Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p67970 Brassica napus
A10p02640 Brassica napus
Aa31LG1G20620 Aethionema arabicum
Actinidia04506 Actinidia chinensis
Actinidia40113 Actinidia chinensis
Ah.13g071800 Amaranthus hybridus
AL1G13810 Arabidopsis lyrata
Aqoxy2G03471 Aquilegia oxysepala
Aqoxy7G01427 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea
AT1G04210 Arabidopsis thaliana
ATR0665G133 Amborella trichopoda
Atru.chr4.2330 Acer truncatum
Atru.chr4.2331 Acer truncatum
AUR62038647 Chenopodium quinoa
AUR62042985 Chenopodium quinoa
BcaC05g24461 Brassica carinata
BcaC05g24463 Brassica carinata
BcaC07g42199 Brassica carinata
BolC5t29021H Brassica oleracea
BolC8t52768H Brassica oleracea
BraA09t42132Z Brassica rapa
BraA10t42531Z Brassica rapa
C05p02420 Brassica napus
C08p52390 Brassica napus
CAN.G1435.8 Capsicum annuum
CAN.G381.4 Capsicum annuum
CANSAT78G0708 Cannabis sativa
CARHR003540 Cardamine hirsuta
Carub.0001s0340 Capsella rubella
Ca_20830_v3 Cicer arietinum L.
CBR_g34713 Chara braunii
Cc03_g04360 Coffea canephora
CDE06G0929 Ceratophyllum demersum
CDE07G0263 Ceratophyllum demersum
Cfa008428 Carpinus fangiana
Ciclev10004189m.g Citrus clementina
CiPaw.01G194700 Carya illinoinensis
ClCG05G004810 Citrullus lanatus
COL.COLO4_21575 Corchorus olitorius
Cpa.g.sc44.129 Carica papaya
CsaV3_3G012850 Cucumis sativus L.
CSS0040136 Camellia sinensis var. sinensis
DCAR_024187 Daucus carota
Dinv14050 Davidia involucrata
Dinv44581 Davidia involucrata
Duzib151G0659 Durio zibethinus
ECA234G3873 Erigeron canadensis
EL10Ac3g06528 Beta vulgaris
Eucgr.B00983 Eucalyptus grandis
FAN07G2222 Fragaria x ananassa
FAN12G2122 Fragaria x ananassa
FAN12G3612 Fragaria x ananassa
FAN12G3630 Fragaria x ananassa
FAN17G0232 Fragaria x ananassa
FAN17G0661 Fragaria x ananassa
FAN22G0929 Fragaria x ananassa
FAN22G1518 Fragaria x ananassa
FvH4_1g18400 Fragaria vesca
FvH4_1g24542 Fragaria vesca
FvH4_4g01620 Fragaria vesca
FvH4_4g29700 Fragaria vesca
Glyma.03G105601 Glycine max
Glyma.10G111500 Glycine max
Glyma.10G243000 Glycine max
Glyma.14G105001 Glycine max
Glyma.20G151300 Glycine max
Gohir.A10G117700 Gossypium hirsutum
Gohir.D10G149100 Gossypium hirsutum
Gorai.011G166400 Gossypium raimondii
GSVIVG01018052001 Vitis vinifera
HanXRQChr10g0294771 Helianthus annuus
Haze_11239 Corylus avellana
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla
HPP92_023539 Vanilla planifolia
HPP92_023540 Vanilla planifolia
Hund20642 Selenicereus undatus
Lalb_Chr02g0140731 Lupinus albus
Lj3C724G8 Lonicera japonica
Lj5g0008006 Lotus japonicus
Lsat_1_v5_gn_1_72981 Lactuca sativa
Lsat_1_v5_gn_5_103320 Lactuca sativa
Lsat_1_v5_gn_5_169081 Lactuca sativa
Manes.15G033300 Manihot esculenta
Mapoly0005s0269 Marchantia polymorpha
MBI11_g37065_MAGBIO Magnolia biondii
MD13G1201100 Malus domestica
MD16G1200600 Malus domestica
Medtr4g068740 Medicago truncatula
MELO3C006495.2 Cucumis melo
Migut.N00215 Erythranthe guttata
MSTRG.4066 Avicennia marina
Nitab4.5_0000224g0010 Nicotiana tabacum
Nitab4.5_0002652g0030 Nicotiana tabacum
Nn6g34173 Nelumbo nucifera
Oeu064241.3 Olea europaea
Os03g0744300 Oryza sativa ssp. japonica
Peaxi162Scf00316g00026 Petunia axillaris
PGR142G3885 Punica granatum
PGSC0003DMG400030169 Solanum tuberosum
Phvul.007G062700 Phaseolus vulgaris
Potri.008G158600 Populus trichocarpa
Potri.010G081400 Populus trichocarpa
Pp3c8_22390 Physcomitrium patens
Prupe.1G022600 Prunus persica
Psat7g206760 Pisum sativum
PSO210G2132 Papaver somniferum
PSO461G0024 Papaver somniferum
QL06p000822 Quercus lobata
RcHm_v2.0_Chr4g0388191 Rosa chinensis
RcHm_v2.0_Chr4g0437941 Rosa chinensis
Rhsim04G0196700 Rhododendron simsii
Sabra08G0120900 Salix brachista
Sabra10G0061500 Salix brachista
Sc13g0004790 Simmondsia chinensis
Sed0001129 Sechium edule
SEGI_02681 Sequoiadendron giganteum
SEGI_05896 Sequoiadendron giganteum
SEGI_10965 Sequoiadendron giganteum
SEGI_23993 Sequoiadendron giganteum
SEGI_30385 Sequoiadendron giganteum
SEGI_35525 Sequoiadendron giganteum
SEGI_39228 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01030 Striga asiatica
SGA_v2.0_scaffold79G25602 Striga asiatica
SHI00542 Sapria himalayana
SHI01996 Sapria himalayana
SHI07929 Sapria himalayana
SHI07930 Sapria himalayana
SHI23050 Sapria himalayana
SHI23426 Sapria himalayana
SHI24701 Sapria himalayana
SHI28614 Sapria himalayana
SHI29095 Sapria himalayana
SHI30650 Sapria himalayana
SHI31207 Sapria himalayana
SHI34261 Sapria himalayana
SMO118G0545 Selaginella moellendorffii
Solyc09g082800.3 Solanum lycopersicum
Sopen09g031650 Solanum pennellii
Sp1g03030 Schrenkiella parvula
TAR362G0583 Trochodendron aralioides
TAR633G0587 Trochodendron aralioides
THA.LOC104826066 Tarenaya hassleriana
Thecc.04G239700 Theobroma cacao
Thecc.08G085900 Theobroma cacao
Thhalv10000396m.g Eutrema salsugineum
Thhalv10006614m.g Eutrema salsugineum
TPR.G29898 Trifolium pratense
TWI73G0280 Tripterygium wilfordii
vmacro08381 Vaccinium macrocarpon
VMungo0720G1744 Vigna mungo
Zm00001eb004230 Zea mays
Zm00001eb056920 Zea mays
Zm00001eb116710 Zea mays

User provided reference genes

Program Settings