Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p11090 Brassica napus
A10p17780 Brassica napus
Aa31LG1G12570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis
Actinidia07134 Actinidia chinensis
Actinidia28417 Actinidia chinensis
Ah.15g094800 Amaranthus hybridus
AL4G25930 Arabidopsis lyrata
AL8G37180 Arabidopsis lyrata
Aqoxy3G03284 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea
AT5G60590 Arabidopsis thaliana
ATR0115G025 Amborella trichopoda
Atru.chr3.3636 Acer truncatum
AUR62001379 Chenopodium quinoa
AUR62009522 Chenopodium quinoa
AUR62013942 Chenopodium quinoa
AUR62017074 Chenopodium quinoa
AUR62025599 Chenopodium quinoa
BcaB01g04662 Brassica carinata
BcaB08g36354 Brassica carinata
BolC3t13744H Brassica oleracea
BolC9t58203H Brassica oleracea
BraA03t10423Z Brassica rapa
BraA10t43855Z Brassica rapa
C03p12780 Brassica napus
C09p53290 Brassica napus
CAN.G1153.4 Capsicum annuum
CAN.G604.3 Capsicum annuum
CAN.G631.22 Capsicum annuum
CANSAT54G0849 Cannabis sativa
CARHR274250 Cardamine hirsuta
Carub.0008s2127 Capsella rubella
Ca_05255_v3 Cicer arietinum L.
Ca_29294_v3 Cicer arietinum L.
CBR_g23835 Chara braunii
CBR_g32631 Chara braunii
CBR_g359 Chara braunii
Cc01_g11180 Coffea canephora
CDE09G0954 Ceratophyllum demersum
Cfa011322 Carpinus fangiana
Ciclev10029204m.g Citrus clementina
CiPaw.13G112500 Carya illinoinensis
ClCG03G002070 Citrullus lanatus
COL.COLO4_18340 Corchorus olitorius
Cpa.g.sc216.14 Carica papaya
Cre05.g234657 Chlamydomonas reinhardtii
CsaV3_1G012730 Cucumis sativus L.
CSS0022919 Camellia sinensis var. sinensis
CSS0023307 Camellia sinensis var. sinensis
CSS0027878 Camellia sinensis var. sinensis
CSS0039805 Camellia sinensis var. sinensis
DCAR_006058 Daucus carota
DCAR_013489 Daucus carota
Dinv32752 Davidia involucrata
Dinv32753 Davidia involucrata
Duzib168G0882 Durio zibethinus
ECA248G0132 Erigeron canadensis
EL10Ac7g18241 Beta vulgaris
Eucgr.B02494 Eucalyptus grandis
FAN11G0836 Fragaria x ananassa
FAN16G0772 Fragaria x ananassa
FAN21G1816 Fragaria x ananassa
FAN25G2211 Fragaria x ananassa
FvH4_3g32470 Fragaria vesca
Glyma.11G147000 Glycine max
Glyma.12G067902 Glycine max
Gohir.A13G230400 Gossypium hirsutum
Gohir.D13G235900 Gossypium hirsutum
Gorai.013G266600 Gossypium raimondii
GSVIVG01025180001 Vitis vinifera
HanXRQChr01g0016861 Helianthus annuus
Haze_10438 Corylus avellana
Haze_26358 Corylus avellana
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla
HPP92_018599 Vanilla planifolia
Hund02313 Selenicereus undatus
Hund10347 Selenicereus undatus
Lalb_Chr19g0137311 Lupinus albus
Lj1A191G19 Lonicera japonica
Lj3g0003868 Lotus japonicus
Lsat_1_v5_gn_1_65361 Lactuca sativa
Lsat_1_v5_gn_5_178620 Lactuca sativa
Manes.11G144600 Manihot esculenta
Mapoly0053s0017 Marchantia polymorpha
MBI07_g19316_MAGBIO Magnolia biondii
MCO01G111 Micromonas commoda
MD03G1117100 Malus domestica
MD11G1134900 Malus domestica
Medtr4g059530 Medicago truncatula
Medtr4g459430 Medicago truncatula
MELO3C026847.2 Cucumis melo
Migut.D02219 Erythranthe guttata
MSTRG.17807 Avicennia marina
Nitab4.5_0000650g0230 Nicotiana tabacum
Nitab4.5_0004205g0030 Nicotiana tabacum
Nitab4.5_0005621g0150 Nicotiana tabacum
Nitab4.5_0005621g0170 Nicotiana tabacum
Nitab4.5_0005621g0180 Nicotiana tabacum
Nitab4.5_0006639g0020 Nicotiana tabacum
Nitab4.5_0006639g0040 Nicotiana tabacum
Nitab4.5_0006639g0050 Nicotiana tabacum
Nitab4.5_0006639g0060 Nicotiana tabacum
Nitab4.5_0006639g0090 Nicotiana tabacum
Nitab4.5_0012973g0010 Nicotiana tabacum
Nn2g13092 Nelumbo nucifera
Oeu002864.1 Olea europaea
Oeu059598.1 Olea europaea
Os03g0201600 Oryza sativa ssp. japonica
Peaxi162Scf00270g00828 Petunia axillaris
PGR102G0162 Punica granatum
PGSC0003DMG400008104 Solanum tuberosum
Phvul.011G078800 Phaseolus vulgaris
Potri.009G025500 Populus trichocarpa
Pp3c1_35360 Physcomitrium patens
PRCOL_00000940 Prasinoderma coloniale
PRCOL_00005540 Prasinoderma coloniale
Prupe.6G100900 Prunus persica
Psat1g080680 Pisum sativum
PSO017G0942 Papaver somniferum
PSO063G6287 Papaver somniferum
PSO339G4039 Papaver somniferum
PSO478G0080 Papaver somniferum
QL01p022329 Quercus lobata
QL03p063529 Quercus lobata
QL03p063925 Quercus lobata
RcHm_v2.0_Chr5g0059481 Rosa chinensis
Rhsim01G0217400 Rhododendron simsii
Rhsim13G0094100 Rhododendron simsii
Sabra09G0016900 Salix brachista
SalBow3G2420 Salvia bowleyana
SalBow6G5279 Salvia bowleyana
Sc03g0007720 Simmondsia chinensis
Sed0020077 Sechium edule
SEGI_11191 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00896 Striga asiatica
SGA_v2.0_scaffold80G25763 Striga asiatica
SHI25734 Sapria himalayana
SHI25735 Sapria himalayana
SMO232G0060 Selaginella moellendorffii
Solyc11g069360.2 Solanum lycopersicum
Sopen11g028080 Solanum pennellii
Sp6g22160 Schrenkiella parvula
TAR623G1761 Trochodendron aralioides
TAR633G2157 Trochodendron aralioides
THA.LOC104799500 Tarenaya hassleriana
Thecc.09G339900 Theobroma cacao
Thhalv10014329m.g Eutrema salsugineum
TPR.G15569 Trifolium pratense
TWI79G0533 Tripterygium wilfordii
unitig_749.g13641 Utricularia gibba
vmacro03196 Vaccinium macrocarpon
VMungo1127G1456 Vigna mungo
Zm00001eb007760 Zea mays

User provided reference genes

Program Settings