Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p07800 Brassica napus
Aa31LG8G13830 Aethionema arabicum
Actinidia29786 Actinidia chinensis
Actinidia37970 Actinidia chinensis
Ah.00g000370 Amaranthus hybridus
AL1G51310 Arabidopsis lyrata
Aqoxy6G01739 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7DZ9XI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYP9FH Arachis hypogaea
AT1G42430 Arabidopsis thaliana
ATR0661G410 Amborella trichopoda
Atru.chr13.150 Acer truncatum
AUR62036884 Chenopodium quinoa
AUR62043351 Chenopodium quinoa
BcaB04g17805 Brassica carinata
BcaC07g37479 Brassica carinata
BolC8t47801H Brassica oleracea
BraA08t32800Z Brassica rapa
C08p09450 Brassica napus
CAN.G311.111 Capsicum annuum
CANSAT25G1550 Cannabis sativa
CARHR292370 Cardamine hirsuta
CARHR292380 Cardamine hirsuta
Carub.0001s3422 Capsella rubella
Ca_15438_v3 Cicer arietinum L.
Cc10_g00730 Coffea canephora
CDE02G2145 Ceratophyllum demersum
CDE04G1085 Ceratophyllum demersum
CDE05G0961 Ceratophyllum demersum
CDE05G2290 Ceratophyllum demersum
CDE05G2857 Ceratophyllum demersum
Cfa014064 Carpinus fangiana
Ciclev10001231m.g Citrus clementina
CiPaw.07G139400 Carya illinoinensis
CiPaw.08G072400 Carya illinoinensis
ClCG08G009480 Citrullus lanatus
ClCG08G009540 Citrullus lanatus
COL.COLO4_04001 Corchorus olitorius
Cpa.g.sc26.206 Carica papaya
Cre05.g248000 Chlamydomonas reinhardtii
CsaV3_6G031620 Cucumis sativus L.
CSS0044612 Camellia sinensis var. sinensis
CSS0047318 Camellia sinensis var. sinensis
CSS0048285 Camellia sinensis var. sinensis
DCAR_016768 Daucus carota
Dinv25909 Davidia involucrata
Dinv31932 Davidia involucrata
Duzib041G0192 Durio zibethinus
Duzib093G0152 Durio zibethinus
Duzib116G0199 Durio zibethinus
ECA232G3530 Erigeron canadensis
EL10Ac1g01976 Beta vulgaris
EL10Ac1g01977 Beta vulgaris
Eucgr.F03550 Eucalyptus grandis
FAN15G3067 Fragaria x ananassa
FAN20G3039 Fragaria x ananassa
FAN27G1062 Fragaria x ananassa
FvH4_2g37530 Fragaria vesca
Glyma.04G018400 Glycine max
Glyma.06G018700 Glycine max
Gohir.A01G106500 Gossypium hirsutum
Gohir.A05G179800 Gossypium hirsutum
Gohir.D01G093000 Gossypium hirsutum
Gohir.D05G182900 Gossypium hirsutum
Gorai.002G118400 Gossypium raimondii
Gorai.009G188200 Gossypium raimondii
GSVIVG01008677001 Vitis vinifera
GSVIVG01023988001 Vitis vinifera
HanXRQChr05g0146811 Helianthus annuus
HanXRQChr14g0428261 Helianthus annuus
HanXRQChr15g0492731 Helianthus annuus
Haze_22759 Corylus avellana
Hma1.2p1_0507F.1_g168400 Hydrangea macrophylla
HPP92_020707 Vanilla planifolia
Hund01763 Selenicereus undatus
Hund05117 Selenicereus undatus
Lalb_Chr11g0061661 Lupinus albus
Lj1g0005022 Lotus japonicus
Lj4A12T77 Lonicera japonica
Lj4A12T78 Lonicera japonica
Lj4A805T24 Lonicera japonica
Lj4C12G4 Lonicera japonica
Lsat_1_v5_gn_2_6461 Lactuca sativa
Lsat_1_v5_gn_9_45021 Lactuca sativa
Manes.05G134900 Manihot esculenta
Manes.18G005900 Manihot esculenta
Mapoly0189s0007 Marchantia polymorpha
MCO11G687 Micromonas commoda
MCO16G542 Micromonas commoda
MD07G1011800 Malus domestica
MD08G1002900 Malus domestica
MD11G1103700 Malus domestica
MD15G1002600 Malus domestica
Medtr3g115210 Medicago truncatula
MELO3C026543.2 Cucumis melo
Migut.C00954 Erythranthe guttata
Nitab4.5_0000588g0160 Nicotiana tabacum
Nitab4.5_0000699g0050 Nicotiana tabacum
Nitab4.5_0006949g0040 Nicotiana tabacum
Nitab4.5_0006949g0050 Nicotiana tabacum
Nitab4.5_0006949g0060 Nicotiana tabacum
Nitab4.5_0010763g0030 Nicotiana tabacum
Nn5g30931 Nelumbo nucifera
Nn6g31744 Nelumbo nucifera
Oeu056211.1 Olea europaea
Os03g0133300 Oryza sativa ssp. japonica
Peaxi162Scf00064g01132 Petunia axillaris
Peaxi162Scf00447g00052 Petunia axillaris
Peaxi162Scf00893g00434 Petunia axillaris
PGR031G0851 Punica granatum
PGR031G1697 Punica granatum
PGSC0003DMG400009975 Solanum tuberosum
PGSC0003DMG400029318 Solanum tuberosum
PGSC0003DMG400033656 Solanum tuberosum
Phvul.009G010200 Phaseolus vulgaris
Phvul.L001638 Phaseolus vulgaris
Potri.002G011300 Populus trichocarpa
Potri.005G249700 Populus trichocarpa
Pp3c11_25930 Physcomitrium patens
Pp3c7_400 Physcomitrium patens
Prupe.1G354900 Prunus persica
Psat5g011520 Pisum sativum
PSO541G0908 Papaver somniferum
PSO675G0524 Papaver somniferum
QL02p013984 Quercus lobata
RcHm_v2.0_Chr6g0304201 Rosa chinensis
Rhsim06G0008000 Rhododendron simsii
Rhsim07G0254700 Rhododendron simsii
Sabra05G0193200 Salix brachista
Sc15g0004500 Simmondsia chinensis
Sed0024410 Sechium edule
SEGI_03937 Sequoiadendron giganteum
SGA_v2.0_scaffold275G46591 Striga asiatica
SMO169G0316 Selaginella moellendorffii
SMO202G0022 Selaginella moellendorffii
Solyc04g082290.4 Solanum lycopersicum
Solyc12g094570.1 Solanum lycopersicum
Solyc12g094580.3 Solanum lycopersicum
Sopen04g035910 Solanum pennellii
Sopen12g031480 Solanum pennellii
Sp1g32010 Schrenkiella parvula
TAR376G0430 Trochodendron aralioides
TAR381G0464 Trochodendron aralioides
TAR625G0334 Trochodendron aralioides
THA.LOC104813167 Tarenaya hassleriana
Thecc.08G058000 Theobroma cacao
Thhalv10004272m.g Eutrema salsugineum
TPR.G38127 Trifolium pratense
TWI36G0356 Tripterygium wilfordii
TWI56G0787 Tripterygium wilfordii
unitig_748.g7709 Utricularia gibba
unitig_82.g27116 Utricularia gibba
vmacro04401 Vaccinium macrocarpon
vmacro21824 Vaccinium macrocarpon
VMungo1309G2703 Vigna mungo
Zm00001eb002680 Zea mays
Zm00001eb402600 Zea mays

User provided reference genes

Program Settings