Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p12690 Brassica napus
A07p09910 Brassica napus
A08p24420 Brassica napus
Aa31LG10G50 Aethionema arabicum
Aa31LG10G60 Aethionema arabicum
Aa31LG6G11730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3972 Anthoceros agrestis
AL1G44500 Arabidopsis lyrata
AL1G64510 Arabidopsis lyrata
Aqoxy5G01161 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.22KM41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DGYJ7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JWFX0I Arachis hypogaea
AT1G30475 Arabidopsis thaliana
AT1G56200 Arabidopsis thaliana
ATR0681G062 Amborella trichopoda
Atru.chr1.1924 Acer truncatum
Atru.chr2.3835 Acer truncatum
BcaB02g10507 Brassica carinata
BcaB03g13825 Brassica carinata
BcaC01g00196 Brassica carinata
BcaNung05263 Brassica carinata
BolC3t19933H Brassica oleracea
BolC4t23212H Brassica oleracea
BolC7t42015H Brassica oleracea
BraA05t20207Z Brassica rapa
BraA07t28780Z Brassica rapa
BraA08t34397Z Brassica rapa
C03p76790 Brassica napus
C04p16620 Brassica napus
C07p15110 Brassica napus
CANSAT11G1943 Cannabis sativa
CARHR029880 Cardamine hirsuta
CARHR045970 Cardamine hirsuta
Carub.0001s2869 Capsella rubella
Carub.0001s4488 Capsella rubella
Ca_12454_v3 Cicer arietinum L.
Cc10_g02580 Coffea canephora
CDE01G0461 Ceratophyllum demersum
Cfa001670 Carpinus fangiana
Cfa021890 Carpinus fangiana
Ciclev10009709m.g Citrus clementina
Ciclev10029514m.g Citrus clementina
CiPaw.01G270900 Carya illinoinensis
CiPaw.11G206900 Carya illinoinensis
CiPaw.12G140600 Carya illinoinensis
ClCG10G003880 Citrullus lanatus
ClCG10G004020 Citrullus lanatus
ClCG10G004040 Citrullus lanatus
CsaV3_3G003860 Cucumis sativus L.
CSS0013049 Camellia sinensis var. sinensis
CSS0030856 Camellia sinensis var. sinensis
CSS0048553 Camellia sinensis var. sinensis
CSS0050514 Camellia sinensis var. sinensis
DCAR_015198 Daucus carota
DCAR_019165 Daucus carota
Dinv26646 Davidia involucrata
Duzib187G1448 Durio zibethinus
Duzib213G0774 Durio zibethinus
Duzib268G0228 Durio zibethinus
EL10Ac2g03806 Beta vulgaris
EL10Ac7g17857 Beta vulgaris
Eucgr.E00269 Eucalyptus grandis
Eucgr.K00372 Eucalyptus grandis
FAN11G1489 Fragaria x ananassa
FAN16G3679 Fragaria x ananassa
FAN21G3744 Fragaria x ananassa
FAN25G2651 Fragaria x ananassa
FvH4_3g42270 Fragaria vesca
Glyma.08G332600 Glycine max
Glyma.18G074400 Glycine max
Gohir.A01G038700 Gossypium hirsutum
Gohir.A01G038800 Gossypium hirsutum
Gohir.A04G049900 Gossypium hirsutum
Gohir.D06G041750 Gossypium hirsutum
Gohir.D07G172500 Gossypium hirsutum
Gohir.D08G183166 Gossypium hirsutum
Gohir.D09G118900 Gossypium hirsutum
Gohir.D11G274650 Gossypium hirsutum
Gohir.D11G326600 Gossypium hirsutum
Gohir.D12G083501 Gossypium hirsutum
Gorai.001G066700 Gossypium raimondii
Gorai.001G244300 Gossypium raimondii
Gorai.002G035900 Gossypium raimondii
Gorai.008G093100 Gossypium raimondii
Gorai.008G148200 Gossypium raimondii
Gorai.009G401800 Gossypium raimondii
Gorai.N025400 Gossypium raimondii
GSVIVG01014742001 Vitis vinifera
HanXRQChr03g0080381 Helianthus annuus
HanXRQChr13g0408461 Helianthus annuus
Haze_09864 Corylus avellana
Haze_16864 Corylus avellana
Hma1.2p1_0193F.1_g083910 Hydrangea macrophylla
Hma1.2p1_3473F.1_g336250 Hydrangea macrophylla
HPP92_011618 Vanilla planifolia
HPP92_020495 Vanilla planifolia
HPP92_020499 Vanilla planifolia
Lalb_Chr16g0391221 Lupinus albus
Lj6g0018119 Lotus japonicus
Lsat_1_v5_gn_9_89100 Lactuca sativa
Manes.01G021500 Manihot esculenta
Manes.05G118000 Manihot esculenta
MBI07_g28243_MAGBIO Magnolia biondii
MBI15_g38535_MAGBIO Magnolia biondii
MD03G1035300 Malus domestica
MD11G1037000 Malus domestica
Medtr3g461020 Medicago truncatula
MELO3C014068.2 Cucumis melo
Migut.H01738 Erythranthe guttata
Migut.M01633 Erythranthe guttata
MSTRG.13031 Avicennia marina
MSTRG.14503 Avicennia marina
Nitab4.5_0000329g0070 Nicotiana tabacum
Nitab4.5_0000904g0010 Nicotiana tabacum
Nitab4.5_0005865g0040 Nicotiana tabacum
Nitab4.5_0006854g0030 Nicotiana tabacum
Nitab4.5_0010352g0020 Nicotiana tabacum
Nn1g08321 Nelumbo nucifera
Oeu021394.1 Olea europaea
Peaxi162Scf00359g00123 Petunia axillaris
Peaxi162Scf03243g00002 Petunia axillaris
PGR004G1013 Punica granatum
PGSC0003DMG400014846 Solanum tuberosum
PGSC0003DMG400016552 Solanum tuberosum
Phvul.006G059254 Phaseolus vulgaris
Potri.001G371500 Populus trichocarpa
Potri.011G163900 Populus trichocarpa
Prupe.6G028300 Prunus persica
Psat5g166440 Pisum sativum
PSO541G2111 Papaver somniferum
PSO675G7851 Papaver somniferum
QL08p002692 Quercus lobata
QL08p055193 Quercus lobata
RcHm_v2.0_Chr5g0075591 Rosa chinensis
SalBow1G5164 Salvia bowleyana
Sc22g0002120 Simmondsia chinensis
Sed0027009 Sechium edule
SGA_v2.0_scaffold8G04425 Striga asiatica
Solyc04g051850.3 Solanum lycopersicum
Solyc08g006050.2 Solanum lycopersicum
Sopen04g023180 Solanum pennellii
Sopen08g002020 Solanum pennellii
Sp1g26310 Schrenkiella parvula
Sp1g41840 Schrenkiella parvula
TAR627G0729 Trochodendron aralioides
TAR629G1725 Trochodendron aralioides
THA.LOC104798603 Tarenaya hassleriana
THA.LOC104826365 Tarenaya hassleriana
Thecc.07G153300 Theobroma cacao
Thhalv10008915m.g Eutrema salsugineum
Thhalv10011850m.g Eutrema salsugineum
TPR.G17935 Trifolium pratense
TWI38G1007 Tripterygium wilfordii
TWI39G1131 Tripterygium wilfordii
unitig_0.g986 Utricularia gibba
unitig_578.g16418 Utricularia gibba
VMungo0540G1151 Vigna mungo

User provided reference genes

Program Settings