Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27060 Brassica napus
A09p55470 Brassica napus
Aa31LG5G9840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis
Actinidia14686 Actinidia chinensis
Actinidia15745 Actinidia chinensis
Ah.10g034890 Amaranthus hybridus
AL4G17420 Arabidopsis lyrata
Aqoxy6G01950 Aquilegia oxysepala
Aqoxy6G01951 Aquilegia oxysepala
Aqoxy7G01424 Aquilegia oxysepala
Aqoxy7G03869 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJBK1K Arachis hypogaea
AT2G25740 Arabidopsis thaliana
ATR0705G143 Amborella trichopoda
Atru.chr7.2058 Acer truncatum
Atru.chr7.2059 Acer truncatum
AUR62009234 Chenopodium quinoa
AUR62041959 Chenopodium quinoa
AUR62041963 Chenopodium quinoa
BcaB08g35216 Brassica carinata
BcaC01g04904 Brassica carinata
BcaC07g40848 Brassica carinata
BolC3t15588H Brassica oleracea
BolC8t51418H Brassica oleracea
BraA03t11919Z Brassica rapa
BraA09t40949Z Brassica rapa
C03p32470 Brassica napus
C08p38460 Brassica napus
CAN.G208.65 Capsicum annuum
CANSAT25G3668 Cannabis sativa
CANSAT35G1178 Cannabis sativa
CARHR115490 Cardamine hirsuta
Carub.0004s0553 Capsella rubella
Ca_12761_v3 Cicer arietinum L.
Ca_15574_v3 Cicer arietinum L.
Ca_19225_v3 Cicer arietinum L.
CBR_g21950 Chara braunii
Cc08_g09870 Coffea canephora
CDE02G1982 Ceratophyllum demersum
CDE02G3504 Ceratophyllum demersum
Cfa013385 Carpinus fangiana
Ciclev10007949m.g Citrus clementina
CiPaw.07G202200 Carya illinoinensis
CiPaw.08G027000 Carya illinoinensis
ClCG08G012110 Citrullus lanatus
COL.COLO4_20995 Corchorus olitorius
Cpa.g.c37634 Carica papaya
Cpa.g.c46051 Carica papaya
Cpa.g.sc7.206 Carica papaya
Cre13.g585651 Chlamydomonas reinhardtii
CsaV3_2G030710 Cucumis sativus L.
CSS0042231 Camellia sinensis var. sinensis
DCAR_003076 Daucus carota
DCAR_004462 Daucus carota
Dinv23388 Davidia involucrata
Duzib150G0365 Durio zibethinus
Duzib168G1134 Durio zibethinus
ECA248G2390 Erigeron canadensis
EL10Ac2g03985 Beta vulgaris
Eucgr.C00611 Eucalyptus grandis
FAN15G2845 Fragaria x ananassa
FAN20G1421 Fragaria x ananassa
FAN27G2572 Fragaria x ananassa
FvH4_2g35320 Fragaria vesca
Glyma.04G086400 Glycine max
Glyma.06G087900 Glycine max
Gohir.A07G022241 Gossypium hirsutum
Gohir.D07G025000 Gossypium hirsutum
Gorai.001G026100 Gossypium raimondii
GSVIVG01035292001 Vitis vinifera
HanXRQChr11g0352321 Helianthus annuus
Haze_21911 Corylus avellana
Haze_21912 Corylus avellana
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla
HPP92_022971 Vanilla planifolia
HPP92_022972 Vanilla planifolia
Hund03382 Selenicereus undatus
Lalb_Chr22g0361041 Lupinus albus
Lalb_Chr23g0269711 Lupinus albus
Lj1g0018877 Lotus japonicus
Lj4g0027824 Lotus japonicus
Lj7C698G10 Lonicera japonica
Lsat_1_v5_gn_1_42160 Lactuca sativa
Manes.16G073800 Manihot esculenta
Mapoly0168s0005 Marchantia polymorpha
MBI04_g20300_MAGBIO Magnolia biondii
MBI04_g32315_MAGBIO Magnolia biondii
MBI04_g42480_MAGBIO Magnolia biondii
MCO16G603 Micromonas commoda
MD08G1111400 Malus domestica
MD15G1090900 Malus domestica
Medtr1g007160 Medicago truncatula
Medtr3g110340 Medicago truncatula
MELO3C011128.2 Cucumis melo
Migut.E01537 Erythranthe guttata
MSTRG.14029 Avicennia marina
MSTRG.1664 Avicennia marina
Nitab4.5_0001309g0070 Nicotiana tabacum
Nitab4.5_0001737g0070 Nicotiana tabacum
Nn6g35316 Nelumbo nucifera
Oeu038813.1 Olea europaea
Os01g0743600 Oryza sativa ssp. japonica
Os05g0521500 Oryza sativa ssp. japonica
Peaxi162Scf00064g01528 Petunia axillaris
PGR031G0432 Punica granatum
Phvul.009G111600 Phaseolus vulgaris
Potri.006G236400 Populus trichocarpa
Potri.018G046700 Populus trichocarpa
Pp3c15_22980 Physcomitrium patens
Pp3c16_16060 Physcomitrium patens
Pp3c27_6400 Physcomitrium patens
Pp3c5_21890 Physcomitrium patens
Pp3c5_21897 Physcomitrium patens
Pp3c6_5840 Physcomitrium patens
Pp3c9_19040 Physcomitrium patens
PRCOL_00000859 Prasinoderma coloniale
Prupe.1G445300 Prunus persica
Psat5g020600 Pisum sativum
Psat6g035200 Pisum sativum
PSO210G2011 Papaver somniferum
PSO210G3632 Papaver somniferum
QL12p041048 Quercus lobata
RcHm_v2.0_Chr6g0306601 Rosa chinensis
Rhsim02G0175400 Rhododendron simsii
Rhsim02G0175600 Rhododendron simsii
Sabra06G0184800 Salix brachista
Sabra18G0045300 Salix brachista
SalBow1G6079 Salvia bowleyana
Sc09g0009440 Simmondsia chinensis
Sed0024833 Sechium edule
SEGI_02523 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38659 Striga asiatica
SHI18791 Sapria himalayana
SMO238G0017 Selaginella moellendorffii
Solyc12g095840.2 Solanum lycopersicum
Sopen12g031740 Solanum pennellii
Sp4g05420 Schrenkiella parvula
TAR624G1263 Trochodendron aralioides
TAR636G0454 Trochodendron aralioides
THA.LOC104803803 Tarenaya hassleriana
Thecc.09G047500 Theobroma cacao
Thhalv10001956m.g Eutrema salsugineum
TPR.G12398 Trifolium pratense
TPR.G24505 Trifolium pratense
TPR.G7872 Trifolium pratense
TPR.G9691 Trifolium pratense
TWI34G1497 Tripterygium wilfordii
TWI63G0012 Tripterygium wilfordii
unitig_32.g11475 Utricularia gibba
vmacro11048 Vaccinium macrocarpon
VMungo1309G0941 Vigna mungo
Zm00001eb153580 Zea mays
Zm00001eb293710 Zea mays

User provided reference genes

Program Settings