Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03790 Brassica napus
A09p49980 Brassica napus
Aa31LG10G11980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2771 Anthoceros agrestis
Actinidia38152 Actinidia chinensis
Ah.04g151080 Amaranthus hybridus
AL5G38540 Arabidopsis lyrata
Aqoxy2G00344 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0AC10P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F5KNV4 Arachis hypogaea
AT3G57060 Arabidopsis thaliana
ATR0745G001 Amborella trichopoda
Atru.chr1.1489 Acer truncatum
AUR62030338 Chenopodium quinoa
AUR62040826 Chenopodium quinoa
BcaB02g08331 Brassica carinata
BcaC02g09900 Brassica carinata
BcaC07g40050 Brassica carinata
BcaC07g40081 Brassica carinata
BcaNung07305 Brassica carinata
BolC4t25093H Brassica oleracea
BolC8t50853H Brassica oleracea
BraA04t16055Z Brassica rapa
BraA09t40448Z Brassica rapa
C04p35390 Brassica napus
C08p32390 Brassica napus
CAN.G641.74 Capsicum annuum
CANSAT56G2079 Cannabis sativa
CARHR167250 Cardamine hirsuta
Carub.0005s2386 Capsella rubella
Ca_26637_v3 Cicer arietinum L.
CBR_g63081 Chara braunii
Cc06_g18890 Coffea canephora
CDE04G0055 Ceratophyllum demersum
CDE04G1839 Ceratophyllum demersum
Cfa024947 Carpinus fangiana
Ciclev10018515m.g Citrus clementina
CiPaw.09G045900 Carya illinoinensis
CiPaw.16G087800 Carya illinoinensis
ClCG10G016070 Citrullus lanatus
COL.COLO4_34262 Corchorus olitorius
COL.COLO4_37951 Corchorus olitorius
COL.COLO4_37953 Corchorus olitorius
Cpa.g.sc5.207 Carica papaya
Cre10.g432500 Chlamydomonas reinhardtii
CsaV3_3G040360 Cucumis sativus L.
CSS0013313 Camellia sinensis var. sinensis
CSS0046388 Camellia sinensis var. sinensis
DCAR_016876 Daucus carota
Dinv08512 Davidia involucrata
Duzib106G0250 Durio zibethinus
ECA236G3238 Erigeron canadensis
EL10Ac3g07209 Beta vulgaris
Eucgr.A02262 Eucalyptus grandis
FAN02G3171 Fragaria x ananassa
FAN05G3456 Fragaria x ananassa
FAN09G3373 Fragaria x ananassa
FAN14G4483 Fragaria x ananassa
FvH4_6g25220 Fragaria vesca
FvH4_6g26040 Fragaria vesca
Glyma.02G157700 Glycine max
Gohir.A11G308300 Gossypium hirsutum
Gohir.D11G323700 Gossypium hirsutum
Gorai.007G353800 Gossypium raimondii
GSVIVG01005995001 Vitis vinifera
GSVIVG01033598001 Vitis vinifera
HanXRQChr05g0161121 Helianthus annuus
HanXRQChr06g0176911 Helianthus annuus
Haze_19715 Corylus avellana
Haze_26650 Corylus avellana
Hma1.2p1_0682F.1_g202500 Hydrangea macrophylla
HPP92_025012 Vanilla planifolia
Hund24628 Selenicereus undatus
Lalb_Chr02g0156531 Lupinus albus
Lalb_Chr06g0173601 Lupinus albus
Lalb_Chr06g0173611 Lupinus albus
Lalb_Chr06g0173621 Lupinus albus
Lj1A1104G73 Lonicera japonica
Lj5g0012838 Lotus japonicus
Lsat_1_v5_gn_8_82681 Lactuca sativa
Manes.08G057600 Manihot esculenta
Mapoly0022s0167 Marchantia polymorpha
MBI05_g18177_MAGBIO Magnolia biondii
MBI05_g39343_MAGBIO Magnolia biondii
MBI06_g41970_MAGBIO Magnolia biondii
MBI08_g05534_MAGBIO Magnolia biondii
MBI08_g38609_MAGBIO Magnolia biondii
MBI08_g39158_MAGBIO Magnolia biondii
MBI08_g40283_MAGBIO Magnolia biondii
MBI11_g15185_MAGBIO Magnolia biondii
MBI13_g01621_MAGBIO Magnolia biondii
MBI13_g41158_MAGBIO Magnolia biondii
MBI13_g41314_MAGBIO Magnolia biondii
MBI13_g46003_MAGBIO Magnolia biondii
MBI15_g03986_MAGBIO Magnolia biondii
MBI15_g38850_MAGBIO Magnolia biondii
MBI16_g48278_MAGBIO Magnolia biondii
MCO05G584 Micromonas commoda
MD14G1099800 Malus domestica
Medtr1g051230 Medicago truncatula
MELO3C008538.2 Cucumis melo
MELO3C009773.2 Cucumis melo
MELO3C029978.2 Cucumis melo
Migut.J01674 Erythranthe guttata
MSTRG.19816 Avicennia marina
Nitab4.5_0000571g0090 Nicotiana tabacum
Nitab4.5_0001364g0050 Nicotiana tabacum
Nn2g14888 Nelumbo nucifera
Oeu029496.3 Olea europaea
Os07g0659500 Oryza sativa ssp. japonica
Peaxi162Scf00970g00168 Petunia axillaris
Peaxi162Scf01378g00118 Petunia axillaris
PGR031G1006 Punica granatum
PGSC0003DMG400020858 Solanum tuberosum
PGSC0003DMG400020862 Solanum tuberosum
PGSC0003DMG400029835 Solanum tuberosum
Phvul.007G247800 Phaseolus vulgaris
Potri.006G041500 Populus trichocarpa
Pp3c12_12160 Physcomitrium patens
Pp3c3_32300 Physcomitrium patens
PRCOL_00006547 Prasinoderma coloniale
Prupe.7G042500 Prunus persica
Psat6g123240 Pisum sativum
Psat7g124520 Pisum sativum
Psat7g124600 Pisum sativum
PSO339G0660 Papaver somniferum
PSO384G2446 Papaver somniferum
QL07p008767 Quercus lobata
RcHm_v2.0_Chr2g0125151 Rosa chinensis
Rhsim04G0110600 Rhododendron simsii
Rhsim06G0100000 Rhododendron simsii
Sabra06G0028200 Salix brachista
SalBow8G3517 Salvia bowleyana
SalBow8G5198 Salvia bowleyana
SalBow8G5420 Salvia bowleyana
Sc19g0008270 Simmondsia chinensis
Sed0020412 Sechium edule
SEGI_14640 Sequoiadendron giganteum
SEGI_37933 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30304 Striga asiatica
SHI28279 Sapria himalayana
SHI28280 Sapria himalayana
SMO351G0392 Selaginella moellendorffii
Solyc10g079730.3 Solanum lycopersicum
Sopen10g030360 Solanum pennellii
Sp5g05520 Schrenkiella parvula
TAR636G3632 Trochodendron aralioides
THA.LOC104824412 Tarenaya hassleriana
Thecc.05G139800 Theobroma cacao
Thhalv10005748m.g Eutrema salsugineum
TPR.G19659 Trifolium pratense
TPR.G29585 Trifolium pratense
TWI53G0771 Tripterygium wilfordii
unitig_21.g20921 Utricularia gibba
vmacro09030 Vaccinium macrocarpon
VMungo0720G1740 Vigna mungo
Zm00001eb329790 Zea mays

User provided reference genes

Program Settings