Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG9G240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2453 Anthoceros agrestis
Actinidia15203 Actinidia chinensis
Actinidia19830 Actinidia chinensis
Actinidia22205 Actinidia chinensis
Ah.07g197920 Amaranthus hybridus
AL7G47270 Arabidopsis lyrata
Aqoxy7G00024 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6R22RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CHU5UJ Arachis hypogaea
AT5G41950 Arabidopsis thaliana
ATR0620G132 Amborella trichopoda
Atru.chr9.1891 Acer truncatum
AUR62007050 Chenopodium quinoa
AUR62019914 Chenopodium quinoa
BcaB06g27683 Brassica carinata
BcaC02g08901 Brassica carinata
BcaC08g44571 Brassica carinata
BolC4t26520H Brassica oleracea
BolC6t37215H Brassica oleracea
C06p20370 Brassica napus
CAN.G567.85 Capsicum annuum
CANSAT21G1410 Cannabis sativa
CARHR212610 Cardamine hirsuta
Carub.0007s3343 Capsella rubella
Ca_09948_v3 Cicer arietinum L.
CBR_g24226 Chara braunii
Cc08_g16710 Coffea canephora
CDE09G0653 Ceratophyllum demersum
Cfa011928 Carpinus fangiana
Ciclev10019829m.g Citrus clementina
CiPaw.11G112800 Carya illinoinensis
CiPaw.12G077700 Carya illinoinensis
ClCG10G000820 Citrullus lanatus
COL.COLO4_10792 Corchorus olitorius
Cpa.g.sc175.24 Carica papaya
Cre09.g387550 Chlamydomonas reinhardtii
CsaV3_3G000890 Cucumis sativus L.
CSS0032200 Camellia sinensis var. sinensis
DCAR_006543 Daucus carota
Dinv08405 Davidia involucrata
Dinv12926 Davidia involucrata
Dinv16877 Davidia involucrata
Duzib068G0531 Durio zibethinus
Duzib205G1161 Durio zibethinus
ECA240G2146 Erigeron canadensis
ECA246G3914 Erigeron canadensis
EL10Ac5g12433 Beta vulgaris
Eucgr.D01683 Eucalyptus grandis
FAN04G2529 Fragaria x ananassa
FAN08G2217 Fragaria x ananassa
FAN13G2046 Fragaria x ananassa
FAN18G3535 Fragaria x ananassa
FvH4_5g10960 Fragaria vesca
Glyma.10G172800 Glycine max
Glyma.20G217500 Glycine max
Gohir.A02G098100 Gossypium hirsutum
Gohir.A06G102600 Gossypium hirsutum
Gohir.A08G110100 Gossypium hirsutum
Gohir.A09G188600 Gossypium hirsutum
Gohir.D01G085875 Gossypium hirsutum
Gohir.D03G085500 Gossypium hirsutum
Gohir.D03G136750 Gossypium hirsutum
Gohir.D04G089675 Gossypium hirsutum
Gohir.D05G097100 Gossypium hirsutum
Gohir.D07G097001 Gossypium hirsutum
Gohir.D08G109908 Gossypium hirsutum
Gohir.D08G123000 Gossypium hirsutum
Gohir.D09G183500 Gossypium hirsutum
Gorai.001G213600 Gossypium raimondii
Gorai.002G111300 Gossypium raimondii
Gorai.003G053400 Gossypium raimondii
Gorai.003G076800 Gossypium raimondii
Gorai.004G129800 Gossypium raimondii
Gorai.006G205900 Gossypium raimondii
GSVIVG01019647001 Vitis vinifera
HanXRQChr03g0086131 Helianthus annuus
HanXRQChr05g0133491 Helianthus annuus
HanXRQChr06g0166801 Helianthus annuus
HanXRQChr17g0534721 Helianthus annuus
Haze_09171 Corylus avellana
Hma1.2p1_0456F.1_g156590 Hydrangea macrophylla
HPP92_007396 Vanilla planifolia
Hund11352 Selenicereus undatus
Lalb_Chr02g0149581 Lupinus albus
Lalb_Chr21g0311621 Lupinus albus
Lj2A157G52 Lonicera japonica
Lj5g0020025 Lotus japonicus
Lj8A201G75 Lonicera japonica
Lsat_1_v5_gn_1_84960 Lactuca sativa
Lsat_1_v5_gn_3_125120 Lactuca sativa
Lsat_1_v5_gn_3_14141 Lactuca sativa
Lsat_1_v5_gn_6_82240 Lactuca sativa
Manes.01G051700 Manihot esculenta
Manes.02G003100 Manihot esculenta
Mapoly0068s0096 Marchantia polymorpha
MBI12_g13717_MAGBIO Magnolia biondii
MCO14G177 Micromonas commoda
MD06G1118100 Malus domestica
MD14G1126200 Malus domestica
Medtr1g077850 Medicago truncatula
MELO3C013775.2 Cucumis melo
Migut.E00624 Erythranthe guttata
Migut.E00632 Erythranthe guttata
MSTRG.13716 Avicennia marina
Nitab4.5_0004251g0030 Nicotiana tabacum
Nitab4.5_0007063g0040 Nicotiana tabacum
Nn1g00375 Nelumbo nucifera
Nn2g10258 Nelumbo nucifera
Nn3g16272 Nelumbo nucifera
Oeu013386.1 Olea europaea
Oeu041376.1 Olea europaea
Oeu041377.1 Olea europaea
Os03g0113800 Oryza sativa ssp. japonica
Os10g0518300 Oryza sativa ssp. japonica
Peaxi162Scf00074g00026 Petunia axillaris
PGR031G2083 Punica granatum
Phvul.L005101 Phaseolus vulgaris
Potri.003G146200 Populus trichocarpa
Pp3c1_15130 Physcomitrium patens
Pp3c2_21950 Physcomitrium patens
Prupe.5G129200 Prunus persica
Psat6g053240 Pisum sativum
PSO063G4918 Papaver somniferum
PSO782G3970 Papaver somniferum
QL02p028181 Quercus lobata
QL02p028195 Quercus lobata
RcHm_v2.0_Chr7g0186861 Rosa chinensis
Rhsim02G0251800 Rhododendron simsii
Sabra03G0106400 Salix brachista
SalBow1G2042 Salvia bowleyana
Sc22g0004710 Simmondsia chinensis
Sed0004618 Sechium edule
SEGI_10381 Sequoiadendron giganteum
SEGI_12617 Sequoiadendron giganteum
SEGI_26605 Sequoiadendron giganteum
SGA_v2.0_scaffold127G33962 Striga asiatica
SMO134G0154 Selaginella moellendorffii
Solyc08g083070.3 Solanum lycopersicum
Sopen08g031290 Solanum pennellii
Sp7g00180 Schrenkiella parvula
TAR375G0778 Trochodendron aralioides
TAR629G1871 Trochodendron aralioides
THA.LOC104823625 Tarenaya hassleriana
Thecc.03G221500 Theobroma cacao
Thhalv10027708m.g Eutrema salsugineum
TPR.G34807 Trifolium pratense
TPR.G39353 Trifolium pratense
TWI15G0843 Tripterygium wilfordii
TWI15G1120 Tripterygium wilfordii
TWI81G0490 Tripterygium wilfordii
unitig_62.g23647 Utricularia gibba
vmacro11504 Vaccinium macrocarpon
VMungo0720G2137 Vigna mungo
VMungo1383G2282 Vigna mungo
Zm00001eb043430 Zea mays
Zm00001eb220090 Zea mays

User provided reference genes

Program Settings