Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39240 Brassica napus
A09p05980 Brassica napus
Aa31LG1G21020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3331 Anthoceros agrestis
Ah.10g034040 Amaranthus hybridus
AL6G38190 Arabidopsis lyrata
Aqoxy2G03981 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I8I12Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7L0BR Arachis hypogaea
AT5G26180 Arabidopsis thaliana
ATR0051G016 Amborella trichopoda
Atru.chr7.1889 Acer truncatum
Atru.chr7.1890 Acer truncatum
Atru.chr7.1917 Acer truncatum
Atru.chr7.1918 Acer truncatum
AUR62009103 Chenopodium quinoa
AUR62020569 Chenopodium quinoa
BcaB04g19746 Brassica carinata
BcaB04g19747 Brassica carinata
BcaB07g29949 Brassica carinata
BcaB07g29950 Brassica carinata
BcaB07g29951 Brassica carinata
BcaC03g17845 Brassica carinata
BcaC04g23605 Brassica carinata
BolC2t11942H Brassica oleracea
BolC9t53577H Brassica oleracea
BraA02t08889Z Brassica rapa
BraA09t36240Z Brassica rapa
C02p58840 Brassica napus
C09p06540 Brassica napus
CAN.G42.5 Capsicum annuum
CANSAT21G1762 Cannabis sativa
CARHR187480 Cardamine hirsuta
Carub.0006s2397 Capsella rubella
Ca_15845_v3 Cicer arietinum L.
CBR_g41718 Chara braunii
CBR_g41719 Chara braunii
Cc08_g11070 Coffea canephora
CDE08G0262 Ceratophyllum demersum
Cfa017997 Carpinus fangiana
Cfa023298 Carpinus fangiana
Ciclev10010180m.g Citrus clementina
CiPaw.16G067600 Carya illinoinensis
ClCG05G018120 Citrullus lanatus
COL.COLO4_21108 Corchorus olitorius
Cpa.g.sc126.50 Carica papaya
CsaV3_4G035890 Cucumis sativus L.
CSS0016381 Camellia sinensis var. sinensis
DCAR_003934 Daucus carota
DCAR_007741 Daucus carota
Dinv11839 Davidia involucrata
Dinv12464 Davidia involucrata
Dinv12465 Davidia involucrata
Duzib168G0020 Durio zibethinus
ECA234G1492 Erigeron canadensis
EL10Ac2g03807 Beta vulgaris
Eucgr.C00676 Eucalyptus grandis
FAN02G1466 Fragaria x ananassa
FAN02G1541 Fragaria x ananassa
FAN02G3252 Fragaria x ananassa
FAN04G3021 Fragaria x ananassa
FAN15G0359 Fragaria x ananassa
FAN15G0601 Fragaria x ananassa
FAN17G2977 Fragaria x ananassa
FAN20G0813 Fragaria x ananassa
FAN24G3059 Fragaria x ananassa
FAN27G1750 Fragaria x ananassa
FvH4_2g31380 Fragaria vesca
Glyma.04G054300 Glycine max
Glyma.06G054600 Glycine max
Gohir.A05G040100 Gossypium hirsutum
Gohir.D05G041600 Gossypium hirsutum
Gorai.009G042200 Gossypium raimondii
GSVIVG01035427001 Vitis vinifera
HanXRQChr10g0309801 Helianthus annuus
Haze_18137 Corylus avellana
Hma1.2p1_0196F.1_g084950 Hydrangea macrophylla
Hma1.2p1_0196F.1_g084970 Hydrangea macrophylla
Hma1.2p1_0231F.1_g097600 Hydrangea macrophylla
HPP92_023988 Vanilla planifolia
HPP92_023989 Vanilla planifolia
HPP92_023996 Vanilla planifolia
Hund19431 Selenicereus undatus
Lalb_Chr11g0063251 Lupinus albus
Lj1g0023758 Lotus japonicus
Lj8A491G32 Lonicera japonica
Lj8A491T35 Lonicera japonica
Lj8A495T42 Lonicera japonica
Lj8A495T43 Lonicera japonica
Lsat_1_v5_gn_1_100981 Lactuca sativa
Lsat_1_v5_gn_1_16680 Lactuca sativa
Lsat_1_v5_gn_1_46680 Lactuca sativa
Lsat_1_v5_gn_2_21720 Lactuca sativa
Lsat_1_v5_gn_4_64761 Lactuca sativa
Lsat_1_v5_gn_4_98001 Lactuca sativa
Lsat_1_v5_gn_5_184340 Lactuca sativa
Lsat_1_v5_gn_5_78680 Lactuca sativa
Lsat_1_v5_gn_5_92240 Lactuca sativa
Lsat_1_v5_gn_5_92260 Lactuca sativa
Lsat_1_v5_gn_6_36380 Lactuca sativa
Manes.16G083500 Manihot esculenta
Mapoly0057s0032 Marchantia polymorpha
MBI05_g23629_MAGBIO Magnolia biondii
MCO11G750 Micromonas commoda
MD08G1067900 Malus domestica
MD15G1053900 Malus domestica
Medtr3g104760 Medicago truncatula
MELO3C016896.2 Cucumis melo
MELO3C028645.2 Cucumis melo
MELO3C028647.2 Cucumis melo
Migut.A00101 Erythranthe guttata
MSTRG.25978 Avicennia marina
Nitab4.5_0000286g0110 Nicotiana tabacum
Nitab4.5_0009148g0020 Nicotiana tabacum
Nn6g35569 Nelumbo nucifera
Oeu018033.1 Olea europaea
Os02g0217800 Oryza sativa ssp. japonica
Peaxi162Scf01253g00025 Petunia axillaris
PGR031G3863 Punica granatum
PGSC0003DMG400008208 Solanum tuberosum
Phvul.009G080100 Phaseolus vulgaris
Potri.006G224000 Populus trichocarpa
Pp3c1_12750 Physcomitrium patens
PRCOL_00003600 Prasinoderma coloniale
Prupe.1G407400 Prunus persica
Psat5g035360 Pisum sativum
PSO210G1875 Papaver somniferum
PSO210G2988 Papaver somniferum
QL02p000390 Quercus lobata
RcHm_v2.0_Chr2g0162631 Rosa chinensis
RcHm_v2.0_Chr6g0311441 Rosa chinensis
Rhsim05G0135500 Rhododendron simsii
Sabra06G0173000 Salix brachista
SalBow4G1696 Salvia bowleyana
Sc09g0009980 Simmondsia chinensis
Sc09g0009990 Simmondsia chinensis
Sed0025089 Sechium edule
SEGI_04699 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09183 Striga asiatica
SHI18706 Sapria himalayana
SHI18707 Sapria himalayana
SMO169G0045 Selaginella moellendorffii
Solyc08g062433.1 Solanum lycopersicum
Solyc08g062560.4 Solanum lycopersicum
Sopen08g017950 Solanum pennellii
Sopen08g017990 Solanum pennellii
Sp2g21560 Schrenkiella parvula
TAR624G1267 Trochodendron aralioides
THA.LOC104811228 Tarenaya hassleriana
Thecc.09G059300 Theobroma cacao
Thhalv10004076m.g Eutrema salsugineum
TPR.G3533 Trifolium pratense
TWI32G0723 Tripterygium wilfordii
unitig_88.g27672 Utricularia gibba
vmacro19714 Vaccinium macrocarpon
VMungo1309G3014 Vigna mungo
Zm00001eb240170 Zea mays

User provided reference genes

Program Settings