Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22150 Brassica napus
Aa31LG11G12420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4351 Anthoceros agrestis
Actinidia18517 Actinidia chinensis
Actinidia21669 Actinidia chinensis
Actinidia21906 Actinidia chinensis
Actinidia28193 Actinidia chinensis
Actinidia28194 Actinidia chinensis
Actinidia37297 Actinidia chinensis
Ah.12g052160 Amaranthus hybridus
AL6G28300 Arabidopsis lyrata
Aqoxy7G01739 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N7874Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5Q7UV Arachis hypogaea
AT5G17250 Arabidopsis thaliana
ATR0019G053 Amborella trichopoda
ATR0221G001 Amborella trichopoda
ATR1183G001 Amborella trichopoda
Atru.chr1.2080 Acer truncatum
AUR62010786 Chenopodium quinoa
AUR62019782 Chenopodium quinoa
BcaB05g24232 Brassica carinata
BcaB08g36795 Brassica carinata
BcaC04g18817 Brassica carinata
BolC9t58830H Brassica oleracea
BraA10t44274Z Brassica rapa
C09p59940 Brassica napus
CAN.G689.26 Capsicum annuum
CANSAT11G0088 Cannabis sativa
CARHR195960 Cardamine hirsuta
Carub.0006s1544 Capsella rubella
Ca_21358_v3 Cicer arietinum L.
CBR_g31522 Chara braunii
Cc03_g11340 Coffea canephora
CDE08G0728 Ceratophyllum demersum
CDE08G1048 Ceratophyllum demersum
Cfa003362 Carpinus fangiana
Cfa023376 Carpinus fangiana
Ciclev10018715m.g Citrus clementina
Ciclev10023873m.g Citrus clementina
CiPaw.04G170700 Carya illinoinensis
ClCG03G006320 Citrullus lanatus
COL.COLO4_38353 Corchorus olitorius
Cpa.g.sc80.32 Carica papaya
Cpa.g.sc80.33 Carica papaya
Cpa.g.sc80.35 Carica papaya
Cpa.g.sc80.37 Carica papaya
Cre02.g094050 Chlamydomonas reinhardtii
CsaV3_1G037410 Cucumis sativus L.
CSS0009392 Camellia sinensis var. sinensis
CSS0039221 Camellia sinensis var. sinensis
DCAR_009035 Daucus carota
Dinv21516 Davidia involucrata
Dinv43828 Davidia involucrata
Duzib187G1410 Durio zibethinus
ECA233G2342 Erigeron canadensis
ECA233G6037 Erigeron canadensis
EL10Ac5g12859 Beta vulgaris
Eucgr.B01002 Eucalyptus grandis
FAN07G0643 Fragaria x ananassa
FAN12G0960 Fragaria x ananassa
FAN12G2264 Fragaria x ananassa
FvH4_4g21830 Fragaria vesca
Glyma.13G116800 Glycine max
Glyma.17G043102 Glycine max
Gohir.A01G096700 Gossypium hirsutum
Gohir.A01G096750 Gossypium hirsutum
Gohir.D01G081000 Gossypium hirsutum
Gorai.002G105900 Gossypium raimondii
GSVIVG01034228001 Vitis vinifera
HanXRQChr17g0554761 Helianthus annuus
Haze_25597 Corylus avellana
Hma1.2p1_0482F.1_g162686 Hydrangea macrophylla
Hma1.2p1_0482F.1_g162689 Hydrangea macrophylla
Hma1.2p1_1944F.1_g308540 Hydrangea macrophylla
Hma1.2p1_1944F.1_g308560 Hydrangea macrophylla
HPP92_010565 Vanilla planifolia
HPP92_010566 Vanilla planifolia
HPP92_010574 Vanilla planifolia
HPP92_010575 Vanilla planifolia
Hund12270 Selenicereus undatus
Lalb_Chr12g0200461 Lupinus albus
Lj2g0001674 Lotus japonicus
Lj4g0015635 Lotus japonicus
Lj9C588T4 Lonicera japonica
Lsat_1_v5_gn_8_137620 Lactuca sativa
Manes.11G127500 Manihot esculenta
Mapoly0027s0070 Marchantia polymorpha
MBI03_g05192_MAGBIO Magnolia biondii
MBI05_g35190_MAGBIO Magnolia biondii
MBI12_g26628_MAGBIO Magnolia biondii
MBI14_g20897_MAGBIO Magnolia biondii
MCO01G549 Micromonas commoda
MD13G1136600 Malus domestica
MD16G1131900 Malus domestica
Medtr1g028490 Medicago truncatula
Medtr2g033130 Medicago truncatula
Medtr4g123557 Medicago truncatula
Medtr7g016710 Medicago truncatula
MELO3C002801.2 Cucumis melo
Migut.N03011 Erythranthe guttata
Migut.O00493 Erythranthe guttata
MSTRG.13783 Avicennia marina
Nitab4.5_0000848g0060 Nicotiana tabacum
Nitab4.5_0000848g0070 Nicotiana tabacum
Nitab4.5_0004432g0030 Nicotiana tabacum
Nn7g38087 Nelumbo nucifera
Oeu028192.1 Olea europaea
Os10g0170300 Oryza sativa ssp. japonica
Peaxi162Scf00341g00622 Petunia axillaris
Peaxi162Scf01313g00120 Petunia axillaris
Peaxi162Scf01313g00126 Petunia axillaris
PGR031G0128 Punica granatum
PGSC0003DMG400020700 Solanum tuberosum
Phvul.003G124900 Phaseolus vulgaris
Potri.003G059300 Populus trichocarpa
Pp3c19_7340 Physcomitrium patens
PRCOL_00002868 Prasinoderma coloniale
Prupe.1G208800 Prunus persica
Psat4g020520 Pisum sativum
PSO210G5682 Papaver somniferum
PSO761G0235 Papaver somniferum
QL02p088183 Quercus lobata
RcHm_v2.0_Chr4g0428061 Rosa chinensis
RcHm_v2.0_Chr5g0052551 Rosa chinensis
Rhsim05G0234800 Rhododendron simsii
Rhsim10G0128800 Rhododendron simsii
Sabra03G0033900 Salix brachista
SalBow2G2706 Salvia bowleyana
SalBow5G1401 Salvia bowleyana
SalBow6G4274 Salvia bowleyana
SalBow7G2764 Salvia bowleyana
Sc13g0008160 Simmondsia chinensis
Sed0000779 Sechium edule
Sed0016187 Sechium edule
SEGI_08197 Sequoiadendron giganteum
SEGI_14972 Sequoiadendron giganteum
SEGI_25015 Sequoiadendron giganteum
SEGI_34684 Sequoiadendron giganteum
SEGI_40055 Sequoiadendron giganteum
SHI11357 Sapria himalayana
SMO116G0486 Selaginella moellendorffii
Solyc07g014610.4 Solanum lycopersicum
Sopen07g005480 Solanum pennellii
Sp6g26980 Schrenkiella parvula
TAR636G2703 Trochodendron aralioides
THA.LOC104820866 Tarenaya hassleriana
Thecc.07G164200 Theobroma cacao
Thhalv10012592m.g Eutrema salsugineum
TPR.G12666 Trifolium pratense
TPR.G34395 Trifolium pratense
unitig_578.g16518 Utricularia gibba
unitig_578.g16519 Utricularia gibba
vmacro00088 Vaccinium macrocarpon
vmacro00089 Vaccinium macrocarpon
VMungo1215G1222 Vigna mungo
Zm00001eb127550 Zea mays

User provided reference genes

Program Settings