Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16750 Brassica napus
A09p09480 Brassica napus
Aa31LG1G15750 Aethionema arabicum
Actinidia03804 Actinidia chinensis
Actinidia16468 Actinidia chinensis
AL8G44120 Arabidopsis lyrata
Aqoxy5G01172 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H6KR5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZUJJ2F Arachis hypogaea
AT5G67220 Arabidopsis thaliana
ATR0001G042 Amborella trichopoda
Atru.chr3.268 Acer truncatum
AUR62003922 Chenopodium quinoa
AUR62038236 Chenopodium quinoa
BcaB02g09941 Brassica carinata
BcaB04g20070 Brassica carinata
BcaC04g23204 Brassica carinata
BcaC06g34804 Brassica carinata
BolC7t42968H Brassica oleracea
BolC9t54006H Brassica oleracea
BraA07t29400Z Brassica rapa
BraA09t36596Z Brassica rapa
C07p24480 Brassica napus
C09p11170 Brassica napus
CAN.G370.28 Capsicum annuum
CAN.G82.14 Capsicum annuum
CAN.G82.15 Capsicum annuum
CANSAT25G1160 Cannabis sativa
CARHR280410 Cardamine hirsuta
Carub.0008s2729 Capsella rubella
Ca_22131_v3 Cicer arietinum L.
CBR_g36684 Chara braunii
Cc07_g06290 Coffea canephora
Cc07_g06330 Coffea canephora
CDE02G1921 Ceratophyllum demersum
CDE02G4202 Ceratophyllum demersum
Cfa004047 Carpinus fangiana
Cfa023304 Carpinus fangiana
Ciclev10025630m.g Citrus clementina
CiPaw.01G014400 Carya illinoinensis
ClCG02G008020 Citrullus lanatus
COL.COLO4_11464 Corchorus olitorius
Cpa.g.sc55.107 Carica papaya
Cpa.g.sc55.108 Carica papaya
Cre12.g486900 Chlamydomonas reinhardtii
CsaV3_2G035640 Cucumis sativus L.
CSS0046694 Camellia sinensis var. sinensis
DCAR_010863 Daucus carota
DCAR_010864 Daucus carota
Dinv26852 Davidia involucrata
Dinv30022 Davidia involucrata
Duzib147G0002 Durio zibethinus
ECA232G1704 Erigeron canadensis
ECA246G0986 Erigeron canadensis
ECA246G1233 Erigeron canadensis
EL10Ac6g15705 Beta vulgaris
Eucgr.H02218 Eucalyptus grandis
Eucgr.L01089 Eucalyptus grandis
FAN19G2847 Fragaria x ananassa
FAN23G1966 Fragaria x ananassa
FAN26G1576 Fragaria x ananassa
FAN28G1894 Fragaria x ananassa
FAN28G2116 Fragaria x ananassa
FvH4_1g16470 Fragaria vesca
Glyma.05G096300 Glycine max
Glyma.17G169000 Glycine max
Gohir.A02G155700 Gossypium hirsutum
Gohir.D03G024900 Gossypium hirsutum
Gorai.003G026500 Gossypium raimondii
GSVIVG01022068001 Vitis vinifera
HanXRQChr11g0328291 Helianthus annuus
HanXRQChr11g0348441 Helianthus annuus
HanXRQChr15g0473611 Helianthus annuus
HanXRQChr15g0490881 Helianthus annuus
Haze_15364 Corylus avellana
Haze_26235 Corylus avellana
Haze_26560 Corylus avellana
Hma1.2p1_0017F.1_g011780 Hydrangea macrophylla
HPP92_012974 Vanilla planifolia
Hund13907 Selenicereus undatus
Lalb_Chr05g0226241 Lupinus albus
Lj4g0002857 Lotus japonicus
Lj7A74G30 Lonicera japonica
Lsat_1_v5_gn_3_90261 Lactuca sativa
Lsat_1_v5_gn_4_164460 Lactuca sativa
Manes.12G107300 Manihot esculenta
Manes.13G119720 Manihot esculenta
Mapoly0048s0005 Marchantia polymorpha
Mapoly0125s0018 Marchantia polymorpha
MCO16G071 Micromonas commoda
MD02G1177300 Malus domestica
MD02G1177400 Malus domestica
MD15G1287200 Malus domestica
Medtr4g094902 Medicago truncatula
Medtr4g094905 Medicago truncatula
MELO3C024784.2 Cucumis melo
Migut.L00177 Erythranthe guttata
MSTRG.3439 Avicennia marina
Nitab4.5_0000929g0040 Nicotiana tabacum
Nitab4.5_0003962g0040 Nicotiana tabacum
Nitab4.5_0007370g0010 Nicotiana tabacum
Nn1g04752 Nelumbo nucifera
Nn5g30384 Nelumbo nucifera
Os06g0712900 Oryza sativa ssp. japonica
Peaxi162Scf00365g00413 Petunia axillaris
Peaxi162Scf00549g00221 Petunia axillaris
PGR102G1926 Punica granatum
PGSC0003DMG400006483 Solanum tuberosum
PGSC0003DMG400024962 Solanum tuberosum
PGSC0003DMG400027934 Solanum tuberosum
PGSC0003DMG400039086 Solanum tuberosum
Phvul.003G241100 Phaseolus vulgaris
Potri.007G047300 Populus trichocarpa
Pp3c13_19950 Physcomitrium patens
Pp3c3_25920 Physcomitrium patens
Pp3c8_25410 Physcomitrium patens
Prupe.6G230700 Prunus persica
Psat4g085040 Pisum sativum
QL03p029185 Quercus lobata
QL04p014325 Quercus lobata
QL05p004270 Quercus lobata
QL06p040312 Quercus lobata
QL06p040440 Quercus lobata
QL10p012961 Quercus lobata
QL10p045366 Quercus lobata
QL11p046130 Quercus lobata
RcHm_v2.0_Chr2g0106351 Rosa chinensis
Rhsim08G0098400 Rhododendron simsii
Sabra07G0042200 Salix brachista
SalBow5G0679 Salvia bowleyana
Sc03g0001790 Simmondsia chinensis
Sed0006372 Sechium edule
Sed0019372 Sechium edule
SEGI_00124 Sequoiadendron giganteum
SEGI_29602 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05122 Striga asiatica
SHI29406 Sapria himalayana
SMO169G0138 Selaginella moellendorffii
Solyc02g093060.3 Solanum lycopersicum
Solyc03g044270.3 Solanum lycopersicum
Sopen02g037630 Solanum pennellii
Sopen03g008320 Solanum pennellii
Sopen05g023800 Solanum pennellii
Sp2g29450 Schrenkiella parvula
TAR376G0286 Trochodendron aralioides
TAR628G1022 Trochodendron aralioides
THA.LOC104819242 Tarenaya hassleriana
THA.LOC104821245 Tarenaya hassleriana
Thecc.01G061800 Theobroma cacao
Thhalv10004143m.g Eutrema salsugineum
TPR.G14594 Trifolium pratense
TPR.G20812 Trifolium pratense
TWI73G0624 Tripterygium wilfordii
unitig_0.g2631 Utricularia gibba
vmacro17967 Vaccinium macrocarpon
VMungo0251G3622 Vigna mungo
Zm00001eb227810 Zea mays

User provided reference genes

Program Settings