Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12620 Brassica napus
A07p04590 Brassica napus
Aa31LG8G13660 Aethionema arabicum
Actinidia28002 Actinidia chinensis
Ah.01g007160 Amaranthus hybridus
Ah.01g024550 Amaranthus hybridus
AL1G28790 Arabidopsis lyrata
AL3G52350 Arabidopsis lyrata
Aqoxy6G01519 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3UHBM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9P2D3 Arachis hypogaea
AT1G16630 Arabidopsis thaliana
AT2G16270 Arabidopsis thaliana
ATR0767G029 Amborella trichopoda
Atru.chr1.1899 Acer truncatum
Atru.chr5.2254 Acer truncatum
AUR62027031 Chenopodium quinoa
AUR62030875 Chenopodium quinoa
BcaC02g09043 Brassica carinata
BcaC05g25526 Brassica carinata
BcaC06g36138 Brassica carinata
BcaNung07335 Brassica carinata
BolC5t30206H Brassica oleracea
BolC7t41157H Brassica oleracea
BraA06t24423Z Brassica rapa
BraA07t28247Z Brassica rapa
C05p14910 Brassica napus
C07p07410 Brassica napus
CAN.G106.13 Capsicum annuum
CAN.G1627.4 Capsicum annuum
CAN.G1627.6 Capsicum annuum
CAN.G289.55 Capsicum annuum
CAN.G289.56 Capsicum annuum
CAN.G289.57 Capsicum annuum
CAN.G289.65 Capsicum annuum
CAN.G535.2 Capsicum annuum
CAN.G606.82 Capsicum annuum
CARHR017100 Cardamine hirsuta
CARHR106490 Cardamine hirsuta
Carub.0001s1637 Capsella rubella
Carub.0003s2996 Capsella rubella
Ca_21082_v3 Cicer arietinum L.
Cc02_g20190 Coffea canephora
Cfa004712 Carpinus fangiana
Ciclev10027822m.g Citrus clementina
CiPaw.06G163200 Carya illinoinensis
ClCG10G009980 Citrullus lanatus
COL.COLO4_32472 Corchorus olitorius
Cpa.g.sc106.25 Carica papaya
CsaV3_4G000030 Cucumis sativus L.
CSS0024832 Camellia sinensis var. sinensis
DCAR_021936 Daucus carota
Dinv09529 Davidia involucrata
Dinv16065 Davidia involucrata
Duzib132G0942 Durio zibethinus
Duzib132G1149 Durio zibethinus
ECA234G3304 Erigeron canadensis
EL10Ac4g09112 Beta vulgaris
Eucgr.B01419 Eucalyptus grandis
FAN09G3722 Fragaria x ananassa
FAN15G3289 Fragaria x ananassa
FAN20G2820 Fragaria x ananassa
FAN24G0611 Fragaria x ananassa
FAN27G1701 Fragaria x ananassa
FvH4_2g03070 Fragaria vesca
FvH4_6g23772 Fragaria vesca
Glyma.07G260600 Glycine max
Glyma.17G013400 Glycine max
Gohir.A03G180400 Gossypium hirsutum
Gohir.A13G048100 Gossypium hirsutum
Gohir.D02G203066 Gossypium hirsutum
Gohir.D13G046500 Gossypium hirsutum
Gorai.005G229300 Gossypium raimondii
Gorai.013G052200 Gossypium raimondii
GSVIVG01037037001 Vitis vinifera
GSVIVG01037038001 Vitis vinifera
HanXRQChr04g0101671 Helianthus annuus
Haze_10333 Corylus avellana
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla
HPP92_001855 Vanilla planifolia
Hund00415 Selenicereus undatus
Lalb_Chr15g0087631 Lupinus albus
Lalb_Chr18g0056371 Lupinus albus
Lj4g0013789 Lotus japonicus
Lj5A222T77 Lonicera japonica
Lsat_1_v5_gn_0_18160 Lactuca sativa
Lsat_1_v5_gn_5_111860 Lactuca sativa
Lsat_1_v5_gn_5_129280 Lactuca sativa
Manes.07G052400 Manihot esculenta
Manes.10G088200 Manihot esculenta
MBI16_g18399_MAGBIO Magnolia biondii
Medtr4g132160 Medicago truncatula
MELO3C018028.2 Cucumis melo
Migut.B00478 Erythranthe guttata
MSTRG.16666 Avicennia marina
Nitab4.5_0000575g0060 Nicotiana tabacum
Nitab4.5_0000772g0030 Nicotiana tabacum
Nitab4.5_0008331g0010 Nicotiana tabacum
Nitab4.5_0010657g0040 Nicotiana tabacum
Nn1g01808 Nelumbo nucifera
Nn5g30859 Nelumbo nucifera
Nn6g32057 Nelumbo nucifera
Oeu037295.1 Olea europaea
Peaxi162Scf00016g03244 Petunia axillaris
PGR142G3374 Punica granatum
PGSC0003DMG400001291 Solanum tuberosum
Phvul.003G078900 Phaseolus vulgaris
Potri.001G289100 Populus trichocarpa
Potri.009G084400 Populus trichocarpa
Prupe.8G151500 Prunus persica
Prupe.8G151700 Prunus persica
Psat2g146240 Pisum sativum
Psat4g006640 Pisum sativum
Psat4g082040 Pisum sativum
Psat5g077040 Pisum sativum
Psat5g192240 Pisum sativum
Psat6g108080 Pisum sativum
Psat6g212600 Pisum sativum
PSO210G3573 Papaver somniferum
PSO447G0365 Papaver somniferum
QL11p028919 Quercus lobata
QL93p0138_0014 Quercus lobata
RcHm_v2.0_Chr6g0247921 Rosa chinensis
Rhsim05G0093300 Rhododendron simsii
Sabra09G0065100 Salix brachista
Sabra16G0180900 Salix brachista
SalBow6G1764 Salvia bowleyana
SalBow6G5308 Salvia bowleyana
Sc08g0004290 Simmondsia chinensis
Sed0020853 Sechium edule
SEGI_15596 Sequoiadendron giganteum
SEGI_16491 Sequoiadendron giganteum
SGA_v2.0_scaffold32G12978 Striga asiatica
SGA_v2.0_scaffold519G52683 Striga asiatica
Solyc01g106750.2 Solanum lycopersicum
Solyc07g041350.1 Solanum lycopersicum
Sopen01g049070 Solanum pennellii
Sp1g14770 Schrenkiella parvula
Sp3g29460 Schrenkiella parvula
TAR381G0961 Trochodendron aralioides
TAR628G0237 Trochodendron aralioides
THA.LOC104819526 Tarenaya hassleriana
Thecc.02G121000 Theobroma cacao
Thhalv10006806m.g Eutrema salsugineum
Thhalv10022556m.g Eutrema salsugineum
TPR.G37037 Trifolium pratense
TWI14G1143 Tripterygium wilfordii
unitig_60.g25465 Utricularia gibba
unitig_744.g24202 Utricularia gibba
vmacro22260 Vaccinium macrocarpon
VMungo1215G2063 Vigna mungo
VMungo1215G3006 Vigna mungo

User provided reference genes

Program Settings