Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25930 Brassica napus
A05p00540 Brassica napus
A10p01300 Brassica napus
Aa31LG10G16310 Aethionema arabicum
Aa31LG1G9960 Aethionema arabicum
Actinidia17904 Actinidia chinensis
Actinidia25853 Actinidia chinensis
AL1G11900 Arabidopsis lyrata
AL251U10010 Arabidopsis lyrata
AL4G46920 Arabidopsis lyrata
AL5G45160 Arabidopsis lyrata
Aqoxy5G02551 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3K3C0B Arachis hypogaea
AT1G02570 Arabidopsis thaliana
AT1G02575 Arabidopsis thaliana
AT2G47360 Arabidopsis thaliana
ATR0763G289 Amborella trichopoda
Atru.chr5.984 Acer truncatum
BcaB01g03170 Brassica carinata
BcaB02g08783 Brassica carinata
BcaB03g15770 Brassica carinata
BcaB06g29451 Brassica carinata
BcaC01g05033 Brassica carinata
BcaC02g06968 Brassica carinata
BcaC02g09006 Brassica carinata
BcaC02g12568 Brassica carinata
BolC3t15444H Brassica oleracea
BolC4t21692H Brassica oleracea
BolC4t25517H Brassica oleracea
BolC4t28754H Brassica oleracea
BolC5t28912H Brassica oleracea
BraA03t11810Z Brassica rapa
BraA05t19052Z Brassica rapa
BraA10t42408Z Brassica rapa
C03p30930 Brassica napus
C04p00580 Brassica napus
C04p39520 Brassica napus
C04p72730 Brassica napus
C05p01300 Brassica napus
CANSAT25G1025 Cannabis sativa
CANSAT25G2756 Cannabis sativa
CARHR001880 Cardamine hirsuta
CARHR142760 Cardamine hirsuta
Carub.0001s0163 Capsella rubella
Carub.0004s3008 Capsella rubella
Ca_10279_v3 Cicer arietinum L.
Cc01_g21490 Coffea canephora
Cfa005786 Carpinus fangiana
Ciclev10021487m.g Citrus clementina
CiPaw.07G118100 Carya illinoinensis
CiPaw.07G118200 Carya illinoinensis
CiPaw.08G089200 Carya illinoinensis
ClCG09G005050 Citrullus lanatus
ClCG10G011450 Citrullus lanatus
COL.COLO4_23224 Corchorus olitorius
Cpa.g.sc18.55 Carica papaya
CsaV3_7G030000 Cucumis sativus L.
DCAR_002892 Daucus carota
DCAR_012338 Daucus carota
DCAR_018295 Daucus carota
Dinv10105 Davidia involucrata
Dinv10107 Davidia involucrata
Dinv33123 Davidia involucrata
Duzib133G0018 Durio zibethinus
EL10As5g23540 Beta vulgaris
Eucgr.H01008 Eucalyptus grandis
Eucgr.K03548 Eucalyptus grandis
Eucgr.L03092 Eucalyptus grandis
FAN04G1151 Fragaria x ananassa
FAN08G1928 Fragaria x ananassa
FAN13G0862 Fragaria x ananassa
FAN18G0138 Fragaria x ananassa
FAN18G0760 Fragaria x ananassa
FAN18G1107 Fragaria x ananassa
Glyma.02G011900 Glycine max
Glyma.03G220000 Glycine max
Glyma.10G012400 Glycine max
Glyma.19G216900 Glycine max
Gohir.A08G040600 Gossypium hirsutum
Gohir.A11G109250 Gossypium hirsutum
Gohir.D08G050700 Gossypium hirsutum
Gohir.D11G113800 Gossypium hirsutum
Gorai.004G050300 Gossypium raimondii
Gorai.007G122400 Gossypium raimondii
HanXRQChr10g0285241 Helianthus annuus
Haze_05055 Corylus avellana
Hma1.2p1_0408F.1_g146640 Hydrangea macrophylla
HPP92_001238 Vanilla planifolia
Lalb_Chr02g0146851 Lupinus albus
Lalb_Chr21g0309621 Lupinus albus
Lj1C16T8 Lonicera japonica
Lj1g0007921 Lotus japonicus
Lj5g0007000 Lotus japonicus
Lsat_1_v5_gn_9_2700 Lactuca sativa
Manes.01G228400 Manihot esculenta
Manes.05G004200 Manihot esculenta
MBI19_g07230_MAGBIO Magnolia biondii
MD03G1293400 Malus domestica
MD03G1293600 Malus domestica
Medtr1g086950 Medicago truncatula
Medtr7g109590 Medicago truncatula
MELO3C015920.2 Cucumis melo
Migut.N00771 Erythranthe guttata
Migut.N00928 Erythranthe guttata
Nitab4.5_0000363g0250 Nicotiana tabacum
Nitab4.5_0003540g0150 Nicotiana tabacum
Nitab4.5_0007087g0030 Nicotiana tabacum
Nitab4.5_0007407g0080 Nicotiana tabacum
Nn4g25589 Nelumbo nucifera
Oeu008476.1 Olea europaea
Oeu043737.1 Olea europaea
Peaxi162Scf00058g02629 Petunia axillaris
Peaxi162Scf00691g00043 Petunia axillaris
PGR044G0990 Punica granatum
PGR083G0375 Punica granatum
PGSC0003DMG400007284 Solanum tuberosum
Phvul.001G213500 Phaseolus vulgaris
Phvul.007G213800 Phaseolus vulgaris
Potri.002G195400 Populus trichocarpa
Potri.014G119900 Populus trichocarpa
Prupe.8G266000 Prunus persica
Psat3g019440 Pisum sativum
Psat6g161400 Pisum sativum
PSO210G1746 Papaver somniferum
PSO210G2446 Papaver somniferum
PSO223G0035 Papaver somniferum
PSO761G0256 Papaver somniferum
QL12p019662 Quercus lobata
RcHm_v2.0_Chr7g0241031 Rosa chinensis
RcHm_v2.0_Chr7g0241061 Rosa chinensis
Sabra02G0161400 Salix brachista
Sabra14G0088900 Salix brachista
SalBow2G1668 Salvia bowleyana
SalBow3G0071 Salvia bowleyana
SalBow3G0261 Salvia bowleyana
SalBow3G0439 Salvia bowleyana
Sed0006535 Sechium edule
Sed0021092 Sechium edule
SGA_v2.0_scaffold198G41121 Striga asiatica
Solyc01g079370.4 Solanum lycopersicum
Solyc06g009610.1 Solanum lycopersicum
Sopen01g031150 Solanum pennellii
Sopen06g004240 Solanum pennellii
Sp1g01590 Schrenkiella parvula
Sp4g29300 Schrenkiella parvula
THA.LOC104801571 Tarenaya hassleriana
THA.LOC104802151 Tarenaya hassleriana
THA.LOC104815920 Tarenaya hassleriana
THA.LOC104825938 Tarenaya hassleriana
Thecc.01G314300 Theobroma cacao
Thhalv10001759m.g Eutrema salsugineum
Thhalv10009368m.g Eutrema salsugineum
TPR.G38694 Trifolium pratense
TPR.G4132 Trifolium pratense
TWI75G0806 Tripterygium wilfordii
vmacro02401 Vaccinium macrocarpon
VMungo0720G1332 Vigna mungo
VMungo1383G1848 Vigna mungo

User provided reference genes

Program Settings