0001799g0030 Nicotiana tabacum
Nitab4.5_0001799g0040 Nicotiana tabacum
Nitab4.5_0010824g0010 Nicotiana tabacum
Nn1g08914 Nelumbo nucifera
Nn5g27169 Nelumbo nucifera
Oeu061992.1 Olea europaea
Os09g0101100 Oryza sativa ssp. japonica
Peaxi162Scf00331g00311 Petunia axillaris
PGR031G3121 Punica granatum
PGSC0003DMG400017947 Solanum tuberosum
Phvul.L000201 Phaseolus vulgaris
Phvul.L000400 Phaseolus vulgaris
Potri.012G037700 Populus trichocarpa
Potri.014G187000 Populus trichocarpa
Potri.014G187300 Populus trichocarpa
Potri.014G187766 Populus trichocarpa
Potri.014G189400 Populus trichocarpa
Pp3c15_4380 Physcomitrium patens
PRCOL_00006916 Prasinoderma coloniale
Prupe.4G286600 Prunus persica
Psat1g014800 Pisum sativum
PSO384G4518 Papaver somniferum
PSO493G0020 Papaver somniferum
QL01p053168 Quercus lobata
QL01p053770 Quercus lobata
QL01p054228 Quercus lobata
QL02p058806 Quercus lobata
QL93p0107_0438 Quercus lobata
RcHm_v2.0_Chr3g0497491 Rosa chinensis
Rhsim11G0007200 Rhododendron simsii
Sabra12G0026100 Salix brachista
Sabra19G0060200 Salix brachista
Sabra19G0060300 Salix brachista
Sabra19G0060600 Salix brachista
Sabra19G0060700 Salix brachista
Sabra19G0060900 Salix brachista
Sabra19G0061000 Salix brachista
SabraUnG0000100 Salix brachista
SabraUnG0000200 Salix brachista
SalBow6G0181 Salvia bowleyana
SalBow6G5700 Salvia bowleyana
Sc22g0004560 Simmondsia chinensis
Sed0017627 Sechium edule
SEGI_27362 Sequoiadendron giganteum
SGA_v2.0_scaffold291G47333 Striga asiatica
SHI25031 Sapria himalayana
SMO334G0025 Selaginella moellendorffii
Solyc02g021100.3 Solanum lycopersicum
Sopen02g005400 Solanum pennellii
Sp3g06840 Schrenkiella parvula
TAR376G0371 Trochodendron aralioides
THA.LOC104805811 Tarenaya hassleriana
Thecc.04G056700 Theobroma cacao
Thhalv10020704m.g Eutrema salsugineum
TPR.G22982 Trifolium pratense
TPR.G9531 Trifolium pratense
TWI15G1026 Tripterygium wilfordii
TWI31G0951 Tripterygium wilfordii
unitig_22.g6364 Utricularia gibba
unitig_22.g6365 Utricularia gibba
vmacro04281 Vaccinium macrocarpon
vmacro22429 Vaccinium macrocarpon
VMungo0540G1024 Vigna mungo
VMungo0540G1855 Vigna mungo
Zm00001eb264110 Zea mays

User provided reference genes

Program Settings