Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07110 Brassica napus
A03p27890 Brassica napus
Aa31LG8G3140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2883 Anthoceros agrestis
Actinidia08272 Actinidia chinensis
Actinidia38079 Actinidia chinensis
Ah.08g212480 Amaranthus hybridus
AL6G41290 Arabidopsis lyrata
AL8G35940 Arabidopsis lyrata
Aqoxy5G01163 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RG91LC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UI0UDP Arachis hypogaea
AT4G07390 Arabidopsis thaliana
AT5G59470 Arabidopsis thaliana
ATR0706G173 Amborella trichopoda
Atru.chr13.748 Acer truncatum
AUR62002897 Chenopodium quinoa
AUR62035253 Chenopodium quinoa
BcaB01g02883 Brassica carinata
BcaB01g04583 Brassica carinata
BcaB05g22509 Brassica carinata
BcaC01g04787 Brassica carinata
BcaC01g04793 Brassica carinata
BcaC01g04795 Brassica carinata
BcaC01g06520 Brassica carinata
BcaC03g14011 Brassica carinata
BolC2t07347H Brassica oleracea
BolC3t13818H Brassica oleracea
BolC3t15687H Brassica oleracea
BraA02t05792Z Brassica rapa
BraA03t12001Z Brassica rapa
C02p12470 Brassica napus
C03p33670 Brassica napus
CAN.G1194.20 Capsicum annuum
CANSAT54G2334 Cannabis sativa
CARHR285840 Cardamine hirsuta
CARHR288440 Cardamine hirsuta
Carub.0006s2649 Capsella rubella
Carub.0008s2014 Capsella rubella
Ca_13257_v3 Cicer arietinum L.
CBR_g40794 Chara braunii
CBR_g8228 Chara braunii
Cc02_g27600 Coffea canephora
Cc10_g04860 Coffea canephora
CDE01G0812 Ceratophyllum demersum
Cfa018057 Carpinus fangiana
Ciclev10002344m.g Citrus clementina
CiPaw.15G052200 Carya illinoinensis
CiPaw.16G038000 Carya illinoinensis
ClCG08G016150 Citrullus lanatus
COL.COLO4_10117 Corchorus olitorius
Cpa.g.sc21.155 Carica papaya
Cre06.g261300 Chlamydomonas reinhardtii
Cre17.g722500 Chlamydomonas reinhardtii
CsaV3_2G026470 Cucumis sativus L.
CSS0035210 Camellia sinensis var. sinensis
Dinv35927 Davidia involucrata
Dinv39271 Davidia involucrata
Duzib093G0653 Durio zibethinus
ECA246G3296 Erigeron canadensis
ECA247G2514 Erigeron canadensis
EL10As7g23788 Beta vulgaris
Eucgr.F00183 Eucalyptus grandis
Eucgr.F02306 Eucalyptus grandis
FAN15G1438 Fragaria x ananassa
FAN20G0860 Fragaria x ananassa
FAN24G1748 Fragaria x ananassa
FAN27G2280 Fragaria x ananassa
FvH4_2g33730 Fragaria vesca
Glyma.14G085900 Glycine max
Glyma.17G238800 Glycine max
Gohir.A05G205600 Gossypium hirsutum
Gohir.D05G208900 Gossypium hirsutum
Gorai.009G215300 Gossypium raimondii
GSVIVG01009436001 Vitis vinifera
HanXRQChr10g0309661 Helianthus annuus
Haze_18072 Corylus avellana
Hma1.2p1_0360F.1_g135900 Hydrangea macrophylla
HPP92_003482 Vanilla planifolia
HPP92_014526 Vanilla planifolia
HPP92_026880 Vanilla planifolia
Hund04212 Selenicereus undatus
Lalb_Chr22g0354921 Lupinus albus
Lalb_Chr22g0354931 Lupinus albus
Lalb_Chr22g0354941 Lupinus albus
Lj4A64T29 Lonicera japonica
Lj5g0011390 Lotus japonicus
Lsat_1_v5_gn_1_22460 Lactuca sativa
Manes.05G177100 Manihot esculenta
Manes.18G041200 Manihot esculenta
Mapoly0040s0013 Marchantia polymorpha
MCO13G491 Micromonas commoda
MCO13G508 Micromonas commoda
MD08G1093700 Malus domestica
MD15G1077400 Malus domestica
Medtr1g018800 Medicago truncatula
MELO3C010837.2 Cucumis melo
Migut.N02728 Erythranthe guttata
MSTRG.25070 Avicennia marina
Nitab4.5_0004339g0040 Nicotiana tabacum
Nitab4.5_0006004g0010 Nicotiana tabacum
Nitab4.5_0006486g0040 Nicotiana tabacum
Nitab4.5_0010118g0060 Nicotiana tabacum
Nn5g30394 Nelumbo nucifera
Oeu037612.1 Olea europaea
Oeu045704.1 Olea europaea
Os07g0479200 Oryza sativa ssp. japonica
Peaxi162Scf00160g00024 Petunia axillaris
Peaxi162Scf00160g00034 Petunia axillaris
Peaxi162Scf00160g00035 Petunia axillaris
Peaxi162Scf01087g00125 Petunia axillaris
PGR031G3707 Punica granatum
PGR083G2827 Punica granatum
PGSC0003DMG400015434 Solanum tuberosum
Phvul.001G024600 Phaseolus vulgaris
Potri.014G023800 Populus trichocarpa
Pp3c10_370 Physcomitrium patens
Pp3c3_8350 Physcomitrium patens
Pp3c4_22670 Physcomitrium patens
PRCOL_00005305 Prasinoderma coloniale
Prupe.1G430800 Prunus persica
Psat6g015000 Pisum sativum
PSO170G3952 Papaver somniferum
PSO210G5934 Papaver somniferum
QL02p003978 Quercus lobata
QL07p047618 Quercus lobata
RcHm_v2.0_Chr0c32g0501551 Rosa chinensis
RcHm_v2.0_Chr1g0356881 Rosa chinensis
RcHm_v2.0_Chr6g0308821 Rosa chinensis
Rhsim07G0225500 Rhododendron simsii
Sabra14G0016200 Salix brachista
SalBow7G4009 Salvia bowleyana
Sc02g0007520 Simmondsia chinensis
Sed0017846 Sechium edule
SEGI_04928 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35065 Striga asiatica
SGA_v2.0_scaffold588G53062 Striga asiatica
SMO365G0080 Selaginella moellendorffii
Solyc12g088660.2 Solanum lycopersicum
Sopen12g030560 Solanum pennellii
Sp6g10610 Schrenkiella parvula
Sp6g21160 Schrenkiella parvula
TAR381G1093 Trochodendron aralioides
TAR628G0069 Trochodendron aralioides
TAR628G0193 Trochodendron aralioides
THA.LOC104824981 Tarenaya hassleriana
THA.LOC104825764 Tarenaya hassleriana
Thecc.08G001300 Theobroma cacao
Thhalv10015267m.g Eutrema salsugineum
Thhalv10028929m.g Eutrema salsugineum
TPR.G3787 Trifolium pratense
TWI36G0292 Tripterygium wilfordii
TWI56G1297 Tripterygium wilfordii
unitig_26.g9809 Utricularia gibba
vmacro21608 Vaccinium macrocarpon
VMungo0647G2267 Vigna mungo
Zm00001eb104960 Zea mays

User provided reference genes

Program Settings