Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18820 Brassica napus
A06p14210 Brassica napus
A07p39520 Brassica napus
Aa31LG4G3950 Aethionema arabicum
Aa31LG7G2890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3263 Anthoceros agrestis
Actinidia39845 Actinidia chinensis
Ah.14g089580 Amaranthus hybridus
AL1G30550 Arabidopsis lyrata
AL2G33430 Arabidopsis lyrata
Aqoxy3G00107 Aquilegia oxysepala
Aqoxy5G00264 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1QZS5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N5TGRV Arachis hypogaea
AT1G18180 Arabidopsis thaliana
AT1G73650 Arabidopsis thaliana
ATR1102G012 Amborella trichopoda
ATR1102G014 Amborella trichopoda
Atru.chr9.1749 Acer truncatum
AUR62014842 Chenopodium quinoa
AUR62017039 Chenopodium quinoa
AUR62044488 Chenopodium quinoa
BcaB03g15070 Brassica carinata
BcaB05g24805 Brassica carinata
BcaC05g25713 Brassica carinata
BcaC08g46785 Brassica carinata
BolC2t09166H Brassica oleracea
BolC5t30346H Brassica oleracea
BolC6t39815H Brassica oleracea
BraA02t06927Z Brassica rapa
BraA06t24552Z Brassica rapa
BraA07t31501Z Brassica rapa
C02p31240 Brassica napus
C05p16490 Brassica napus
CAN.G1129.48 Capsicum annuum
CAN.G423.25 Capsicum annuum
CARHR018750 Cardamine hirsuta
CARHR066710 Cardamine hirsuta
Carub.0001s1782 Capsella rubella
Carub.0002s2039 Capsella rubella
Ca_17202_v3 Cicer arietinum L.
CBR_g19480 Chara braunii
CBR_g30737 Chara braunii
Cc04_g06400 Coffea canephora
CDE04G0312 Ceratophyllum demersum
CDE06G1767 Ceratophyllum demersum
Cfa022515 Carpinus fangiana
Cfa026861 Carpinus fangiana
Ciclev10009007m.g Citrus clementina
CiPaw.15G140800 Carya illinoinensis
ClCG04G010690 Citrullus lanatus
COL.COLO4_16136 Corchorus olitorius
Cpa.g.sc3.409 Carica papaya
Cre09.g401701 Chlamydomonas reinhardtii
CsaV3_1G007090 Cucumis sativus L.
CSS0010888 Camellia sinensis var. sinensis
CSS0035576 Camellia sinensis var. sinensis
DCAR_010202 Daucus carota
Dinv18254 Davidia involucrata
Duzib068G0268 Durio zibethinus
Duzib205G0159 Durio zibethinus
ECA246G4140 Erigeron canadensis
EL10Ac8g20412 Beta vulgaris
FAN08G1718 Fragaria x ananassa
FAN13G2936 Fragaria x ananassa
Glyma.05G245000 Glycine max
Glyma.08G053000 Glycine max
Gohir.A03G093400 Gossypium hirsutum
Gohir.A11G003700 Gossypium hirsutum
Gohir.D02G122500 Gossypium hirsutum
Gohir.D11G003200 Gossypium hirsutum
Gorai.005G131600 Gossypium raimondii
Gorai.007G004200 Gossypium raimondii
GSVIVG01008416001 Vitis vinifera
HanXRQChr05g0142941 Helianthus annuus
HanXRQChr10g0301511 Helianthus annuus
HanXRQChr11g0337181 Helianthus annuus
HanXRQChr17g0539331 Helianthus annuus
Haze_18812 Corylus avellana
Haze_18815 Corylus avellana
Haze_18816 Corylus avellana
Haze_18821 Corylus avellana
HPP92_004161 Vanilla planifolia
HPP92_011083 Vanilla planifolia
Hund23775 Selenicereus undatus
Lalb_Chr05g0221771 Lupinus albus
Lalb_Chr16g0387091 Lupinus albus
Lj4g0026502 Lotus japonicus
Lj5C156T13 Lonicera japonica
Lj5C156T2 Lonicera japonica
Lsat_1_v5_gn_3_28120 Lactuca sativa
Lsat_1_v5_gn_4_113781 Lactuca sativa
Manes.06G007800 Manihot esculenta
Manes.14G170300 Manihot esculenta
Mapoly0024s0109 Marchantia polymorpha
Mapoly0088s0079 Marchantia polymorpha
Mapoly0098s0041 Marchantia polymorpha
MCO02G479 Micromonas commoda
MCO11G174 Micromonas commoda
MD06G1230700 Malus domestica
MD14G1235300 Malus domestica
Medtr8g107030 Medicago truncatula
MELO3C002127.2 Cucumis melo
Migut.D01560 Erythranthe guttata
Nitab4.5_0001456g0100 Nicotiana tabacum
Nitab4.5_0003221g0040 Nicotiana tabacum
Nitab4.5_0006894g0020 Nicotiana tabacum
Nitab4.5_0007852g0030 Nicotiana tabacum
Nn4g24193 Nelumbo nucifera
Oeu046173.1 Olea europaea
Oeu046174.1 Olea europaea
Os03g0708400 Oryza sativa ssp. japonica
Peaxi162Scf00207g00030 Petunia axillaris
Peaxi162Scf00683g00341 Petunia axillaris
PGR083G1819 Punica granatum
PGSC0003DMG401005669 Solanum tuberosum
PGSC0003DMG402005669 Solanum tuberosum
PGSC0003DMG402028784 Solanum tuberosum
Phvul.002G329000 Phaseolus vulgaris
Potri.015G039900 Populus trichocarpa
Pp3c10_10850 Physcomitrium patens
Pp3c13_4300 Physcomitrium patens
Pp3c14_25340 Physcomitrium patens
PRCOL_00001152 Prasinoderma coloniale
PRCOL_00003503 Prasinoderma coloniale
Prupe.5G232000 Prunus persica
Psat7g002040 Pisum sativum
PSO017G6915 Papaver somniferum
PSO478G0328 Papaver somniferum
QL10p028203 Quercus lobata
QL10p028318 Quercus lobata
RcHm_v2.0_Chr7g0178611 Rosa chinensis
Rhsim08G0076500 Rhododendron simsii
Sabra15G0057200 Salix brachista
SalBow1G0702 Salvia bowleyana
Sc04g0004880 Simmondsia chinensis
Sed0020868 Sechium edule
Sed0027092 Sechium edule
SEGI_28538 Sequoiadendron giganteum
SGA_v2.0_scaffold191G40443 Striga asiatica
Solyc03g118830.3 Solanum lycopersicum
Solyc06g068970.3 Solanum lycopersicum
Sopen03g037780 Solanum pennellii
Sopen06g026260 Solanum pennellii
Sp1g16160 Schrenkiella parvula
Sp5g28820 Schrenkiella parvula
TAR371G0148 Trochodendron aralioides
THA.LOC104813922 Tarenaya hassleriana
Thecc.03G053600 Theobroma cacao
Thhalv10008683m.g Eutrema salsugineum
Thhalv10018948m.g Eutrema salsugineum
TPR.G1423 Trifolium pratense
TWI60G0943 Tripterygium wilfordii
unitig_0.g807 Utricularia gibba
unitig_60.g25784 Utricularia gibba
vmacro18131 Vaccinium macrocarpon
Zm00001eb216550 Zea mays

User provided reference genes

Program Settings