Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40280 Brassica napus
A03p38110 Brassica napus
A05p36340 Brassica napus
Aa31LG10G450 Aethionema arabicum
Aa31LG10G470 Aethionema arabicum
Aa31LG8G500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3155 Anthoceros agrestis
Actinidia10581 Actinidia chinensis
Actinidia30368 Actinidia chinensis
Ah.06g180950 Amaranthus hybridus
Ah.06g180960 Amaranthus hybridus
AL3G25090 Arabidopsis lyrata
AL3G34310 Arabidopsis lyrata
AL5G25300 Arabidopsis lyrata
Aqoxy4G02317 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C1KQ7I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EI2AUC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4UTE8 Arachis hypogaea
AT3G13235 Arabidopsis thaliana
ATR0587G001 Amborella trichopoda
Atru.chr2.3848 Acer truncatum
AUR62017165 Chenopodium quinoa
AUR62020809 Chenopodium quinoa
AUR62035639 Chenopodium quinoa
BolC1t05127H Brassica oleracea
BolC3t16895H Brassica oleracea
BraA01t04064Z Brassica rapa
BraA03t12964Z Brassica rapa
C01p51800 Brassica napus
C03p46240 Brassica napus
CAN.G492.45 Capsicum annuum
CANSAT11G0422 Cannabis sativa
CARHR087890 Cardamine hirsuta
Carub.0003s1265 Capsella rubella
Ca_07476_v3 Cicer arietinum L.
Ca_14850_v3 Cicer arietinum L.
CBR_g31527 Chara braunii
CBR_g36902 Chara braunii
Cc05_g15480 Coffea canephora
CDE05G0237 Ceratophyllum demersum
CDE05G1534 Ceratophyllum demersum
CDE05G1663 Ceratophyllum demersum
CDE05G2773 Ceratophyllum demersum
CDE05G3009 Ceratophyllum demersum
Cfa016939 Carpinus fangiana
Cfa022177 Carpinus fangiana
Ciclev10008478m.g Citrus clementina
CiPaw.12G141700 Carya illinoinensis
ClCG09G021670 Citrullus lanatus
COL.COLO4_07760 Corchorus olitorius
Cpa.g.sc12.91 Carica papaya
Cre10.g447300 Chlamydomonas reinhardtii
CsaV3_7G021370 Cucumis sativus L.
CSS0013715 Camellia sinensis var. sinensis
CSS0026438 Camellia sinensis var. sinensis
CSS0036658 Camellia sinensis var. sinensis
CSS0047513 Camellia sinensis var. sinensis
CSS0047803 Camellia sinensis var. sinensis
DCAR_017596 Daucus carota
Dinv40894 Davidia involucrata
Duzib213G0525 Durio zibethinus
Duzib268G0270 Durio zibethinus
ECA236G2785 Erigeron canadensis
EL10Ac4g07509 Beta vulgaris
Eucgr.F03661 Eucalyptus grandis
FAN11G3108 Fragaria x ananassa
FAN16G3187 Fragaria x ananassa
FAN21G2140 Fragaria x ananassa
FAN25G0703 Fragaria x ananassa
FvH4_3g42010 Fragaria vesca
Glyma.08G337500 Glycine max
Glyma.10G116100 Glycine max
Glyma.18G072500 Glycine max
Gohir.A04G003100 Gossypium hirsutum
Gohir.A13G130142 Gossypium hirsutum
Gohir.D05G386600 Gossypium hirsutum
Gohir.D13G133200 Gossypium hirsutum
Gorai.009G453300 Gossypium raimondii
Gorai.013G149500 Gossypium raimondii
GSVIVG01014786001 Vitis vinifera
HanXRQChr05g0144601 Helianthus annuus
HanXRQChr05g0160221 Helianthus annuus
HanXRQChr08g0229721 Helianthus annuus
HanXRQChr11g0334621 Helianthus annuus
HanXRQChr12g0367991 Helianthus annuus
HanXRQChr16g0512931 Helianthus annuus
Haze_09894 Corylus avellana
Hma1.2p1_0193F.1_g084100 Hydrangea macrophylla
Hma1.2p1_2995F.1_g331425 Hydrangea macrophylla
HPP92_021912 Vanilla planifolia
Hund22995 Selenicereus undatus
Lalb_Chr15g0082461 Lupinus albus
Lj1C897G12 Lonicera japonica
Lj6g0013957 Lotus japonicus
Lsat_1_v5_gn_7_116460 Lactuca sativa
Manes.05G206400 Manihot esculenta
Mapoly0030s0110 Marchantia polymorpha
MBI14_g00953_MAGBIO Magnolia biondii
MCO11G772 Micromonas commoda
MD03G1039600 Malus domestica
MD05G1213200 Malus domestica
MD05G1213500 Malus domestica
MD11G1040100 Malus domestica
MD12G1084200 Malus domestica
MELO3C013214.2 Cucumis melo
Migut.M01599 Erythranthe guttata
MSTRG.7029 Avicennia marina
Nitab4.5_0001622g0040 Nicotiana tabacum
Nitab4.5_0007214g0010 Nicotiana tabacum
Nn1g07694 Nelumbo nucifera
Oeu019694.2 Olea europaea
Oeu019695.1 Olea europaea
Oeu026626.2 Olea europaea
Os02g0198600 Oryza sativa ssp. japonica
Peaxi162Scf00219g00158 Petunia axillaris
PGR031G2516 Punica granatum
PGSC0003DMG400014406 Solanum tuberosum
Phvul.006G060300 Phaseolus vulgaris
Potri.001G469300 Populus trichocarpa
Potri.011G166100 Populus trichocarpa
Pp3c17_4800 Physcomitrium patens
Pp3c4_20890 Physcomitrium patens
PRCOL_00000426 Prasinoderma coloniale
Prupe.6G031700 Prunus persica
Psat5g164640 Pisum sativum
PSO541G2325 Papaver somniferum
QL05p082689 Quercus lobata
QL05p082760 Quercus lobata
QL08p001615 Quercus lobata
RcHm_v2.0_Chr5g0075221 Rosa chinensis
Rhsim06G0233900 Rhododendron simsii
Sabra11G0139800 Salix brachista
Sabra16G0318300 Salix brachista
Sc03g0011700 Simmondsia chinensis
Sed0006020 Sechium edule
Sed0022757 Sechium edule
SGA_v2.0_scaffold168G38588 Striga asiatica
Solyc10g005890.3 Solanum lycopersicum
Sopen10g001840 Solanum pennellii
Sp3g11470 Schrenkiella parvula
TAR624G0837 Trochodendron aralioides
TAR626G0684 Trochodendron aralioides
THA.LOC104801910 Tarenaya hassleriana
THA.LOC104810298 Tarenaya hassleriana
THA.LOC104815684 Tarenaya hassleriana
Thecc.07G005400 Theobroma cacao
Thhalv10020839m.g Eutrema salsugineum
TPR.G17932 Trifolium pratense
TWI38G1265 Tripterygium wilfordii
TWI38G2408 Tripterygium wilfordii
unitig_699.g19599 Utricularia gibba
unitig_899.g15265 Utricularia gibba
unitig_899.g15266 Utricularia gibba
vmacro11628 Vaccinium macrocarpon
VMungo0540G0162 Vigna mungo
VMungo0954G0002 Vigna mungo
Zm00001eb205890 Zea mays

User provided reference genes

Program Settings