Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02190 Brassica napus
Aa31LG5G2470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3373 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3381 Anthoceros agrestis
Actinidia08500 Actinidia chinensis
Actinidia23481 Actinidia chinensis
Actinidia40184 Actinidia chinensis
Ah.02g126660 Amaranthus hybridus
Ah.02g126670 Amaranthus hybridus
AL1G12600 Arabidopsis lyrata
AL6G50160 Arabidopsis lyrata
Aqoxy2G03369 Aquilegia oxysepala
AT1G03130 Arabidopsis thaliana
AT4G02770 Arabidopsis thaliana
ATR0332G058 Amborella trichopoda
Atru.chr5.1457 Acer truncatum
AUR62003053 Chenopodium quinoa
AUR62007866 Chenopodium quinoa
BcaB01g02006 Brassica carinata
BcaC04g24013 Brassica carinata
BolC9t53156H Brassica oleracea
BraA09t35867Z Brassica rapa
C09p02270 Brassica napus
CAN.G873.3 Capsicum annuum
CAN.G907.14 Capsicum annuum
CANSAT78G0495 Cannabis sativa
CARHR002480 Cardamine hirsuta
CARHR251140 Cardamine hirsuta
Carub.0001s0227 Capsella rubella
Carub.0006s3429 Capsella rubella
Ca_24392_v3 Cicer arietinum L.
CBR_g29404 Chara braunii
Cc03_g03590 Coffea canephora
CDE05G2563 Ceratophyllum demersum
CDE05G3644 Ceratophyllum demersum
Cfa015626 Carpinus fangiana
Ciclev10005892m.g Citrus clementina
Ciclev10022248m.g Citrus clementina
CiPaw.01G164700 Carya illinoinensis
COL.COLO4_08529 Corchorus olitorius
COL.COLO4_09078 Corchorus olitorius
Cre05.g238332 Chlamydomonas reinhardtii
CsaV3_3G013420 Cucumis sativus L.
CSS0012673 Camellia sinensis var. sinensis
CSS0028157 Camellia sinensis var. sinensis
DCAR_030627 Daucus carota
Dinv13981 Davidia involucrata
Dinv44516 Davidia involucrata
Duzib138G0113 Durio zibethinus
Duzib151G0623 Durio zibethinus
Duzib211G0345 Durio zibethinus
ECA246G4948 Erigeron canadensis
EL10Ac6g14667 Beta vulgaris
Eucgr.B01088 Eucalyptus grandis
Eucgr.H03534 Eucalyptus grandis
FAN07G2783 Fragaria x ananassa
FAN12G0806 Fragaria x ananassa
FAN17G0373 Fragaria x ananassa
FAN22G0449 Fragaria x ananassa
FvH4_4g15260 Fragaria vesca
Glyma.10G249000 Glycine max
Glyma.20G144700 Glycine max
Gohir.1Z049558 Gossypium hirsutum
Gohir.A02G031301 Gossypium hirsutum
Gohir.A08G066200 Gossypium hirsutum
Gohir.A12G004600 Gossypium hirsutum
Gohir.D02G038100 Gossypium hirsutum
Gohir.D08G074900 Gossypium hirsutum
Gohir.D12G004300 Gossypium hirsutum
Gorai.004G079200 Gossypium raimondii
Gorai.005G042000 Gossypium raimondii
Gorai.008G004100 Gossypium raimondii
GSVIVG01001159001 Vitis vinifera
GSVIVG01017944001 Vitis vinifera
HanXRQChr03g0083391 Helianthus annuus
HanXRQChr17g0534921 Helianthus annuus
Haze_00917 Corylus avellana
Hma1.2p1_0745F.1_g212030 Hydrangea macrophylla
Hma1.2p1_1898F.1_g306910 Hydrangea macrophylla
