Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05010 Brassica napus
A03p08950 Brassica napus
A10p20980 Brassica napus
Aa31LG11G11040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5538 Anthoceros agrestis
Actinidia01943 Actinidia chinensis
Actinidia40243 Actinidia chinensis
Ah.13g074560 Amaranthus hybridus
AL6G29850 Arabidopsis lyrata
Aqoxy2G03072 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7AW5Q0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8N8UE Arachis hypogaea
AT5G18580 Arabidopsis thaliana
ATR0222G012 Amborella trichopoda
ATR0706G153 Amborella trichopoda
ATR0706G214 Amborella trichopoda
Atru.chr4.2787 Acer truncatum
AUR62041198 Chenopodium quinoa
AUR62043784 Chenopodium quinoa
BcaB01g05264 Brassica carinata
BcaB05g23341 Brassica carinata
BcaB08g36661 Brassica carinata
BcaC03g13610 Brassica carinata
BcaC04g18665 Brassica carinata
BolC2t06906H Brassica oleracea
BolC3t13524H Brassica oleracea
BolC9t58658H Brassica oleracea
BraA02t05460Z Brassica rapa
BraA03t10221Z Brassica rapa
BraA10t44163Z Brassica rapa
C02p10040 Brassica napus
C03p10420 Brassica napus
C09p57910 Brassica napus
CAN.G580.3 Capsicum annuum
CANSAT78G2472 Cannabis sativa
CARHR194440 Cardamine hirsuta
Carub.0006s1686 Capsella rubella
Ca_21537_v3 Cicer arietinum L.
CBR_g7999 Chara braunii
Cc03_g02140 Coffea canephora
CDE12G0904 Ceratophyllum demersum
Ciclev10005060m.g Citrus clementina
CiPaw.02G085000 Carya illinoinensis
ClCG05G005920 Citrullus lanatus
COL.COLO4_13908 Corchorus olitorius
Cpa.g.sc16.134 Carica papaya
Cpa.g.sc16.135 Carica papaya
Cre01.g047900 Chlamydomonas reinhardtii
CsaV3_3G014300 Cucumis sativus L.
CSS0009969 Camellia sinensis var. sinensis
CSS0050493 Camellia sinensis var. sinensis
DCAR_002452 Daucus carota
DCAR_002455 Daucus carota
DCAR_002457 Daucus carota
Dinv38310 Davidia involucrata
Dinv44407 Davidia involucrata
Duzib052G0124 Durio zibethinus
Duzib151G0997 Durio zibethinus
ECA240G1474 Erigeron canadensis
ECA246G1561 Erigeron canadensis
EL10Ac3g06572 Beta vulgaris
Eucgr.H03866 Eucalyptus grandis
FAN07G0597 Fragaria x ananassa
FAN12G0549 Fragaria x ananassa
FAN12G3150 Fragaria x ananassa
FAN17G1172 Fragaria x ananassa
FvH4_4g17580 Fragaria vesca
Glyma.07G250200 Glycine max
Glyma.17G024200 Glycine max
Gohir.A09G240300 Gossypium hirsutum
Gohir.A10G161800 Gossypium hirsutum
Gohir.D09G241050 Gossypium hirsutum
Gohir.D10G168300 Gossypium hirsutum
Gorai.006G264500 Gossypium raimondii
Gorai.011G187900 Gossypium raimondii
GSVIVG01017781001 Vitis vinifera
HanXRQChr03g0080861 Helianthus annuus
HanXRQChr06g0174301 Helianthus annuus
HanXRQChr12g0380821 Helianthus annuus
Haze_01244 Corylus avellana
Hma1.2p1_0698F.1_g205415 Hydrangea macrophylla
HPP92_016927 Vanilla planifolia
Hund20576 Selenicereus undatus
Lalb_Chr13g0303761 Lupinus albus
Lj3A813T31 Lonicera japonica
Lj4g0005644 Lotus japonicus
Lj4g0023442 Lotus japonicus
LjContig00272g0007918 Lotus japonicus
Lsat_1_v5_gn_1_116641 Lactuca sativa
Lsat_1_v5_gn_1_49901 Lactuca sativa
Lsat_1_v5_gn_2_7960 Lactuca sativa
Lsat_1_v5_gn_3_27301 Lactuca sativa
Lsat_1_v5_gn_5_3641 Lactuca sativa
Lsat_1_v5_gn_5_52860 Lactuca sativa
Manes.03G192300 Manihot esculenta
Manes.07G083301 Manihot esculenta
Manes.15G015000 Manihot esculenta
Mapoly0035s0147 Marchantia polymorpha
MBI18_g01976_MAGBIO Magnolia biondii
MCO11G522 Micromonas commoda
MD13G1171500 Malus domestica
MD16G1173200 Malus domestica
Medtr4g119230 Medicago truncatula
MELO3C006623.2 Cucumis melo
Migut.N01937 Erythranthe guttata
MSTRG.28019 Avicennia marina
Nitab4.5_0000644g0140 Nicotiana tabacum
Nn1g02294 Nelumbo nucifera
Nn1g02295 Nelumbo nucifera
Nn1g09549 Nelumbo nucifera
Nn3g21355 Nelumbo nucifera
Nn4g25961 Nelumbo nucifera
Oeu044779.2 Olea europaea
Oeu062899.1 Olea europaea
Os05g0149800 Oryza sativa ssp. japonica
Peaxi162Scf00386g00533 Petunia axillaris
PGR004G2200 Punica granatum
Phvul.003G102400 Phaseolus vulgaris
Potri.008G215300 Populus trichocarpa
Potri.010G022300 Populus trichocarpa
Pp3c5_23420 Physcomitrium patens
Pp3c6_6290 Physcomitrium patens
PRCOL_00004048 Prasinoderma coloniale
Prupe.1G140000 Prunus persica
Psat4g047160 Pisum sativum
Psat4g047200 Pisum sativum
PSO210G4745 Papaver somniferum
PSO832G1860 Papaver somniferum
QL06p007990 Quercus lobata
RcHm_v2.0_Chr4g0421481 Rosa chinensis
Rhsim04G0218600 Rhododendron simsii
Sabra08G0155500 Salix brachista
SalBow3G4019 Salvia bowleyana
Sc25g0004740 Simmondsia chinensis
Sed0000507 Sechium edule
SEGI_19336 Sequoiadendron giganteum
SEGI_41070 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16263 Striga asiatica
SMO118G0294 Selaginella moellendorffii
Solyc01g067500.3 Solanum lycopersicum
Sopen01g029430 Solanum pennellii
Sp6g25750 Schrenkiella parvula
TAR365G0597 Trochodendron aralioides
TAR636G0963 Trochodendron aralioides
THA.LOC104818847 Tarenaya hassleriana
Thecc.04G279900 Theobroma cacao
Thhalv10013373m.g Eutrema salsugineum
TPR.G14635 Trifolium pratense
TWI09G1039 Tripterygium wilfordii
TWI53G0054 Tripterygium wilfordii
TWI53G1348 Tripterygium wilfordii
unitig_578.g16759 Utricularia gibba
vmacro08109 Vaccinium macrocarpon
VMungo1215G2997 Vigna mungo
Zm00001eb083940 Zea mays
Zm00001eb308510 Zea mays
Zm00001eb354190 Zea mays
Zm00001eb418170 Zea mays

User provided reference genes

Program Settings