Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27430 Brassica napus
Aa31LG6G16660 Aethionema arabicum
Aa31LG7G15710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2768 Anthoceros agrestis
Actinidia18044 Actinidia chinensis
Actinidia20523 Actinidia chinensis
Actinidia21473 Actinidia chinensis
Actinidia32030 Actinidia chinensis
Actinidia32031 Actinidia chinensis
Actinidia37338 Actinidia chinensis
Ah.01g008170 Amaranthus hybridus
Ah.01g023190 Amaranthus hybridus
AL4G10040 Arabidopsis lyrata
Aqoxy6G02026 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1RV92X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9NSEY Arachis hypogaea
AT2G20920 Arabidopsis thaliana
ATR0661G485 Amborella trichopoda
ATR0661G512 Amborella trichopoda
Atru.chr5.3387 Acer truncatum
Atru.chr5.3399 Acer truncatum
AUR62010016 Chenopodium quinoa
AUR62013006 Chenopodium quinoa
BcaB01g02957 Brassica carinata
BcaC01g04857 Brassica carinata
BcaC07g41182 Brassica carinata
BolC3t15633H Brassica oleracea
BraA03t11955Z Brassica rapa
C03p33070 Brassica napus
CAN.G588.96 Capsicum annuum
CANSAT25G1088 Cannabis sativa
CARHR111820 Cardamine hirsuta
Carub.0004s0001 Capsella rubella
Ca_03299_v3 Cicer arietinum L.
CBR_g40579 Chara braunii
Cc09_g10260 Coffea canephora
CDE05G0405 Ceratophyllum demersum
CDE05G2434 Ceratophyllum demersum
Cfa005282 Carpinus fangiana
Ciclev10028955m.g Citrus clementina
CiPaw.05G084700 Carya illinoinensis
CiPaw.06G120500 Carya illinoinensis
ClCG02G003930 Citrullus lanatus
ClCG02G012070 Citrullus lanatus
COL.COLO4_17371 Corchorus olitorius
Cpa.g.sc20.107 Carica papaya
Cre03.g190150 Chlamydomonas reinhardtii
CsaV3_2G016230 Cucumis sativus L.
CsaV3_7G001190 Cucumis sativus L.
CsaV3_7G001200 Cucumis sativus L.
CSS0014782 Camellia sinensis var. sinensis
CSS0049403 Camellia sinensis var. sinensis
DCAR_003183 Daucus carota
DCAR_003186 Daucus carota
Dinv01013 Davidia involucrata
Dinv09272 Davidia involucrata
Dinv14123 Davidia involucrata
Dinv41921 Davidia involucrata
Dinv44658 Davidia involucrata
Duzib052G0999 Durio zibethinus
Duzib132G0372 Durio zibethinus
Duzib248G1349 Durio zibethinus
ECA246G0196 Erigeron canadensis
ECA246G0918 Erigeron canadensis
EL10Ac9g21345 Beta vulgaris
Eucgr.G01787 Eucalyptus grandis
FAN15G1522 Fragaria x ananassa
FAN20G2203 Fragaria x ananassa
FAN24G0083 Fragaria x ananassa
FAN27G3200 Fragaria x ananassa
FvH4_2g15590 Fragaria vesca
Glyma.10G283100 Glycine max
Glyma.20G106600 Glycine max
Gohir.A01G170200 Gossypium hirsutum
Gohir.A12G036500 Gossypium hirsutum
Gohir.D01G161300 Gossypium hirsutum
Gohir.D12G036100 Gossypium hirsutum
Gorai.002G199900 Gossypium raimondii
Gorai.008G037300 Gossypium raimondii
GSVIVG01023991001 Vitis vinifera
HanXRQChr17g0544171 Helianthus annuus
Haze_02111 Corylus avellana
Hma1.2p1_0032F.1_g019265 Hydrangea macrophylla
Hma1.2p1_0163F.1_g072640 Hydrangea macrophylla
HPP92_001746 Vanilla planifolia
Hund06448 Selenicereus undatus
Lalb_Chr21g0307021 Lupinus albus
Lj5A177T58 Lonicera japonica
Lj5g0018549 Lotus japonicus
Lj9A397T37 Lonicera japonica
Lj9A400T59 Lonicera japonica
Lsat_1_v5_gn_3_47561 Lactuca sativa
Manes.04G071300 Manihot esculenta
Manes.11G097500 Manihot esculenta
Mapoly0158s0035 Marchantia polymorpha
MBI05_g00175_MAGBIO Magnolia biondii
MCO05G599 Micromonas commoda
MD05G1124500 Malus domestica
MD10G1127300 Malus domestica
Medtr1g112860 Medicago truncatula
MELO3C013335.2 Cucumis melo
MELO3C020831.2 Cucumis melo
Migut.B00062 Erythranthe guttata
Migut.N01330 Erythranthe guttata
MSTRG.19978 Avicennia marina
Nitab4.5_0003698g0030 Nicotiana tabacum
Nn5g30833 Nelumbo nucifera
Nn6g31925 Nelumbo nucifera
Oeu015555.1 Olea europaea
Oeu029649.1 Olea europaea
Os03g0137300 Oryza sativa ssp. japonica
Peaxi162Scf00362g00529 Petunia axillaris
PGR042G2401 Punica granatum
PGSC0003DMG400018041 Solanum tuberosum
Phvul.007G018100 Phaseolus vulgaris
Potri.004G177300 Populus trichocarpa
Potri.009G137600 Populus trichocarpa
Pp3c10_20920 Physcomitrium patens
Pp3c20_20480 Physcomitrium patens
PRCOL_00007096 Prasinoderma coloniale
Prupe.8G168200 Prunus persica
Psat6g232600 Pisum sativum
PSO170G0173 Papaver somniferum
PSO210G1566 Papaver somniferum
PSO541G4751 Papaver somniferum
PSO675G7052 Papaver somniferum
QL11p051507 Quercus lobata
RcHm_v2.0_Chr6g0278771 Rosa chinensis
Rhsim05G0053200 Rhododendron simsii
Rhsim11G0193300 Rhododendron simsii
Sabra04G0119200 Salix brachista
Sabra09G0106800 Salix brachista
Sc18g0006360 Simmondsia chinensis
Sed0005362 Sechium edule
Sed0025180 Sechium edule
Sed0028226 Sechium edule
SGA_v2.0_scaffold58G20350 Striga asiatica
SMO356G0675 Selaginella moellendorffii
Solyc01g111750.4 Solanum lycopersicum
Sopen01g053790 Solanum pennellii
Sp4g00110 Schrenkiella parvula
TAR376G0880 Trochodendron aralioides
TAR381G0316 Trochodendron aralioides
TAR381G1727 Trochodendron aralioides
THA.LOC104804086 Tarenaya hassleriana
THA.LOC104824757 Tarenaya hassleriana
Thecc.02G056100 Theobroma cacao
Thhalv10000275m.g Eutrema salsugineum
TPR.G2419 Trifolium pratense
TWI31G0086 Tripterygium wilfordii
TWI79G0300 Tripterygium wilfordii
unitig_744.g24280 Utricularia gibba
vmacro02287 Vaccinium macrocarpon
vmacro17321 Vaccinium macrocarpon
VMungo0720G0537 Vigna mungo
Zm00001eb003030 Zea mays
Zm00001eb402730 Zea mays

User provided reference genes

Program Settings