Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00800 Brassica napus
A10p26640 Brassica napus
Aa31LG3G16090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2737 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis
Actinidia14103 Actinidia chinensis
Actinidia23085 Actinidia chinensis
Ah.16g104820 Amaranthus hybridus
AL6G21660 Arabidopsis lyrata
Aqoxy7G03529 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3DY4JU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6PY749 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6TA6W9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2IMN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X695T9 Arachis hypogaea
AT5G11040 Arabidopsis thaliana
ATR0629G049 Amborella trichopoda
Atru.chr7.2501 Acer truncatum
Atru.chr7.2502 Acer truncatum
AUR62012448 Chenopodium quinoa
AUR62031571 Chenopodium quinoa
BcaC03g13345 Brassica carinata
BcaC03g13346 Brassica carinata
BcaC04g19264 Brassica carinata
BolC2t06439H Brassica oleracea
BolC9t59402H Brassica oleracea
BraA10t44722Z Brassica rapa
C02p04820 Brassica napus
C09p65810 Brassica napus
CAN.G199.72 Capsicum annuum
CANSAT11G1771 Cannabis sativa
CARHR202250 Cardamine hirsuta
Carub.0006s0955 Capsella rubella
Ca_13043_v3 Cicer arietinum L.
CBR_g36903 Chara braunii
Cc00_g21220 Coffea canephora
Cc08_g00190 Coffea canephora
CDE05G2463 Ceratophyllum demersum
Cfa013100 Carpinus fangiana
Ciclev10007276m.g Citrus clementina
CiPaw.08G008300 Carya illinoinensis
ClCG05G016580 Citrullus lanatus
COL.COLO4_18916 Corchorus olitorius
Cpa.g.sc187.28 Carica papaya
Cpa.g.sc187.29 Carica papaya
Cre07.g316100 Chlamydomonas reinhardtii
CsaV3_4G036860 Cucumis sativus L.
CSS0038938 Camellia sinensis var. sinensis
CSS0039966 Camellia sinensis var. sinensis
DCAR_021911 Daucus carota
Dinv03411 Davidia involucrata
Dinv28429 Davidia involucrata
Duzib150G1268 Durio zibethinus
ECA246G2532 Erigeron canadensis
ECA248G0813 Erigeron canadensis
EL10Ac2g04152 Beta vulgaris
Eucgr.C02726 Eucalyptus grandis
FAN15G2875 Fragaria x ananassa
FAN20G1713 Fragaria x ananassa
FAN24G2656 Fragaria x ananassa
FAN27G1181 Fragaria x ananassa
FvH4_2g28290 Fragaria vesca
Glyma.14G112200 Glycine max
Glyma.17G215700 Glycine max
Gohir.A06G100000 Gossypium hirsutum
Gohir.A07G030400 Gossypium hirsutum
Gohir.D06G102200 Gossypium hirsutum
Gohir.D07G034250 Gossypium hirsutum
Gohir.D07G034300 Gossypium hirsutum
Gorai.001G035900 Gossypium raimondii
Gorai.010G117200 Gossypium raimondii
GSVIVG01035919001 Vitis vinifera
GSVIVG01037947001 Vitis vinifera
HanXRQChr01g0030641 Helianthus annuus
HanXRQChr16g0511131 Helianthus annuus
Haze_21457 Corylus avellana
Hma1.2p1_0167F.1_g073630 Hydrangea macrophylla
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla
HPP92_020311 Vanilla planifolia
HPP92_020312 Vanilla planifolia
HPP92_024788 Vanilla planifolia
HPP92_024789 Vanilla planifolia
HPP92_024790 Vanilla planifolia
HPP92_029048 Vanilla planifolia
Hund04463 Selenicereus undatus
Lalb_Chr11g0075481 Lupinus albus
Lj5g0022357 Lotus japonicus
Lj8A732G29 Lonicera japonica
Lsat_1_v5_gn_1_43861 Lactuca sativa
Lsat_1_v5_gn_6_115440 Lactuca sativa
Manes.03G011700 Manihot esculenta
Manes.16G126200 Manihot esculenta
Mapoly0001s0490 Marchantia polymorpha
MD08G1153900 Malus domestica
MD15G1131100 Malus domestica
Medtr1g012980 Medicago truncatula
Medtr7g069440 Medicago truncatula
MELO3C016987.2 Cucumis melo
Migut.E01823 Erythranthe guttata
MSTRG.1735 Avicennia marina
Nitab4.5_0002503g0050 Nicotiana tabacum
Nitab4.5_0003811g0060 Nicotiana tabacum
Nn2g12251 Nelumbo nucifera
Nn2g16054 Nelumbo nucifera
Nn4g24965 Nelumbo nucifera
Nn8g39722 Nelumbo nucifera
Oeu056766.2 Olea europaea
Os04g0502200 Oryza sativa ssp. japonica
Peaxi162Scf00430g00220 Petunia axillaris
PGR044G0530 Punica granatum
Phvul.001G047300 Phaseolus vulgaris
Potri.006G259500 Populus trichocarpa
Potri.018G022500 Populus trichocarpa
Pp3c19_10170 Physcomitrium patens
Pp3c22_21520 Physcomitrium patens
Prupe.1G486400 Prunus persica
Psat6g028520 Pisum sativum
PSO210G3160 Papaver somniferum
QL02p020149 Quercus lobata
RcHm_v2.0_Chr2g0096161 Rosa chinensis
RcHm_v2.0_Chr6g0297201 Rosa chinensis
RhsimUnG0052600 Rhododendron simsii
RhsimUnG0165300 Rhododendron simsii
Sc23g0006530 Simmondsia chinensis
Sed0004204 Sechium edule
SEGI_04045 Sequoiadendron giganteum
SEGI_21363 Sequoiadendron giganteum
SEGI_40067 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26586 Striga asiatica
SMO164G0067 Selaginella moellendorffii
SMO199G0047 Selaginella moellendorffii
SMO361G0208 Selaginella moellendorffii
SMO361G0808 Selaginella moellendorffii
SMO364G0672 Selaginella moellendorffii
SMO364G0797 Selaginella moellendorffii
Solyc06g065840.3 Solanum lycopersicum
Sopen06g024330 Solanum pennellii
Sp3g28070 Schrenkiella parvula
Sp6g32450 Schrenkiella parvula
TAR383G0245 Trochodendron aralioides
TAR383G0934 Trochodendron aralioides
THA.LOC104799036 Tarenaya hassleriana
Thecc.09G019500 Theobroma cacao
Thhalv10012483m.g Eutrema salsugineum
TPR.G38909 Trifolium pratense
TPR.G38939 Trifolium pratense
TPR.G40835 Trifolium pratense
TWI34G0107 Tripterygium wilfordii
TWI63G0229 Tripterygium wilfordii
unitig_32.g11112 Utricularia gibba
unitig_32.g11113 Utricularia gibba
vmacro22576 Vaccinium macrocarpon
VMungo0647G1846 Vigna mungo
Zm00001eb078140 Zea mays
Zm00001eb426000 Zea mays
Zm00001eb426010 Zea mays

User provided reference genes

Program Settings