Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p30670 Brassica napus
A08p03610 Brassica napus
A08p04010 Brassica napus
Aa31LG10G4590 Aethionema arabicum
Aa31LG8G5720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.494 Anthoceros agrestis
Actinidia29985 Actinidia chinensis
Actinidia38537 Actinidia chinensis
Ah.07g207540 Amaranthus hybridus
AL1G56520 Arabidopsis lyrata
AL1G56550 Arabidopsis lyrata
AL3G32270 Arabidopsis lyrata
Aqoxy7G03968 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2BL1F5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7DYL36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7K7KM4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8LR1I7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HQTU6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NYKS2B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S62CMW Arachis hypogaea
AT1G49400 Arabidopsis thaliana
AT3G18880 Arabidopsis thaliana
ATR0626G376 Amborella trichopoda
Atru.chr8.1086 Acer truncatum
Atru.chr8.89 Acer truncatum
AUR62001361 Chenopodium quinoa
AUR62002237 Chenopodium quinoa
AUR62015449 Chenopodium quinoa
BcaB04g17345 Brassica carinata
BcaB06g25942 Brassica carinata
BcaC07g37057 Brassica carinata
BcaNung06952 Brassica carinata
BolC5t33384H Brassica oleracea
BolC8t47225H Brassica oleracea
BraA05t21909Z Brassica rapa
BraA08t32393Z Brassica rapa
BraA08t32429Z Brassica rapa
C05p46550 Brassica napus
C08p04210 Brassica napus
CARHR039400 Cardamine hirsuta
Carub.0001s3858 Capsella rubella
Ca_10717_v3 Cicer arietinum L.
Ca_20351_v3 Cicer arietinum L.
CBR_g18728 Chara braunii
Cc06_g23660 Coffea canephora
CDE04G0148 Ceratophyllum demersum
Ciclev10006280m.g Citrus clementina
Ciclev10009986m.g Citrus clementina
CiPaw.01G111800 Carya illinoinensis
ClCG07G006010 Citrullus lanatus
COL.COLO4_31171 Corchorus olitorius
Cpa.g.sc91.70 Carica papaya
Cre02.g118950 Chlamydomonas reinhardtii
Cre07.g337800 Chlamydomonas reinhardtii
CsaV3_4G009740 Cucumis sativus L.
CSS0016928 Camellia sinensis var. sinensis
CSS0028506 Camellia sinensis var. sinensis
DCAR_013469 Daucus carota
Dinv12627 Davidia involucrata
Dinv31498 Davidia involucrata
Duzib248G0295 Durio zibethinus
ECA238G1741 Erigeron canadensis
FAN04G2398 Fragaria x ananassa
FAN04G2743 Fragaria x ananassa
FAN05G0480 Fragaria x ananassa
FAN08G2577 Fragaria x ananassa
FAN09G1784 Fragaria x ananassa
FAN13G2885 Fragaria x ananassa
FAN14G2878 Fragaria x ananassa
FAN18G1354 Fragaria x ananassa
FvH4_5g34540 Fragaria vesca
Glyma.01G125100 Glycine max
Glyma.07G155900 Glycine max
Glyma.18G206300 Glycine max
Gohir.A05G279932 Gossypium hirsutum
Gohir.D05G281600 Gossypium hirsutum
Gorai.009G295100 Gossypium raimondii
GSVIVG01034226001 Vitis vinifera
GSVIVG01034243001 Vitis vinifera
HanXRQChr06g0184041 Helianthus annuus
Hma1.2p1_0391F.1_g142890 Hydrangea macrophylla
HPP92_001963 Vanilla planifolia
Hund04573 Selenicereus undatus
Hund11851 Selenicereus undatus
Lalb_Chr02g0150391 Lupinus albus
Lalb_Chr06g0169291 Lupinus albus
Lj4g0014219 Lotus japonicus
Lsat_1_v5_gn_4_185681 Lactuca sativa
Manes.01G180900 Manihot esculenta
Manes.03G098816 Manihot esculenta
Mapoly0128s0026 Marchantia polymorpha
MBI13_g33575_MAGBIO Magnolia biondii
MCO14G513 Micromonas commoda
MD03G1139600 Malus domestica
MD11G1162200 Malus domestica
Medtr4g014360 Medicago truncatula
Medtr6g005030 Medicago truncatula
MELO3C026421.2 Cucumis melo
Migut.J00858 Erythranthe guttata
MSTRG.19411 Avicennia marina
Nitab4.5_0000073g0450 Nicotiana tabacum
Nitab4.5_0000170g0150 Nicotiana tabacum
Nitab4.5_0004827g0050 Nicotiana tabacum
Nn5g26959 Nelumbo nucifera
Oeu008630.1 Olea europaea
Oeu036964.1 Olea europaea
Os08g0359600 Oryza sativa ssp. japonica
Peaxi162Scf00474g00216 Petunia axillaris
PGR044G1699 Punica granatum
PGSC0003DMG400002922 Solanum tuberosum
PGSC0003DMG400002924 Solanum tuberosum
Phvul.008G093100 Phaseolus vulgaris
Potri.006G080200 Populus trichocarpa
Potri.018G150100 Populus trichocarpa
Pp3c1_39230 Physcomitrium patens
PRCOL_00003156 Prasinoderma coloniale
Prupe.1G001800 Prunus persica
Prupe.6G124600 Prunus persica
Psat0s11495g0040 Pisum sativum
Psat0s5319g0080 Pisum sativum
Psat0s5319g0120 Pisum sativum
Psat0s5319g0200 Pisum sativum
Psat2g183080 Pisum sativum
Psat2g183160 Pisum sativum
Psat7g249240 Pisum sativum
PSO170G5232 Papaver somniferum
PSO407G0251 Papaver somniferum
QL11p006982 Quercus lobata
RcHm_v2.0_Chr7g0235191 Rosa chinensis
Rhsim01G0103600 Rhododendron simsii
RhsimUnG0238800 Rhododendron simsii
Sabra06G0060700 Salix brachista
SalBow6G0192 Salvia bowleyana
Sc15g0007280 Simmondsia chinensis
Sed0013564 Sechium edule
SEGI_30295 Sequoiadendron giganteum
SEGI_39311 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09593 Striga asiatica
SGA_v2.0_scaffold272G46369 Striga asiatica
SMO230G0073 Selaginella moellendorffii
Solyc12g009380.2 Solanum lycopersicum
Sopen12g004370 Solanum pennellii
Sp1g36240 Schrenkiella parvula
Sp3g16980 Schrenkiella parvula
TAR383G0700 Trochodendron aralioides
TAR626G1307 Trochodendron aralioides
THA.LOC104798808 Tarenaya hassleriana
THA.LOC104800355 Tarenaya hassleriana
Thecc.02G231300 Theobroma cacao
Thhalv10011874m.g Eutrema salsugineum
Thhalv10021804m.g Eutrema salsugineum
TPR.G5271 Trifolium pratense
TWI53G1560 Tripterygium wilfordii
TWI74G0566 Tripterygium wilfordii
vmacro20736 Vaccinium macrocarpon
VMungo1383G1103 Vigna mungo
Zm00001eb041040 Zea mays
Zm00001eb176930 Zea mays

User provided reference genes

Program Settings