HPP92_018490 Vanilla planifolia
Lalb_Chr05g0210951 Lupinus albus
Lalb_Chr09g0319821 Lupinus albus
Lj5g0027866 Lotus japonicus
Lj6P600T27 Lonicera japonica
Lsat_1_v5_gn_1_32540 Lactuca sativa
Lsat_1_v5_gn_2_36061 Lactuca sativa
Lsat_1_v5_gn_3_11160 Lactuca sativa
Lsat_1_v5_gn_7_40400 Lactuca sativa
Lsat_1_v5_gn_8_63541 Lactuca sativa
Lsat_1_v5_gn_9_92701 Lactuca sativa
Manes.02G143000 Manihot esculenta
Manes.15G027800 Manihot esculenta
Mapoly0141s0027 Marchantia polymorpha
MBI01_g45395_MAGBIO Magnolia biondii
MBI04_g40949_MAGBIO Magnolia biondii
MCO13G106 Micromonas commoda
MD13G1191300 Malus domestica
MD16G1191400 Malus domestica
Medtr1g104630 Medicago truncatula
Medtr5g006130 Medicago truncatula
MELO3C006539.2 Cucumis melo
Migut.G00327 Erythranthe guttata
Migut.N00177 Erythranthe guttata
MSTRG.9993 Avicennia marina
Nitab4.5_0000043g0320 Nicotiana tabacum
Nitab4.5_0000321g0050 Nicotiana tabacum
Nitab4.5_0002946g0010 Nicotiana tabacum
Nitab4.5_0014875g0010 Nicotiana tabacum
Nn1g02273 Nelumbo nucifera
Nn4g26289 Nelumbo nucifera
Os08g0560900 Oryza sativa ssp. japonica
Peaxi162Scf00092g00145 Petunia axillaris
Peaxi162Scf00642g00013 Petunia axillaris
PGR004G0890 Punica granatum
PGSC0003DMG400011816 Solanum tuberosum
Phvul.007G055900 Phaseolus vulgaris
Potri.008G151600 Populus trichocarpa
Potri.010G089400 Populus trichocarpa
Pp3c13_2310 Physcomitrium patens
Pp3c14_22550 Physcomitrium patens
Pp3c16_23780 Physcomitrium patens
Pp3c3_5620 Physcomitrium patens
Pp3c6_1620 Physcomitrium patens
PRCOL_00005075 Prasinoderma coloniale
Prupe.1G011500 Prunus persica
Psat4g210680 Pisum sativum
PSO210G3526 Papaver somniferum
PSO761G0667 Papaver somniferum
QL06p003010 Quercus lobata
RcHm_v2.0_Chr4g0416571 Rosa chinensis
Rhsim04G0206400 Rhododendron simsii
Sabra08G0115400 Salix brachista
Sc25g0004390 Simmondsia chinensis
Sed0012901 Sechium edule
Sed0026123 Sechium edule
SEGI_24049 Sequoiadendron giganteum
SEGI_38956 Sequoiadendron giganteum
SGA_v2.0_scaffold39G15267 Striga asiatica
SMO276G0022 Selaginella moellendorffii
Solyc06g054260.1 Solanum lycopersicum
Sopen06g019380 Solanum pennellii
Sp1g02150 Schrenkiella parvula
Sp6g02800 Schrenkiella parvula
TAR365G1144 Trochodendron aralioides
TAR633G1350 Trochodendron aralioides
THA.LOC104801241 Tarenaya hassleriana
THA.LOC104815937 Tarenaya hassleriana
Thecc.01G277200 Theobroma cacao
Thecc.04G229000 Theobroma cacao
Thhalv10029178m.g Eutrema salsugineum
TPR.G37997 Trifolium pratense
TWI53G0112 Tripterygium wilfordii
TWI73G0890 Tripterygium wilfordii
unitig_699.g19993 Utricularia gibba
unitig_747.g21095 Utricularia gibba
VMungo0720G0388 Vigna mungo
Zm00001eb212520 Zea mays

User provided reference genes

Program Settings