Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28330 Brassica napus
A09p29790 Brassica napus
Aa31LG9G14650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2526 Anthoceros agrestis
Actinidia04333 Actinidia chinensis
Ah.01g012710 Amaranthus hybridus
AL6G41550 Arabidopsis lyrata
Aqoxy6G00748 Aquilegia oxysepala
Aqoxy7G04111 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.T3Z839 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UE4JHM Arachis hypogaea
AT4G08960 Arabidopsis thaliana
ATR0706G027 Amborella trichopoda
Atru.chr13.1137 Acer truncatum
AUR62017729 Chenopodium quinoa
BcaB01g02381 Brassica carinata
BcaB01g02823 Brassica carinata
BcaB01g02835 Brassica carinata
BcaC01g04745 Brassica carinata
BcaC04g20934 Brassica carinata
BolC3t15733H Brassica oleracea
BolC9t56609H Brassica oleracea
BraA03t12037Z Brassica rapa
BraA09t38542Z Brassica rapa
BraA09t38543Z Brassica rapa
C03p34240 Brassica napus
C09p37760 Brassica napus
CAN.G282.45 Capsicum annuum
CANSAT25G2089 Cannabis sativa
CARHR259970 Cardamine hirsuta
Carub.0006s2756 Capsella rubella
Ca_19393_v3 Cicer arietinum L.
CBR_g45439 Chara braunii
CDE05G0498 Ceratophyllum demersum
CDE05G3003 Ceratophyllum demersum
Cfa001645 Carpinus fangiana
Cfa013658 Carpinus fangiana
Cfa021829 Carpinus fangiana
Ciclev10001487m.g Citrus clementina
CiPaw.07G178200 Carya illinoinensis
ClCG08G011200 Citrullus lanatus
ClCG11G014220 Citrullus lanatus
COL.COLO4_12032 Corchorus olitorius
Cpa.g.sc36.160 Carica papaya
Cre13.g580650 Chlamydomonas reinhardtii
CsaV3_2G029780 Cucumis sativus L.
CsaV3_3G047600 Cucumis sativus L.
CSS0011251 Camellia sinensis var. sinensis
CSS0036827 Camellia sinensis var. sinensis
CSS0039091 Camellia sinensis var. sinensis
DCAR_002598 Daucus carota
DCAR_023183 Daucus carota
Dinv17643 Davidia involucrata
Duzib041G0230 Durio zibethinus
Duzib093G0091 Durio zibethinus
ECA236G1081 Erigeron canadensis
EL10Ac9g22979 Beta vulgaris
Eucgr.B00032 Eucalyptus grandis
FAN02G1810 Fragaria x ananassa
FAN05G1019 Fragaria x ananassa
FAN14G1039 Fragaria x ananassa
FAN18G2046 Fragaria x ananassa
FAN19G2194 Fragaria x ananassa
FAN24G1075 Fragaria x ananassa
FAN24G1342 Fragaria x ananassa
FAN24G2860 Fragaria x ananassa
FvH4_2g11953 Fragaria vesca
FvH4_4g06652 Fragaria vesca
FvH4_5g29380 Fragaria vesca
FvH4_6g23990 Fragaria vesca
Glyma.11G184601 Glycine max
Glyma.12G087751 Glycine max
Gohir.A05G224950 Gossypium hirsutum
Gohir.A06G034900 Gossypium hirsutum
Gohir.D05G227500 Gossypium hirsutum
Gohir.D06G035500 Gossypium hirsutum
Gorai.009G235200 Gossypium raimondii
Gorai.010G039500 Gossypium raimondii
GSVIVG01001056001 Vitis vinifera
GSVIVG01009057001 Vitis vinifera
GSVIVG01009068001 Vitis vinifera
HanXRQChr04g0124871 Helianthus annuus
Haze_22292 Corylus avellana
Hma1.2p1_0044F.1_g026170 Hydrangea macrophylla
HPP92_004278 Vanilla planifolia
HPP92_016361 Vanilla planifolia
Hund08631 Selenicereus undatus
Lalb_Chr03g0028011 Lupinus albus
Lalb_Chr19g0136591 Lupinus albus
Lj3g0026440 Lotus japonicus
Lj3P847T35 Lonicera japonica
Lsat_1_v5_gn_4_64561 Lactuca sativa
Manes.18G065933 Manihot esculenta
Mapoly0004s0171 Marchantia polymorpha
MBI02_g02175_MAGBIO Magnolia biondii
MBI05_g34722_MAGBIO Magnolia biondii
MCO01G633 Micromonas commoda
MD08G1227100 Malus domestica
MD15G1419400 Malus domestica
Medtr4g053370 Medicago truncatula
MELO3C003564.2 Cucumis melo
MELO3C011036.2 Cucumis melo
Migut.E00684 Erythranthe guttata
MSTRG.13678 Avicennia marina
MSTRG.2066 Avicennia marina
Nitab4.5_0000069g0120 Nicotiana tabacum
Nitab4.5_0013217g0010 Nicotiana tabacum
Nn1g05417 Nelumbo nucifera
Nn3g16512 Nelumbo nucifera
Nn5g29558 Nelumbo nucifera
Nn5g30036 Nelumbo nucifera
Nn5g30292 Nelumbo nucifera
Oeu013193.1 Olea europaea
Oeu036766.1 Olea europaea
Os06g0219800 Oryza sativa ssp. japonica
Peaxi162Scf00021g02317 Petunia axillaris
PGR031G1028 Punica granatum
PGSC0003DMG402016396 Solanum tuberosum
Phvul.011G102600 Phaseolus vulgaris
Potri.002G099000 Populus trichocarpa
Potri.005G162900 Populus trichocarpa
Pp3c1_41950 Physcomitrium patens
Pp3c2_670 Physcomitrium patens
PRCOL_00005481 Prasinoderma coloniale
Prupe.1G521000 Prunus persica
Psat7g188520 Pisum sativum
PSO541G6453 Papaver somniferum
PSO541G6503 Papaver somniferum
PSO781G0322 Papaver somniferum
QL12p037342 Quercus lobata
RcHm_v2.0_Chr1g0321971 Rosa chinensis
RcHm_v2.0_Chr7g0243401 Rosa chinensis
Rhsim09G0069400 Rhododendron simsii
Sabra02G0077800 Salix brachista
Sabra05G0123100 Salix brachista
Sc10g0006870 Simmondsia chinensis
Sed0008659 Sechium edule
Sed0021368 Sechium edule
SEGI_19435 Sequoiadendron giganteum
SEGI_24357 Sequoiadendron giganteum
SGA_v2.0_scaffold358G49840 Striga asiatica
SHI33348 Sapria himalayana
SMO329G0013 Selaginella moellendorffii
Solyc01g008280.4 Solanum lycopersicum
Sopen01g003800 Solanum pennellii
Sp6g08660 Schrenkiella parvula
TAR381G0740 Trochodendron aralioides
TAR625G1360 Trochodendron aralioides
THA.LOC104813113 Tarenaya hassleriana
Thecc.08G104300 Theobroma cacao
Thhalv10028722m.g Eutrema salsugineum
TPR.G17228 Trifolium pratense
TWI12G1022 Tripterygium wilfordii
unitig_8.g3591 Utricularia gibba
unitig_8.g3592 Utricularia gibba
vmacro15988 Vaccinium macrocarpon
VMungo1127G0933 Vigna mungo
Zm00001eb372770 Zea mays

User provided reference genes

Program Settings