Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG6G8480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3931 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.759 Anthoceros agrestis
Actinidia21527 Actinidia chinensis
Actinidia30721 Actinidia chinensis
Ah.12g065100 Amaranthus hybridus
AL1G49060 Arabidopsis lyrata
AL7G44820 Arabidopsis lyrata
Aqoxy2G00300 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.30UV9I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FEA8VP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7XKIQ Arachis hypogaea
AT1G34570 Arabidopsis thaliana
AT3G15750 Arabidopsis thaliana
ATR0217G019 Amborella trichopoda
ATR0721G140 Amborella trichopoda
Atru.chr11.2466 Acer truncatum
Atru.chr11.2495 Acer truncatum
Atru.chr11.786 Acer truncatum
AUR62017456 Chenopodium quinoa
AUR62026828 Chenopodium quinoa
AUR62037226 Chenopodium quinoa
BcaB04g17864 Brassica carinata
BcaB07g33112 Brassica carinata
BcaC07g37535 Brassica carinata
BcaC08g43772 Brassica carinata
C06p11480 Brassica napus
CAN.G1571.2 Capsicum annuum
CAN.G745.15 Capsicum annuum
CANSAT35G1099 Cannabis sativa
CARHR033890 Cardamine hirsuta
Carub.0001s3260 Capsella rubella
Carub.0007s3712 Capsella rubella
Ca_14312_v3 Cicer arietinum L.
Ca_20912_v3 Cicer arietinum L.
Cc02_g29120 Coffea canephora
CDE08G1561 Ceratophyllum demersum
Cfa010862 Carpinus fangiana
Ciclev10017990m.g Citrus clementina
Ciclev10032728m.g Citrus clementina
CiPaw.13G010800 Carya illinoinensis
CiPaw.14G006000 Carya illinoinensis
ClCG05G020790 Citrullus lanatus
COL.COLO4_25832 Corchorus olitorius
COL.COLO4_29439 Corchorus olitorius
Cpa.g.sc197.6 Carica papaya
Cre09.g388245 Chlamydomonas reinhardtii
CsaV3_5G036510 Cucumis sativus L.
CSS0012283 Camellia sinensis var. sinensis
CSS0050281 Camellia sinensis var. sinensis
DCAR_009134 Daucus carota
DCAR_024211 Daucus carota
DCAR_031824 Daucus carota
Dinv31495 Davidia involucrata
Dinv32050 Davidia involucrata
Duzib114G1022 Durio zibethinus
Duzib128G1390 Durio zibethinus
ECA248G0603 Erigeron canadensis
ECA248G0821 Erigeron canadensis
ECA248G3322 Erigeron canadensis
EL10Ac2g02852 Beta vulgaris
Eucgr.G03257 Eucalyptus grandis
FAN03G3254 Fragaria x ananassa
FAN08G2679 Fragaria x ananassa
FAN10G0154 Fragaria x ananassa
FAN11G0237 Fragaria x ananassa
FAN13G2986 Fragaria x ananassa
FAN18G3634 Fragaria x ananassa
FvH4_3g19550 Fragaria vesca
FvH4_5g29020 Fragaria vesca
Glyma.11G113600 Glycine max
Glyma.12G039500 Glycine max
Gohir.A05G333100 Gossypium hirsutum
Gohir.D04G071400 Gossypium hirsutum
Gorai.012G080400 Gossypium raimondii
GSVIVG01022405001 Vitis vinifera
HanXRQChr13g0394011 Helianthus annuus
HanXRQChr15g0493861 Helianthus annuus
Haze_03089 Corylus avellana
Hma1.2p1_0902F.1_g234830 Hydrangea macrophylla
HPP92_010478 Vanilla planifolia
Hund13330 Selenicereus undatus
Lalb_Chr19g0138841 Lupinus albus
Lj1A1244T16 Lonicera japonica
Lj1C1244T2 Lonicera japonica
Lj2g0001718 Lotus japonicus
Lj3g0020788 Lotus japonicus
Lj9A646T46 Lonicera japonica
Lsat_1_v5_gn_1_97861 Lactuca sativa
Manes.11G002700 Manihot esculenta
Mapoly0122s0047 Marchantia polymorpha
MBI13_g05162_MAGBIO Magnolia biondii
MBI13_g05166_MAGBIO Magnolia biondii
MCO07G134 Micromonas commoda
MD00G1188600 Malus domestica
MD02G1294600 Malus domestica
MD07G1031900 Malus domestica
Medtr4g071040 Medicago truncatula
MELO3C012448.2 Cucumis melo
Migut.B01205 Erythranthe guttata
MSTRG.20534 Avicennia marina
Nitab4.5_0000316g0040 Nicotiana tabacum
Nitab4.5_0013777g0030 Nicotiana tabacum
Oeu062071.1 Olea europaea
Os01g0950800 Oryza sativa ssp. japonica
Os10g0580500 Oryza sativa ssp. japonica
Os11g0210000 Oryza sativa ssp. japonica
Peaxi162Scf00047g02136 Petunia axillaris
Peaxi162Scf00309g00324 Petunia axillaris
PGR031G2747 Punica granatum
PGSC0003DMG400023243 Solanum tuberosum
Phvul.010G125900 Phaseolus vulgaris
Potri.001G024000 Populus trichocarpa
Potri.003G201500 Populus trichocarpa
Pp3c5_22730 Physcomitrium patens
Prupe.2G029400 Prunus persica
Psat7g182960 Pisum sativum
PSO017G3894 Papaver somniferum
PSO063G4454 Papaver somniferum
PSO170G0256 Papaver somniferum
PSO528G0152 Papaver somniferum
QL02p069618 Quercus lobata
QL04p013733 Quercus lobata
RcHm_v2.0_Chr1g0319701 Rosa chinensis
RcHm_v2.0_Chr7g0218601 Rosa chinensis
Rhsim07G0062700 Rhododendron simsii
Sabra01G0018000 Salix brachista
Sabra03G0149000 Salix brachista
SalBow1G4372 Salvia bowleyana
SalBow5G1211 Salvia bowleyana
SalBow5G1267 Salvia bowleyana
Sc10g0004260 Simmondsia chinensis
Sed0010230 Sechium edule
Sed0015753 Sechium edule
SEGI_15222 Sequoiadendron giganteum
SEGI_29054 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32802 Striga asiatica
SMO137G0333 Selaginella moellendorffii
SMO170G0061 Selaginella moellendorffii
Solyc01g068450.4 Solanum lycopersicum
Sopen01g030410 Solanum pennellii
Sp1g29690 Schrenkiella parvula
Sp7g17090 Schrenkiella parvula
TAR053G0004 Trochodendron aralioides
TAR369G0595 Trochodendron aralioides
THA.LOC104819124 Tarenaya hassleriana
Thecc.10G006000 Theobroma cacao
Thhalv10009671m.g Eutrema salsugineum
TPR.G30506 Trifolium pratense
TPR.G3881 Trifolium pratense
TWI38G0287 Tripterygium wilfordii
TWI63G1183 Tripterygium wilfordii
vmacro13728 Vaccinium macrocarpon
VMungo1127G0155 Vigna mungo
VMungo1127G1982 Vigna mungo
Zm00001eb140990 Zea mays
Zm00001eb363050 Zea mays

User provided reference genes

Program Settings