Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10000 Brassica napus
A02p30170 Brassica napus
A06p45800 Brassica napus
Aa31LG6G710 Aethionema arabicum
Aa31LG9G6270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis
Actinidia03381 Actinidia chinensis
Actinidia03382 Actinidia chinensis
Actinidia09217 Actinidia chinensis
Actinidia14814 Actinidia chinensis
Actinidia25956 Actinidia chinensis
Ah.07g200250 Amaranthus hybridus
Ah.12g054920 Amaranthus hybridus
AL7G30750 Arabidopsis lyrata
AL7G36550 Arabidopsis lyrata
AL8G11720 Arabidopsis lyrata
Aqoxy3G02401 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea
AT4G17960 Arabidopsis thaliana
AT5G46620 Arabidopsis thaliana
ATR0049G023 Amborella trichopoda
Atru.chr6.1737 Acer truncatum
AUR62007272 Chenopodium quinoa
AUR62018727 Chenopodium quinoa
BcaC03g16867 Brassica carinata
BcaC06g31462 Brassica carinata
BcaC06g34365 Brassica carinata
BcaC09g51581 Brassica carinata
BcaNung00040 Brassica carinata
BolC1t01142H Brassica oleracea
BolC2t10800H Brassica oleracea
BolC7t43533H Brassica oleracea
BraA01t00944Z Brassica rapa
BraA02t08033Z Brassica rapa
BraA06t27449Z Brassica rapa
C01p11800 Brassica napus
C02p47640 Brassica napus
C07p29850 Brassica napus
CAN.G1659.7 Capsicum annuum
CAN.G201.22 Capsicum annuum
CANSAT21G0306 Cannabis sativa
CARHR174890 Cardamine hirsuta
CARHR224700 Cardamine hirsuta
Carub.0007s2338 Capsella rubella
Carub.0008s0129 Capsella rubella
Cc08_g02530 Coffea canephora
CDE12G0528 Ceratophyllum demersum
Cfa012420 Carpinus fangiana
Cfa012421 Carpinus fangiana
Ciclev10033624m.g Citrus clementina
Ciclev10033884m.g Citrus clementina
CiPaw.11G092100 Carya illinoinensis
CiPaw.12G062400 Carya illinoinensis
ClCG09G012070 Citrullus lanatus
COL.COLO4_17061 Corchorus olitorius
Cpa.g.sc90.47 Carica papaya
Cpa.g.sc90.49 Carica papaya
CsaV3_3G049300 Cucumis sativus L.
CSS0021945 Camellia sinensis var. sinensis
CSS0032807 Camellia sinensis var. sinensis
DCAR_008278 Daucus carota
Dinv21787 Davidia involucrata
Dinv25204 Davidia involucrata
Dinv28943 Davidia involucrata
Duzib068G1306 Durio zibethinus
Duzib205G0684 Durio zibethinus
ECA233G1850 Erigeron canadensis
ECA240G1087 Erigeron canadensis
EL10Ac5g12139 Beta vulgaris
Eucgr.E00288 Eucalyptus grandis
FAN04G0466 Fragaria x ananassa
FAN08G2253 Fragaria x ananassa
FAN13G1185 Fragaria x ananassa
FAN18G4447 Fragaria x ananassa
FvH4_5g21840 Fragaria vesca
Glyma.01G199100 Glycine max
Glyma.11G042700 Glycine max
Gohir.A08G157600 Gossypium hirsutum
Gohir.D08G177900 Gossypium hirsutum
Gorai.004G186100 Gossypium raimondii
GSVIVG01013197001 Vitis vinifera
HanXRQChr02g0043541 Helianthus annuus
Haze_08255 Corylus avellana
Haze_08256 Corylus avellana
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla
HPP92_001567 Vanilla planifolia
HPP92_001583 Vanilla planifolia
HPP92_001722 Vanilla planifolia
Hund14406 Selenicereus undatus
Lalb_Chr16g0379161 Lupinus albus
Lj2C242G4 Lonicera japonica
Lj2g0006519 Lotus japonicus
Lj8A293T23 Lonicera japonica
Lsat_1_v5_gn_6_64781 Lactuca sativa
Manes.15G168700 Manihot esculenta
Manes.17G011700 Manihot esculenta
Mapoly0066s0035 Marchantia polymorpha
MD06G1032800 Malus domestica
MD16G1276500 Malus domestica
Medtr5g014320 Medicago truncatula
MELO3C003396.2 Cucumis melo
Migut.C00969 Erythranthe guttata
MSTRG.1101 Avicennia marina
MSTRG.25306 Avicennia marina
Nitab4.5_0000256g0420 Nicotiana tabacum
Nitab4.5_0001276g0020 Nicotiana tabacum
Nitab4.5_0001276g0030 Nicotiana tabacum
Nitab4.5_0001285g0020 Nicotiana tabacum
Nitab4.5_0006066g0030 Nicotiana tabacum
Nn6g33612 Nelumbo nucifera
Oeu035388.1 Olea europaea
Os02g0128100 Oryza sativa ssp. japonica
Peaxi162Scf00460g00412 Petunia axillaris
Peaxi162Scf00615g00515 Petunia axillaris
PGR042G1036 Punica granatum
PGSC0003DMG400017533 Solanum tuberosum
PGSC0003DMG402002106 Solanum tuberosum
Phvul.002G006600 Phaseolus vulgaris
Potri.001G143600 Populus trichocarpa
Potri.003G090600 Populus trichocarpa
Pp3c10_13670 Physcomitrium patens
Pp3c4_4690 Physcomitrium patens
Prupe.5G039100 Prunus persica
Psat2g173440 Pisum sativum
PSO063G5829 Papaver somniferum
PSO782G4837 Papaver somniferum
QL12p005998 Quercus lobata
RcHm_v2.0_Chr7g0209351 Rosa chinensis
Rhsim07G0126100 Rhododendron simsii
Sabra01G0112000 Salix brachista
Sabra03G0060300 Salix brachista
Sabra19G0094000 Salix brachista
SalBow7G3710 Salvia bowleyana
Sc22g0001460 Simmondsia chinensis
Sed0004713 Sechium edule
Sed0024230 Sechium edule
SEGI_38344 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30874 Striga asiatica
SGA_v2.0_scaffold195G40785 Striga asiatica
Solyc06g061140.3 Solanum lycopersicum
Solyc08g077040.3 Solanum lycopersicum
Sopen06g021340 Solanum pennellii
Sopen08g025620 Solanum pennellii
Sp2g11450 Schrenkiella parvula
Sp7g16150 Schrenkiella parvula
TAR375G0250 Trochodendron aralioides
TAR629G0873 Trochodendron aralioides
THA.LOC104812836 Tarenaya hassleriana
Thecc.03G229700 Theobroma cacao
Thhalv10001062m.g Eutrema salsugineum
Thhalv10027517m.g Eutrema salsugineum
TPR.G7834 Trifolium pratense
TWI60G1364 Tripterygium wilfordii
TWI81G0220 Tripterygium wilfordii
vmacro14165 Vaccinium macrocarpon
Zm00001eb208820 Zea mays
Zm00001eb231030 Zea mays

User provided reference genes

Program Settings