Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p37600 Brassica napus
A09p05250 Brassica napus
Aa31LG11G9160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis
Actinidia05726 Actinidia chinensis
AL6G39630 Arabidopsis lyrata
Aqoxy2G03209 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea
AT5G27395 Arabidopsis thaliana
ATR0626G318 Amborella trichopoda
Atru.chr2.494 Acer truncatum
AUR62000861 Chenopodium quinoa
AUR62005113 Chenopodium quinoa
BcaB01g02118 Brassica carinata
BcaB02g10346 Brassica carinata
BcaB04g19666 Brassica carinata
BcaC02g11915 Brassica carinata
BcaC04g20970 Brassica carinata
BcaC04g22128 Brassica carinata
BcaC07g37284 Brassica carinata
BcaC09g50421 Brassica carinata
BcaC09g50422 Brassica carinata
BcaNung02466 Brassica carinata
BcaNung04365 Brassica carinata
BolC1t02515H Brassica oleracea
BolC2t08054H Brassica oleracea
BolC4t23587H Brassica oleracea
BolC4t23591H Brassica oleracea
BolC5t32959H Brassica oleracea
BolC5t32960H Brassica oleracea
BolC7t43257H Brassica oleracea
BolC7t44599H Brassica oleracea
BolC8t47558H Brassica oleracea
BolC9t53500H Brassica oleracea
BolC9t56574H Brassica oleracea
BraA06t26679Z Brassica rapa
C01p25640 Brassica napus
C02p33910 Brassica napus
C03p71850 Brassica napus
C04p09800 Brassica napus
C04p20640 Brassica napus
C04p31600 Brassica napus
C05p42320 Brassica napus
C07p10570 Brassica napus
C07p27290 Brassica napus
C07p40710 Brassica napus
C08p07130 Brassica napus
C09p05710 Brassica napus
C09p20670 Brassica napus
C09p23030 Brassica napus
C09p29080 Brassica napus
CAN.G1134.17 Capsicum annuum
CANSAT54G0471 Cannabis sativa
CARHR185980 Cardamine hirsuta
Carub.0006s2516 Capsella rubella
CBR_g37761 Chara braunii
Cc02_g32600 Coffea canephora
Cc02_g32610 Coffea canephora
CDE12G0359 Ceratophyllum demersum
Cfa006537 Carpinus fangiana
Ciclev10001987m.g Citrus clementina
CiPaw.08G167100 Carya illinoinensis
COL.COLO4_13522 Corchorus olitorius
Cpa.g.sc48.6 Carica papaya
Cre02.g117300 Chlamydomonas reinhardtii
CsaV3_1G039190 Cucumis sativus L.
CSS0002320 Camellia sinensis var. sinensis
CSS0009134 Camellia sinensis var. sinensis
CSS0011661 Camellia sinensis var. sinensis
CSS0015750 Camellia sinensis var. sinensis
CSS0019992 Camellia sinensis var. sinensis
CSS0023662 Camellia sinensis var. sinensis
CSS0033019 Camellia sinensis var. sinensis
CSS0041443 Camellia sinensis var. sinensis
DCAR_015964 Daucus carota
Dinv40253 Davidia involucrata
Duzib128G1218 Durio zibethinus
ECA232G1001 Erigeron canadensis
EL10Ac4g09300 Beta vulgaris
Eucgr.B02002 Eucalyptus grandis
FAN02G3501 Fragaria x ananassa
FAN05G3359 Fragaria x ananassa
FAN05G4103 Fragaria x ananassa
FAN09G4458 Fragaria x ananassa
FAN14G3061 Fragaria x ananassa
FAN14G4578 Fragaria x ananassa
FvH4_6g05290 Fragaria vesca
Glyma.10G157300 Glycine max
Glyma.20G231400 Glycine max
Gohir.A08G212400 Gossypium hirsutum
Gohir.D08G229400 Gossypium hirsutum
Gorai.004G243600 Gossypium raimondii
GSVIVG01000001001 Vitis vinifera
GSVIVG01022058001 Vitis vinifera
HanXRQChr09g0258721 Helianthus annuus
HanXRQChr13g0397031 Helianthus annuus
Haze_04249 Corylus avellana
HPP92_006941 Vanilla planifolia
Hund07039 Selenicereus undatus
Lalb_Chr02g0148411 Lupinus albus
Lj5g0014952 Lotus japonicus
Lj9A681T39 Lonicera japonica
Lsat_1_v5_gn_8_116060 Lactuca sativa
Manes.09G163100 Manihot esculenta
Mapoly0007s0105 Marchantia polymorpha
MBI17_g29025_MAGBIO Magnolia biondii
MCO14G439 Micromonas commoda
MD04G1209800 Malus domestica
MD04G1209900 Malus domestica
MD12G1224400 Malus domestica
Medtr1g082380 Medicago truncatula
MELO3C015343.2 Cucumis melo
Migut.B01124 Erythranthe guttata
MSTRG.20469 Avicennia marina
Nitab4.5_0004940g0150 Nicotiana tabacum
Nitab4.5_0015025g0020 Nicotiana tabacum
Nn1g02102 Nelumbo nucifera
Oeu012099.1 Olea europaea
Os07g0647300 Oryza sativa ssp. japonica
Peaxi162Scf00434g00335 Petunia axillaris
PGR083G0604 Punica granatum
PGR083G1611 Punica granatum
PGSC0003DMG400028600 Solanum tuberosum
Phvul.007G182600 Phaseolus vulgaris
Potri.013G026700 Populus trichocarpa
Pp3c24_5170 Physcomitrium patens
Prupe.6G330700 Prunus persica
PSO170G6761 Papaver somniferum
PSO407G0072 Papaver somniferum
QL03p004304 Quercus lobata
RcHm_v2.0_Chr3g0454031 Rosa chinensis
RcHm_v2.0_Chr4g0415731 Rosa chinensis
Rhsim07G0179300 Rhododendron simsii
Sabra13G0027500 Salix brachista
SalBow8G2842 Salvia bowleyana
Sc09g0003370 Simmondsia chinensis
Sed0016876 Sechium edule
SEGI_04064 Sequoiadendron giganteum
SEGI_25140 Sequoiadendron giganteum
SGA_v2.0_scaffold199G41179 Striga asiatica
SHI18214 Sapria himalayana
SMO115G0217 Selaginella moellendorffii
Solyc01g098630.3 Solanum lycopersicum
Sopen01g042180 Solanum pennellii
Sp2g20610 Schrenkiella parvula
TAR365G0571 Trochodendron aralioides
THA.LOC104818675 Tarenaya hassleriana
Thecc.05G300000 Theobroma cacao
Thhalv10004565m.g Eutrema salsugineum
TPR.G2750 Trifolium pratense
TWI56G1338 Tripterygium wilfordii
unitig_747.g21345 Utricularia gibba
unitig_747.g21346 Utricularia gibba
vmacro05035 Vaccinium macrocarpon
VMungo0720G0951 Vigna mungo
Zm00001eb329390 Zea mays

User provided reference genes

Program Settings