Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p19010 Brassica napus
A05p33520 Brassica napus
Aa31LG8G3110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2473 Anthoceros agrestis
Actinidia01796 Actinidia chinensis
Actinidia15828 Actinidia chinensis
Ah.01g021200 Amaranthus hybridus
AL1G56460 Arabidopsis lyrata
AL1G60680 Arabidopsis lyrata
AL3G28570 Arabidopsis lyrata
Aqoxy7G01825 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4HBL4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYD53Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LL8CI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZNJT9X Arachis hypogaea
AT1G52420 Arabidopsis thaliana
AT3G15940 Arabidopsis thaliana
ATR0037G016 Amborella trichopoda
Atru.chr1.3229 Acer truncatum
AUR62011619 Chenopodium quinoa
AUR62016434 Chenopodium quinoa
BcaB02g10992 Brassica carinata
BcaB06g25694 Brassica carinata
BcaC05g28923 Brassica carinata
BcaC08g43994 Brassica carinata
BolC5t33797H Brassica oleracea
BolC6t36577H Brassica oleracea
BraA05t20798Z Brassica rapa
BraA05t22173Z Brassica rapa
C05p50500 Brassica napus
C06p14000 Brassica napus
CAN.G438.55 Capsicum annuum
CAN.G473.61 Capsicum annuum
CANSAT56G0577 Cannabis sativa
CARHR042560 Cardamine hirsuta
CARHR091080 Cardamine hirsuta
CARHR260380 Cardamine hirsuta
Carub.0001s4141 Capsella rubella
Carub.0003s1568 Capsella rubella
Ca_01108_v3 Cicer arietinum L.
Ca_20401_v3 Cicer arietinum L.
Cc04_g03560 Coffea canephora
CDE02G4618 Ceratophyllum demersum
CDE04G1816 Ceratophyllum demersum
Cfa002052 Carpinus fangiana
Ciclev10024994m.g Citrus clementina
CiPaw.01G240400 Carya illinoinensis
ClCG07G012970 Citrullus lanatus
COL.COLO4_30343 Corchorus olitorius
Cpa.g.sc253.2 Carica papaya
CsaV3_3G026250 Cucumis sativus L.
CSS0033891 Camellia sinensis var. sinensis
DCAR_016226 Daucus carota
DCAR_021317 Daucus carota
Dinv30525 Davidia involucrata
ECA232G3019 Erigeron canadensis
EL10Ac9g21984 Beta vulgaris
Eucgr.F03009 Eucalyptus grandis
Eucgr.J03011 Eucalyptus grandis
FAN02G1252 Fragaria x ananassa
FAN05G4220 Fragaria x ananassa
FAN09G4341 Fragaria x ananassa
FAN14G2812 Fragaria x ananassa
FvH4_6g30940 Fragaria vesca
Glyma.07G034500 Glycine max
Glyma.08G207600 Glycine max
Glyma.13G360500 Glycine max
Glyma.15G013400 Glycine max
Gohir.A02G122400 Gossypium hirsutum
Gohir.A05G127500 Gossypium hirsutum
Gohir.A10G079400 Gossypium hirsutum
Gohir.D03G074100 Gossypium hirsutum
Gohir.D05G128400 Gossypium hirsutum
Gohir.D10G072100 Gossypium hirsutum
Gorai.002G058400 Gossypium raimondii
Gorai.009G132600 Gossypium raimondii
Gorai.011G077500 Gossypium raimondii
GSVIVG01017132001 Vitis vinifera
HanXRQChr01g0007451 Helianthus annuus
HanXRQChr01g0007461 Helianthus annuus
HanXRQChr09g0275371 Helianthus annuus
HanXRQChr11g0330281 Helianthus annuus
HanXRQChr16g0501021 Helianthus annuus
Haze_16452 Corylus avellana
HPP92_003643 Vanilla planifolia
Hund00604 Selenicereus undatus
Lalb_Chr24g0395771 Lupinus albus
Lj3g0017413 Lotus japonicus
Lj3g0022997 Lotus japonicus
Lj5A62T32 Lonicera japonica
Lsat_1_v5_gn_4_103420 Lactuca sativa
Manes.11G052170 Manihot esculenta
Mapoly0005s0028 Marchantia polymorpha
MD00G1200900 Malus domestica
MD13G1157300 Malus domestica
MD17G1197500 Malus domestica
Medtr2g102283 Medicago truncatula
Medtr4g011910 Medicago truncatula
Medtr4g069840 Medicago truncatula
MELO3C012953.2 Cucumis melo
Migut.G01125 Erythranthe guttata
Migut.G01234 Erythranthe guttata
Migut.G01235 Erythranthe guttata
Migut.I00850 Erythranthe guttata
Migut.K01028 Erythranthe guttata
Nitab4.5_0003885g0070 Nicotiana tabacum
Nitab4.5_0006801g0030 Nicotiana tabacum
Nn2g11815 Nelumbo nucifera
Nn8g39259 Nelumbo nucifera
Oeu033491.1 Olea europaea
Oeu063961.1 Olea europaea
Oeu063965.1 Olea europaea
Peaxi162Scf00015g00330 Petunia axillaris
PGR102G1468 Punica granatum
PGR102G1515 Punica granatum
PGSC0003DMG401002640 Solanum tuberosum
Phvul.005G172300 Phaseolus vulgaris
Phvul.010G151400 Phaseolus vulgaris
Potri.001G179000 Populus trichocarpa
Prupe.3G073400 Prunus persica
Psat1g004520 Pisum sativum
Psat7g253120 Pisum sativum
PSO063G7267 Papaver somniferum
PSO782G5143 Papaver somniferum
QL05p025307 Quercus lobata
RcHm_v2.0_Chr2g0137571 Rosa chinensis
Rhsim08G0219000 Rhododendron simsii
Rhsim08G0219100 Rhododendron simsii
Rhsim08G0219200 Rhododendron simsii
Rhsim08G0219300 Rhododendron simsii
Rhsim08G0219400 Rhododendron simsii
Rhsim08G0219600 Rhododendron simsii
Rhsim08G0219700 Rhododendron simsii
Sabra01G0147900 Salix brachista
SalBow2G3381 Salvia bowleyana
Sc10g0007450 Simmondsia chinensis
Sed0021846 Sechium edule
SEGI_04286 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02627 Striga asiatica
SMO147G0020 Selaginella moellendorffii
Solyc03g120310.3 Solanum lycopersicum
Sopen03g039200 Solanum pennellii
Sp1g39040 Schrenkiella parvula
Sp3g14260 Schrenkiella parvula
TAR624G0215 Trochodendron aralioides
THA.LOC104818012 Tarenaya hassleriana
Thecc.06G083900 Theobroma cacao
Thhalv10011288m.g Eutrema salsugineum
Thhalv10020188m.g Eutrema salsugineum
TPR.G22966 Trifolium pratense
TPR.G24156 Trifolium pratense
TWI18G0348 Tripterygium wilfordii
unitig_21.g20514 Utricularia gibba
vmacro18926 Vaccinium macrocarpon
vmacro18927 Vaccinium macrocarpon
vmacro18928 Vaccinium macrocarpon
VMungo0331G0981 Vigna mungo

User provided reference genes

Program Settings